Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G48190 3331 / 0 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) AT5G40820 256 / 1e-67 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT1G50030 143 / 2e-33 TOR target of rapamycin (.1.2) AT2G17930 59 / 1e-07 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT4G36080 57 / 3e-07 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT5G09350 50 / 2e-05 PI-4KBETA2, PI4KBETA2 phosphatidylinositol 4-OH kinase beta2 (.1) AT5G64070 50 / 4e-05 PI-4KBETA1, PI4KBETA1 phosphatidylinositol 4-OH kinase beta1 (.1) AT1G60490 47 / 0.0003 PI3K, ATVPS34 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10043339 [exp] 554 / 6e-176 AT3G48190 321 / 5e-96 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10000064 [exp] 298 / 1e-92 AT3G48190 248 / 2e-76 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10025091 [exp] 213 / 2e-54 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10043340 [exp] 184 / 6e-54 AT3G48190 137 / 7e-39 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10023991 [exp] 210 / 1e-53 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10037246 [exp] 147 / 1e-34 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 145 / 3e-34 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10023840 [exp] 134 / 9e-31 AT1G50030 239 / 2e-62 target of rapamycin (.1.2) Lus10028458 [exp] 57 / 3e-07 AT2G17930 6325 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G076650 [exp] 3983 / 0 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.004G179000 [exp] 208 / 3e-53 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.001G289200 [exp] 139 / 2e-32 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.009G084500 [exp] 139 / 3e-32 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.004G147800 [exp] 128 / 5e-29 AT1G50030 252 / 2e-66 target of rapamycin (.1.2) Potri.005G114300 [exp] 62 / 7e-09 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G057850 [exp] 59 / 5e-08 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G109000 [exp] 51 / 2e-05 AT5G64070 1412 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1) Potri.005G059000 [exp] 50 / 2e-05 AT5G64070 1497 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1) Potri.012G075100 [exp] 47 / 0.0002 AT1G60490 1388 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF02260 [flax] [poplar] FATC FATC domain CL0020 [flax] [poplar] TPR PF02259 [flax] [poplar] FAT FAT domain CL0016 [flax] [poplar] PKinase PF00454 [flax] [poplar] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase
Representative CDS sequence Show only first row Show all	>Lus10019489 pacid=23181527 polypeptide=Lus10019489 locus=Lus10019489.g ID=Lus10019489.BGIv1.0 annot-version=v1.0 ATGGTCACTTCAAGAGACGTTCAGGAGATCGTCTCCAAGCTTTCCTCGGATAAAGCCAAAGCGCGAGAAGATGGAATAAAATTGTTAAATACATGGTTAG AAGGTGAAAGATCGATAAGATTTTGTAATTACCTCTCAGAGAACACCATGAAGCTCAATCCAGATGAAATACCTCACGCTGAAACATGGCCTTACCTGAT TACATTACTCCTCCAGTGCGTGTCGTTAGAAATATCATCAAGCAAAAAGCGTTTCCCAAAGTTGACGTACGCAAAAACGCTACGCATTGTGGTCCAGCGA TCAGAAGATGTTAAATTCTCAGGCAAGATGCCAGTTCTGCTACCGGTGGTTAAAAGCCTTTTTAATCACCTTTGGGATGTACTGAGCAGTGTTCCAAGCT TTCAGGCAGAATATGGAATTATTCTTCGTCTTCTATTGAGCATTGGAGACTATAGGTTTCACTTGAGGAAAAAAATTTATTCTAGCCTCATCCATTTCTA CATTGAGAGGGTGGAAACAACTTTAAGCGAGGAAAATGATAGCCACTGTGTTCCAAGGGAGGAGGTTTTCCGTTGCATTACGACTCTACATTCCCTTCTT GAGAATCCTCCAGGTGACTTGGCAGACGATGTTAGAGGGGATATTGCTAAAGGGTTGGTTCAGATGTTCTCTTATGTAAGGGAGGAAAGCAAGATATCTC GCAAACTTATGGAATGTGTTAATGTGTACTTGTTGAACAATGGCCCTAACTTGAGCTGGGAATCCTTAGAGATTCATAGTGCTGTGCGCAATTTTGTATT CCGCTGTTGGCTTACTACACGAGATCATGGCCTCAAGGATACTCTTATATTGTATTCAAGATTACAGCTAAACTTAAGTCGGGGTGATCTTGAAGGAAGT TCTTTGGTAGAAGAACTTTTGGATGTGATATGCAAAGAATTAGATCAAGGTAGCCTGCCAATTGCAGGGGTGTCATGGACAGATGCAATGAAGGATGATA AATGTGAAGTCTTAAGTGGATCACAGTATTGCTTGGTGGAACTTTCAGCTCTGGTGTTATATCGGGCTTGTGTTAGTACAGTTAGAGCTCCAGTAGCTGA AAAGCGTGTAAAGAGGGACCACATTTGTGTAATTGTAAAGGAAGCACTTGCAGGGGGGAAATGGTTATGGCATGCGGCTTTTTGCCATCTCATTCGAACC TACTACAGTCGAATGAGTGAAGATCTTTTCATTAAATGGTTCGAAGGGATCTCGTTGAACTTTGAAAGGATTATGGGTGATGCAAATATGGGGCATGCCT ACGATGGTTTGCTTTGGACCTTGAGGAGTTTGCAGGACCTGTGTACTGTTTTGCTGCATATTAAGCCTGAATCAGAGATCTCAAGATCCTCTTTCATCTC TGAAAAGGTGGAGAAAGGGTGGCAATTAATATGGAACTGTGTAATGCAGGGGTTGCCAGTATTCAGTAATCAAACTTTGGTTGTTGATGCGGCTTTAGTT CTTCTGGGAAACATCATAGCAAGTGAAATCACAAGAACATGTCTTGTACCTCAAGATATATGGGACCTGAAGTTGTATAAGCGAATTCCATCATTGTCCT TTTTGTTCTTTGTTTCTTGCTATTATTCGCACCAAAGTTGGCAAGGAAACCTTATGGATACTGTGCATCTTAGAAGGAATCTCTTAAGAGCTGTTCTGGG CTGCCTGGACTTGAAGGACTCTTCGTCTCTGAATGAGCTTACCGTCCGCTTGATACCATCAGCTGGTTATGCTCTTTCCGCTGGTTATGCTCCATTCATG CCTTGTTACCAGGCACTTCTCCCGTTGCATTCTTCTAATAATGTTTGGGATAAGTTAGGTGAGTCGGACCTTCGAAGACCGCATGAACTCTTTGAATGCT TTGCTGAAGTTCTTGCCCAAATTAATGAATCCAAAACCAAGGTTTATCCTTATGCTCGACATCACGGTGTGCGTCTTCCTTACAAATTTAAGGATTCACT TTTGGATGAGATGGAGACACACATTCTTAAAGCATTTATAGATATTGAGGCTAAAAATATGCCTCTCTCTGATGTCTTCTTCATATGTGCTGCAGTATGC AATTTTATGCAGGGTTCATTTGCTACGAGGGGTGAAGGTTCATCTTTTATTTCTGAATCTGGACATGTTGTGTCACAATTGTTGAATCATGCTGCTAGTG TAATTTTAGAAGGTGGCTCGGACTTGCAGTCTCTTGGTTATGTTGATGACGGTGCGGAGAATGCTATCAACAAAGCTTTTTTGGATTCACTTACAAGCTT TTTTTGCTCTCCCATCTTTGCCAAAGTGGAACATAGAAATTTTCTAGATTCTACTATCTACAATACCATAGTTCAATCAGTGGAGAACGTCCTGAAGAAC CTTGCTAAATTATATGAGAAGCATTCTCAACTGTGGCTGCTCGATTGTTCTGCATCTGACACTGATCTACGAATGCCTAAACCACTCAGTGGTGATAGAA GTAGGATCGTGGACATGGAACTAGATATCAGCGGGGATATGAAAGATGAAGATATGTTATCAAAAAGTGGAAATGTTGGATCTGCAAAGTCCTTTTCTGT TATCACCTGGAAGTTGCACATGATCTCTCTTATGTCGAGCTTCTTCCAAATTTCGGAACGTTTTGCATGGGATATATTGTTTGAACTATTAGGCCGAGAA TGTGAATCGAAGGTGCGCGAGAAGATCATTTACCATCTTTGTCAGCATCCACATATGTCGTCTCTTGCAAAAGTTACAGGCTTGGTCAAAATATTGAATG AATTGCTTGACAAAAGGATTAATCTCAAGCTTGATTGCAGTTTTATTTTAGTTGCCACTCATCAAATGTTAATTAAGTTAGCCTCCTCGGATGCTGTTTG TACAGATGATGATCAATCTTTGATAAGAGAATCTGAATCGAGCTTGGTGCATTTTGGAAACCTAGTTAACAAAGTTGCAGATTTTGGTCTTCTGGATTGG CTGGGGCGTATCAAGCTAGTTGATTGCATATGTGATTTTGTTGTCCTGGACCCTCTAATTGGTCAGACTATGATCGAGAGATTGTTCTTATTGGTTCAAA ATCCTGACTACAGAGTCCGACATTTTGTGGGTCAACGAATTGGTGTTCTATTTCAAACATGGGATGGTCATGATGAACTTTTTGAGGACATTTGTTCAAA TTTTGGCGTCGTGATAGTGCTCCCGTTGAAAGGAAAACTTGTGACCGCAAATCAGGTAATTTCTACTGGTCCTCAGCCTGTTCCAGCTATGGAGACAGTG ATTATTACTCTTATGCACCTTGCTTTGCATAGCGAGAAAGTGGAGTCAAAGGCTGTTTTCATATTATGTGCTATTTCTGCTATTGAGCCTTGCCAAAGGG AGTTGGTCACTGCCGTGCTCAATAATCTATCAAAGCAACTTCAGTATACAACTAGATTCAAGTATCTGGAGGAATCCATGGGATCGATTCTCTTCAGCTG GATTGCTTGCGGTGTTAATTTGATTTCACTTCTTGAGATAAGGCAACTTCTCGTATCAGACGTGGAACCAAGAAATTTTATACAATACTCTTGTAGTTGG CTGCTTCCGGCTTTGCTACTTCAGAAGGACATGTCCAACCTTAATTGGCTAGCTAAAGTCTCAGGTCAATCTTTGGCAGCTCTAGTCAAAAGTTACTTTG TGCCTATATTTTCAGTTAGTATGGCATTACATTGCAGTAAGATGAGTGGTTGGGAAAACGGGACCTTTGTGCTTGAGAATTCTATTCTACAAATGGCTGA GATATCTGAAAATGAAAGAGACAAGCTCATAAAGAAACACATGGTATCTATTGTCGGCCACATGTTATCCCTTGTTTCTTGTGCACCAGAGCCTGCAGTT CCTTTGTTTCATAAAGATGGAATATCACAGGCAATTCGAACTGTAGTGGATGGATTCTTGGAAATAGATAATCATCCAGCGAGTGGTGCTGTTCTTGACA AGATCAACATTTTCCGTCCAGATAGAGTTTTCATGTTCATATTGGAAATACATTACAAACTAGCAGCAGCAGTTCATCCTAGGCACAGGTGTCACAGGAT GGCTGCACTCGAAGTGCTCATTGATGTTCTTGGTCATCGAGTTGCTATCTCGGGCACAGCCACCTATCTTCTCAATTTGATGGGACAATTCATTGACACC AAAGCTTTACAAGATCAAAGTTGCCGCATAATCTCTTGTTTGCTATTAACTTTTGAAGAAAACCCATCTGAAGTCATTTTCAATGTGCAGGGCGATCAGC TTCAGTTTTTGGTCGCAAAGTTGGTAGGATGTTGCATGGACATTCTAACCATTAAGGGATCTTCTGGAGCTACATCATCTTCAGTTTTTGCTTTGCTCCG CCAATTGGTTGTCAAATCTGACCCGTTGCTTCACGATTATGTTAGAGAGTTGGAGCCATTCCCCGAGAGAATTATCTTTAAAGAGATGCAAGAGTTTCAT AAAGACTTATGCCATACATACTGTCCAAGAAATCACTTGTTGAAGTTTGCAAAGAGATCTTGTTACCTACCACCCAGATTACTTCTGTCCAGTATCCAAG CACTGCACAAGAAAGTGCTCCTTGGAGAAAATTATCAGGTGGAAGGAAATGGTAAAGATATCATGGATGATAATTGGAATCATGATCAGGAAATTCGTTG TGCAATCTGGAGGCTAGTTGGCATTTGTAGTTCAGATGACTCAGGAAGCATCAGAGCCTTGGTTTCTGATTTTGTATCTCGGCTTGGTGTTGGGGAGCCA CACAGTGTTGTATTTCATTCTGCTAGGGAGTTCAATCAGAGGAAAATACTACAGAGCAGTTCAGAGACTGGTAGTGGAATCAGTTCCGGAATATCTGAGG ATCTCCTGCTTGCACTGCTTAGGCTCCTACAGAAGTATTTAATGGATGATAATATTAGAATCATTGATATGGCATCCCAAACCCTTCGCGGCATTCTTTC TACTGAAAAGGGTCAAAGAGCTGTACTTTCATTTGATTCATATGAGAGGTCACTAATTGAGATCCACTCCAAAGGTGTAGACACTGAAGTGGTGGAAAAG TTCATGGCAGATTTTGAAAAAAAATATAAAGCTGAAGCAGTTCCACTCGATGATTCTAGTTTATGGAACACAAGCAATAAAAGCTTTGAGATGTGGATTT GCCCACTTGTGTATTCGATGCTAGGTTTCTGCGAGGATGTCATTTTAAGATTATGCCAGGGAATTGTTTTGTTCAAAGCAGAGGCTGCTGAGCTTCTATT TCCGTGTGTGATTGTAGATATATCTAAAAGAAAAGATATATGTGTTGATCTTCAAAAGTTAATAACTCAGCAGGTACAGCAACATATATTCAAACAATCC AATGTGCTGGTAAAGTCAATCCAAGTCTTCTTGAATGCACTTAATGAACTTCGCATGTGTCATGTCCTCGGAAGGTCTTCAATAGAACAATCAAAGCAGG AAGCTTCTGGAAAGGTTAAAGACTCATTTGGTAGTTCAAGTCCCTCGACAAAACCTGCACTTCTATGGGATAAGGTTTACTGGCTGACTATTGATTATCT TCTTGTTGCTAAGGCAGCAGTTATCTCTGGCTCGTATTTTACATCTGTACTGTATGTTGAACATTGGTGTAAAGAGCATTTTGGAGGTCTTACCCTAGGA GCTGCAGATTTTTCTCATGTGGAGGAGTTATCGGAGCACATTGAAATTCTTGTATCTGCTCTCACTCAAATAAATGAACCAGACAGTCTCTATGGAATCA TCCAGTCCCACAAGTTGACGTCTCAAGTAGTTACCTTTGAGCATGAGGGGAATTGGAGCAAGGCTCTCGAACATTATGATTTACAAGTTCGTTCAAATGC CATGCTTCAACCCGGTGCGGATTCCAGTATGGCCCTGGTGAAAAATTGCCAACTGGACGACCATGTACCCCTTTCCTCGATTCATGATGAAATGAACCAG CGGAAACCTTATAAAGGGCTGATTAGATCACTGCAGCAAATGGGATGTACACATGTATTAGACCTTTACTGCCAGGGTTTGACTTCTCGAAAGGATCAGT TACAGCATGATTTGGAATTCAACGAATTGCAGTATGAGGCTGCATGGAGGGCTGGGAATTGGGATTTTTCTTTCCTGTCACATGGACCAAATTCAGCTTC TCGTCAACTTATCAAAACTGATCAGTTCCATCAAAATTTGCACTGCTGTTTGAGGGCATTGCAAGAAGGAGATTCTGATGAATTTTGTAGAATCTTGGAA GTATCAAAGCAGGGGCTGTTATGTTTGGTGTGTTGTGCCAGTGAAGAGAGTACTCAATATATCTTCTCGACTATCATTAAACTTCAGATTCTATATCATC TAGGCATGGCTTGGGGTGTAAGGTGGAAACTCTATCCATGTAATAGCGCTGAGACCTACCTCGTAAAGCAAAAAAAGTGTATGGAACCCCAAATCCCTAC TTCGGAGCAGCTCTCCCTGATGAATAAGGACTGGAGCTCTACTTTGGAACAGACGCAGCTGCACATGAATCTAATAGAACCATTTATAGCATTCAGGAGA GTTTTGCTTCAGATCTTAGGTTGTAAAGAAAGCTCAATGCAGCATCTGTTGCATTCTGCTTCTAGTCTTCGCAAGGGTTCCAGGTTTTCCCAGGCAGCTG CTGCTTTACACGATCTGAAATGTTTCTGGGATAGGACTGGAGAACCATCTTCCTCTACGTACTGGCTTGGGAGGCTTGAAGAAGCAAAGTTACTCCGCGC CCAGGGTCGGCATGAAATGGCCATCAGCCTTGCAAAGTATGTCTCAGCCAATTATCATTCAGGTGAAGAAGCTTCTGATGTGTATCGCTTGGTTGGGAAG TGGCTAGCTGAAACTAGATCTAGCAGTTCAAGAACTATTTTGGAGAAATATCTGAAACCTGCAGTTTCACTAGCTAAGGATCACAAGTTCACCAACAAGA AGTCCACAGAAAGACGAAGTCAGGCTCATTTTCATCTTGCACACTATGCTGATGCTCTGTTTAGATCATATGACGAAAGACTAACCTCAAGTGAATGGCA AGCAGCAATGAGATTGCGGAAACACAAGACTTTTGAGTTGGAGGTCCTTGTTAAGCGGTTTAAGAGTTCTTCAAAGGGCGAAAAGGTGGATTATCAATTG AAAATACAGGAGTTGCAGAAGCAACTTGCAATGGACAAGGAAGAGGCTGAAAGACTTCAGGATGACAGAGACAACTTTCTCAGCCTATCACTGGAAGGAT ACAATCGTTGTTTGGTCATAGGCGACAAGTATGATGTACGAGTGGTGTTTCGACTTATTTCCCTGTGGTTTAGTATGTCTTCTCGAGAAAAAATAATCAG TAATATGCAGCAAGTAATTCATGAGGTTCAATCCTACAAATTCATACCGCTTGTATATCAAATTGCTTCAAGAATGGGGAGCTCAAAAGACAATACAGGG CCTCATGGTTTTCAGTCTGCTTTGGTTTCTCTTGTGAGGAAGATGGCCATAGACCATCCGTATCATACAATTTTCCAGCTTCTAGCATTGGCAAATGGGG ACCGTATCAAGGATAAACAACGGAATAGAAACTCTTTTGTGGTTGATGTGGATAAAATACTTGCAGCGAAGCATCTTCTTGAAGAGTTATTATCATACCA TGGTCAAGTTATCAGACAAATGAAACAAATGGTGGACATCTATATTAAACTTGCGGAGCTTGAAACAAGGAGAGAGGATACAAACAAAAGGATACCTCTT CCAAGAGATATTCGCAGTGTTCGTCAACTTGAACTTGTACCAGTGGTAACCGCCAATTTTCCAGTTGAACGAAGTTGCCAATATCTTGAAGGTTCATTTC CACACTTCAGAGGTCTAGCAGATTCAGTAATGGTAATGAATGGTATCAATGCTCCAAAAGTTGTTGAATGCTTAGGTTCTGATGGGAAAAGATACAGACA GCTTGCCAAATCTGGAAATGATGATCTAAGACAAGATGCGGTTGTTCCTTTTACACCAAGTGCTGGCGTCCTGGAATGGGTTAATGGCACACTGCCTGTT GGAGAATATCTTATAGGAAGCACGAGGAATGGTGGTGCCCATGGCCGCTATGGATCTGGGGACTGGTCATTTCTGAAATGTCGAGAGCACATGGCAAATG AGAAGGACAAACGCAATGCATTCCAGGAAGTTTGTGAGAACTTCAGACCAGTTATGCATCACTTCTTTTTGGAGAGGTTTCTGCTGCCAGCTGACTGGTT TGAGAAGAGACTTGCTTACACGAGGAGTGTTGCTGCAAGTTCAATGGTTGGTTACATTGTTGGGCTCGGTGACCGGCATTCAATGAACATCCTAATTGAT CAGGCTACAGCAGAAGTAGTACACATTGATCTTGGAGTCGCCTTTGAGCAAGGATTAATGCTGAAAACACCTGAGCGGGTTCCCTTCAGACTTACAAGAG ATGTCATCGATGGAATGGGTGTTACAGGAGTTGAAGGTGTTTTCCGCAGATGTTGTGAAGAAACTCTCTCTGTGATGCGCACGAATAAAGAAGCACTACT GACCATTGTCGAAGTGTTTATTCATGACCCTTTATATAAATGGGCGTTGTCTCCTCTGAAAGCCTTACAACGCCAAAAGGATACTGATTATGATCTGGAG ACAAGTATGGAAGACTCGGATGATGGAAGCGAGGGGAACAAGGATGCCACTCGGGCGCTACTGCGAGTGAAGCAAAAGCTAGATGGCTACGAAGAAGGGG AACTGAGAAGTGTGAATGGACAGGTTCAGCAACTGATTCAAGACGCTATTGATTCGGAGCGTCTGTGTCAAATGTTTCCAGGGTGGGGAGCTTGGTTGTA G
AA sequence Show only first row Show all	>Lus10019489 pacid=23181527 polypeptide=Lus10019489 locus=Lus10019489.g ID=Lus10019489.BGIv1.0 annot-version=v1.0 MVTSRDVQEIVSKLSSDKAKAREDGIKLLNTWLEGERSIRFCNYLSENTMKLNPDEIPHAETWPYLITLLLQCVSLEISSSKKRFPKLTYAKTLRIVVQR SEDVKFSGKMPVLLPVVKSLFNHLWDVLSSVPSFQAEYGIILRLLLSIGDYRFHLRKKIYSSLIHFYIERVETTLSEENDSHCVPREEVFRCITTLHSLL ENPPGDLADDVRGDIAKGLVQMFSYVREESKISRKLMECVNVYLLNNGPNLSWESLEIHSAVRNFVFRCWLTTRDHGLKDTLILYSRLQLNLSRGDLEGS SLVEELLDVICKELDQGSLPIAGVSWTDAMKDDKCEVLSGSQYCLVELSALVLYRACVSTVRAPVAEKRVKRDHICVIVKEALAGGKWLWHAAFCHLIRT YYSRMSEDLFIKWFEGISLNFERIMGDANMGHAYDGLLWTLRSLQDLCTVLLHIKPESEISRSSFISEKVEKGWQLIWNCVMQGLPVFSNQTLVVDAALV LLGNIIASEITRTCLVPQDIWDLKLYKRIPSLSFLFFVSCYYSHQSWQGNLMDTVHLRRNLLRAVLGCLDLKDSSSLNELTVRLIPSAGYALSAGYAPFM PCYQALLPLHSSNNVWDKLGESDLRRPHELFECFAEVLAQINESKTKVYPYARHHGVRLPYKFKDSLLDEMETHILKAFIDIEAKNMPLSDVFFICAAVC NFMQGSFATRGEGSSFISESGHVVSQLLNHAASVILEGGSDLQSLGYVDDGAENAINKAFLDSLTSFFCSPIFAKVEHRNFLDSTIYNTIVQSVENVLKN LAKLYEKHSQLWLLDCSASDTDLRMPKPLSGDRSRIVDMELDISGDMKDEDMLSKSGNVGSAKSFSVITWKLHMISLMSSFFQISERFAWDILFELLGRE CESKVREKIIYHLCQHPHMSSLAKVTGLVKILNELLDKRINLKLDCSFILVATHQMLIKLASSDAVCTDDDQSLIRESESSLVHFGNLVNKVADFGLLDW LGRIKLVDCICDFVVLDPLIGQTMIERLFLLVQNPDYRVRHFVGQRIGVLFQTWDGHDELFEDICSNFGVVIVLPLKGKLVTANQVISTGPQPVPAMETV IITLMHLALHSEKVESKAVFILCAISAIEPCQRELVTAVLNNLSKQLQYTTRFKYLEESMGSILFSWIACGVNLISLLEIRQLLVSDVEPRNFIQYSCSW LLPALLLQKDMSNLNWLAKVSGQSLAALVKSYFVPIFSVSMALHCSKMSGWENGTFVLENSILQMAEISENERDKLIKKHMVSIVGHMLSLVSCAPEPAV PLFHKDGISQAIRTVVDGFLEIDNHPASGAVLDKINIFRPDRVFMFILEIHYKLAAAVHPRHRCHRMAALEVLIDVLGHRVAISGTATYLLNLMGQFIDT KALQDQSCRIISCLLLTFEENPSEVIFNVQGDQLQFLVAKLVGCCMDILTIKGSSGATSSSVFALLRQLVVKSDPLLHDYVRELEPFPERIIFKEMQEFH KDLCHTYCPRNHLLKFAKRSCYLPPRLLLSSIQALHKKVLLGENYQVEGNGKDIMDDNWNHDQEIRCAIWRLVGICSSDDSGSIRALVSDFVSRLGVGEP HSVVFHSAREFNQRKILQSSSETGSGISSGISEDLLLALLRLLQKYLMDDNIRIIDMASQTLRGILSTEKGQRAVLSFDSYERSLIEIHSKGVDTEVVEK FMADFEKKYKAEAVPLDDSSLWNTSNKSFEMWICPLVYSMLGFCEDVILRLCQGIVLFKAEAAELLFPCVIVDISKRKDICVDLQKLITQQVQQHIFKQS NVLVKSIQVFLNALNELRMCHVLGRSSIEQSKQEASGKVKDSFGSSSPSTKPALLWDKVYWLTIDYLLVAKAAVISGSYFTSVLYVEHWCKEHFGGLTLG AADFSHVEELSEHIEILVSALTQINEPDSLYGIIQSHKLTSQVVTFEHEGNWSKALEHYDLQVRSNAMLQPGADSSMALVKNCQLDDHVPLSSIHDEMNQ RKPYKGLIRSLQQMGCTHVLDLYCQGLTSRKDQLQHDLEFNELQYEAAWRAGNWDFSFLSHGPNSASRQLIKTDQFHQNLHCCLRALQEGDSDEFCRILE VSKQGLLCLVCCASEESTQYIFSTIIKLQILYHLGMAWGVRWKLYPCNSAETYLVKQKKCMEPQIPTSEQLSLMNKDWSSTLEQTQLHMNLIEPFIAFRR VLLQILGCKESSMQHLLHSASSLRKGSRFSQAAAALHDLKCFWDRTGEPSSSTYWLGRLEEAKLLRAQGRHEMAISLAKYVSANYHSGEEASDVYRLVGK WLAETRSSSSRTILEKYLKPAVSLAKDHKFTNKKSTERRSQAHFHLAHYADALFRSYDERLTSSEWQAAMRLRKHKTFELEVLVKRFKSSSKGEKVDYQL KIQELQKQLAMDKEEAERLQDDRDNFLSLSLEGYNRCLVIGDKYDVRVVFRLISLWFSMSSREKIISNMQQVIHEVQSYKFIPLVYQIASRMGSSKDNTG PHGFQSALVSLVRKMAIDHPYHTIFQLLALANGDRIKDKQRNRNSFVVDVDKILAAKHLLEELLSYHGQVIRQMKQMVDIYIKLAELETRREDTNKRIPL PRDIRSVRQLELVPVVTANFPVERSCQYLEGSFPHFRGLADSVMVMNGINAPKVVECLGSDGKRYRQLAKSGNDDLRQDAVVPFTPSAGVLEWVNGTLPV GEYLIGSTRNGGAHGRYGSGDWSFLKCREHMANEKDKRNAFQEVCENFRPVMHHFFLERFLLPADWFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILID QATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDVIDGMGVTGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKDTDYDLE TSMEDSDDGSEGNKDATRALLRVKQKLDGYEEGELRSVNGQVQQLIQDAIDSERLCQMFPGWGAWL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G48190		PIG1, ATATM, AT...	pcd in male gametogenesis 1, A...		Lus10019489 [exp]	0	1
AT3G11910		AtUBP13, UBP13	ubiquitin-specific protease 13...		Lus10034130 [exp]	2.0	0.9099
AT1G50030		TOR	target of rapamycin (.1.2)		Lus10037246 [exp]	3.2	0.9166
AT1G01040		SIN1, EMB76, EM...	SHORT INTEGUMENTS 1, EMBRYO DE...		Lus10030176 [exp]	4.9	0.8866
AT3G24870			Helicase/SANT-associated, DNA ...		Lus10011850 [exp]	5.2	0.9017
AT5G23150		HUA2	ENHANCER OF AG-4 2, Tudor/PWWP...		Lus10017398 [exp]	8.7	0.8995
AT3G01320		SNL1	SIN3-like 1 (.1.2)		Lus10014504 [exp]	9.2	0.8908
AT1G67140		SWEETIE	SWEETIE, HEAT repeat-containin...		Lus10033549 [exp]	11.6	0.8778
AT2G25730			unknown protein		Lus10007687 [exp]	11.8	0.8927
AT2G25170		CKH2, SSL2, GYM...	SUPPRESSOR OF SLR 2, GYMNOS, C...		Lus10005339 [exp]	14.0	0.8569
AT4G32820			Tetratricopeptide repeat (TPR)...		Lus10007462 [exp]	15.0	0.8579

Compare expression of checked genes

Lus10019489 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.