Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24764 478 / 9e-165 ATMAP70-2 microtubule-associated proteins 70-2 (.1) AT1G68060 474 / 2e-163 ATMAP70-1 microtubule-associated proteins 70-1 (.1) AT1G14840 472 / 6e-163 ATMAP70-4 microtubule-associated proteins 70-4 (.1.2) AT2G01750 459 / 2e-157 ATMAP70-3 microtubule-associated proteins 70-3 (.1.2) AT4G17220 263 / 1e-82 ATMAP70-5 microtubule-associated proteins 70-5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013238 [exp] 525 / 0 AT1G24764 910 / 0.0 microtubule-associated proteins 70-2 (.1) Lus10030758 [exp] 524 / 0 AT1G24764 918 / 0.0 microtubule-associated proteins 70-2 (.1) Lus10000642 [exp] 373 / 2e-127 AT1G24764 403 / 1e-136 microtubule-associated proteins 70-2 (.1) Lus10038790 [exp] 272 / 1e-85 AT4G17220 473 / 5e-163 microtubule-associated proteins 70-5 (.1) Lus10003908 [exp] 47 / 2e-06 AT4G17220 98 / 3e-25 microtubule-associated proteins 70-5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G135100 [exp] 504 / 4e-175 AT1G24764 804 / 0.0 microtubule-associated proteins 70-2 (.1) Potri.010G106100 [exp] 503 / 7e-175 AT1G68060 751 / 0.0 microtubule-associated proteins 70-1 (.1) Potri.006G039200 [exp] 430 / 3e-146 AT1G24764 648 / 0.0 microtubule-associated proteins 70-2 (.1) Potri.016G036300 [exp] 426 / 1e-144 AT1G68060 619 / 0.0 microtubule-associated proteins 70-1 (.1) Potri.006G018000 [exp] 251 / 2e-77 AT4G17220 464 / 5e-159 microtubule-associated proteins 70-5 (.1) Potri.016G006900 [exp] 248 / 2e-76 AT4G17220 453 / 1e-154 microtubule-associated proteins 70-5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF07058 [flax] [poplar] MAP70 Microtubule-associated protein 70
Representative CDS sequence Show only first row Show all	>Lus10019171 pacid=23141795 polypeptide=Lus10019171 locus=Lus10019171.g ID=Lus10019171.BGIv1.0 annot-version=v1.0 ATGGGTACTGGGCCATATGTTGCCTTGCTTTTTGGTGTTTGGGCCAATCAATTTGAGGAAGATTATGCTTTCTTACACACTAATGATGTAGATTCATTTG CAGCTGAAGCTTCTCTTAGAAGAAGACATGCTGCTCAAAAGGATGATGATATGCCTCCAATTGAGGCTATTCTTGCTCCTCTAGAGGCTGAGCTGAAGCT TGCTTGTCAAGAGATTGCGAAACTGCAAGATGACAACAAGGCGTTGGACCGTCTCACCAAGTCGAAAGAAGCTGCCTTGCTTGAAGCTGAGAGGACTGTT CAGGTTGCCATGGCTAAGGCCTCCATGGTGGATGACCTCCTAAATAAGAACCAGGAATTGATGAAGCAGATAGAAATATGCCAGGTTGTGGAGGTTGAAA AACTTACGCAAACTGTTAGGGAACTGGAGGAGGCTGTCCTTGCTGGTGGTGTTGCAGCCAATGCTGTGAGGGATTACCAGCGGAGAGTTCAAGAGTTGAA TGAGGAAAAGAAAATGTTAGAACGAGAATTGGCTCGGGCGAAGGTAAATGCTAACCGGGTTGCAACAGTAATAGCAAATGAGTGGAAGGATTCTAACGAC AAAGTGATGCCTGTAAAGCAGTGGTTTGAAGAGCGTAGATTTTTACAGGGAGATATGCAGCAACTTCGCGACAAACTCACCATAGCTGAGCGAACCGCAA AATCTGAAGCACAGCTGAAAGATATGGTTCTAAAAAGGGTATGCTTTGTCATTGCAGGAGAAGTATCAGATGGGAGGAGTGCGAGTAATGGGCCATCTCG GCGCCAATCCTTGGGCGGAGCTGATAACCTCCTAAAATATACTTCAAATGGATTTCTGCCCAAGAGATCGCCTTCCTCCATAAGAGCTTTGTCTTCTAGT ACCAGTGCTGTCTTGAAGCATGCTAAAGGGACATCCAAATTGTTTGATGGCGGCACAAGATCACTTGACCAGCCTTCAGCGGTTTCAAACAATACATTGG CTTCAAATCCAGATGATAAGCCAACTGACTTTCCACCGGCACATAAAGAAGATAGTGTTCCTGGAATGTTGTATGATTTGTTGCAAAGAGAGGTCGTTGC TTTGAGGAAAGCCGGTAATGAAAAAGATCAAACCCACAAGGATAAGGATGATGCGCTCGAGGTTAAACACTTAACCTCCCCGTCTTTTCTTTTCATTGCA AAGAAGGTAGAAACGTTGACAAAGGCTATGGCGGTTGAGGCAAAGAAGATGAGAAGAGAAGTAGCTGCAATGGAGAAGGAGGTTGCTGCTATGAGTGGAG AAACATCACGAAAATAG
AA sequence Show only first row Show all	>Lus10019171 pacid=23141795 polypeptide=Lus10019171 locus=Lus10019171.g ID=Lus10019171.BGIv1.0 annot-version=v1.0 MGTGPYVALLFGVWANQFEEDYAFLHTNDVDSFAAEASLRRRHAAQKDDDMPPIEAILAPLEAELKLACQEIAKLQDDNKALDRLTKSKEAALLEAERTV QVAMAKASMVDDLLNKNQELMKQIEICQVVEVEKLTQTVRELEEAVLAGGVAANAVRDYQRRVQELNEEKKMLERELARAKVNANRVATVIANEWKDSND KVMPVKQWFEERRFLQGDMQQLRDKLTIAERTAKSEAQLKDMVLKRVCFVIAGEVSDGRSASNGPSRRQSLGGADNLLKYTSNGFLPKRSPSSIRALSSS TSAVLKHAKGTSKLFDGGTRSLDQPSAVSNNTLASNPDDKPTDFPPAHKEDSVPGMLYDLLQREVVALRKAGNEKDQTHKDKDDALEVKHLTSPSFLFIA KKVETLTKAMAVEAKKMRREVAAMEKEVAAMSGETSRK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24764		ATMAP70-2	microtubule-associated protein...		Lus10019171 [exp]	0	1
AT3G28050			nodulin MtN21 /EamA-like trans...		Lus10039426 [exp]	2.6	0.8002
					Lus10013898 [exp]	6.0	0.8478
AT4G01410			Late embryogenesis abundant (L...		Lus10012605 [exp]	6.6	0.8397
AT1G48480		RKL1	receptor-like kinase 1 (.1)		Lus10010973 [exp]	12.6	0.7956
					Lus10011723 [exp]	12.8	0.8153
AT1G53570		MAPKKK3, MAP3KA	MAP KINASE KINASE KINASE 3, mi...		Lus10000829 [exp]	13.2	0.7858
AT3G48460			GDSL-like Lipase/Acylhydrolase...		Lus10002389 [exp]	15.0	0.8099
AT1G66150		TMK1	transmembrane kinase 1 (.1)		Lus10019131 [exp]	15.6	0.7875
AT3G23880			F-box and associated interacti...		Lus10010910 [exp]	16.4	0.8068
AT3G47640	bHLH	PYE, bHLH047, P...	POPEYE, basic helix-loop-helix...		Lus10042194 [exp]	17.5	0.7732

Compare expression of checked genes

Lus10019171 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.