Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011721 [exp] 40 / 5e-05 AT3G49780 53 / 3e-10 phytosulfokine 4 precursor (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10019272 pacid=23141363 polypeptide=Lus10019272 locus=Lus10019272.g ID=Lus10019272.BGIv1.0 annot-version=v1.0 ATGGCTTCAAATGTTAAGGTGATTACCACCTTCCTCCTCCTCCTCCTCTTCAGCCTCTTCGCCTCCGCAGTCCGGCCCGATCTTGCCGGAGTAGTTCCGC TAGCTCCGGTAGTAGCTCCCACCGACTTGCCTCTTTCCTTTGTCGGTTCCGACGGCCACAATTTCGACCCTATGGTCGACCGGGGCGATCCCGAATCCTT TGCCGTCAGCAGCTCCCACAAGTCCGTGGAAGGGCACGACATGGTTGAGCAGGATCTCTGCGAAGGGCTGGGAGAAGAGGACTGCTTGACGAAAAAGCCA TGGAAATTTTGA
AA sequence Show only first row Show all	>Lus10019272 pacid=23141363 polypeptide=Lus10019272 locus=Lus10019272.g ID=Lus10019272.BGIv1.0 annot-version=v1.0 MASNVKVITTFLLLLLFSLFASAVRPDLAGVVPLAPVVAPTDLPLSFVGSDGHNFDPMVDRGDPESFAVSSSHKSVEGHDMVEQDLCEGLGEEDCLTKKP WKF

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10019272 [exp]	0	1
AT1G55910		ZIP11	zinc transporter 11 precursor ...		Lus10004413 [exp]	1.4	0.8923
AT1G47750		PEX11A	peroxin 11A (.1)		Lus10029260 [exp]	2.6	0.8998
					Lus10023370 [exp]	5.2	0.8913
AT5G13810			Glutaredoxin family protein (....		Lus10039537 [exp]	9.0	0.8706
AT3G16210			F-box family protein (.1)		Lus10023372 [exp]	9.8	0.8723
AT1G27730	C2H2ZnF	ZAT10, STZ	salt tolerance zinc finger (.1...		Lus10033798 [exp]	14.1	0.8533
AT3G57450			unknown protein		Lus10042063 [exp]	19.1	0.8479
AT3G07870			F-box and associated interacti...		Lus10038606 [exp]	19.8	0.8730
AT1G33800			Protein of unknown function (D...		Lus10034373 [exp]	21.4	0.8776
					Lus10029977 [exp]	26.2	0.8750

Compare expression of checked genes

Lus10019272 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.