Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G54855 208 / 7e-70 Pollen Ole e 1 allergen and extensin family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003874 [exp] 232 / 2e-79 AT5G54855 213 / 2e-72 Pollen Ole e 1 allergen and extensin family protein (.1) Lus10001821 [exp] 222 / 1e-75 AT5G54855 219 / 1e-74 Pollen Ole e 1 allergen and extensin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G137100 [exp] 214 / 2e-72 AT5G54855 238 / 3e-82 Pollen Ole e 1 allergen and extensin family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0287 [flax] [poplar] Transthyretin PF01190 [flax] [poplar] Pollen_Ole_e_1 Pollen protein Ole e 1 like
Representative CDS sequence Show only first row Show all	>Lus10019622 pacid=23142537 polypeptide=Lus10019622 locus=Lus10019622.g ID=Lus10019622.BGIv1.0 annot-version=v1.0 ATGATGATGAGGATTGGAGTTATTTTGTTGATGGCCGCTATCCTTCTGGTGACTGGTGTTGAAGCTTGGACTGGTGAAATTCGCGGAAGAGTTGTTTGTG ATGTGTGCGGAGATTCCTCTATTGGCCCTGAGGATCACGTTCTGGAAGAGTTGTATCTTTGTGCACTGCCGTTTCTTCTGGAGCGGAGATGTTCATCGTT GCAACCTTGTGACACTGCAGGTGCTGAAGTAGCTGTTCTGTGCATAACAAAGTCAGGGGAAGTTGTTAACTATCAAGCATTTACAAATTCCAAAGGGATA TACACTGTCGCAGAAACTATGCCCCAGAACGACCGTTGGGATGCATGCCTGGCAACATCAATCAGCAGTTTCCATGAACACTGCAGCCATCTGGGACCTA GTAGCAAAGGAGTCAAGTTCAGTTACAAAAAGCCATCTGGGTATTCTCACAGCATCAAACCATTTGTGTACCGGCCTTCCAGCGCACCATCGTACTGCTT GTAG
AA sequence Show only first row Show all	>Lus10019622 pacid=23142537 polypeptide=Lus10019622 locus=Lus10019622.g ID=Lus10019622.BGIv1.0 annot-version=v1.0 MMMRIGVILLMAAILLVTGVEAWTGEIRGRVVCDVCGDSSIGPEDHVLEELYLCALPFLLERRCSSLQPCDTAGAEVAVLCITKSGEVVNYQAFTNSKGI YTVAETMPQNDRWDACLATSISSFHEHCSHLGPSSKGVKFSYKKPSGYSHSIKPFVYRPSSAPSYCL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G54855			Pollen Ole e 1 allergen and ex...		Lus10019622 [exp]	0	1
AT1G67350			unknown protein		Lus10015785 [exp]	1.7	0.8400
AT2G28310			Protein of unknown function (D...		Lus10000145 [exp]	2.8	0.7441
AT1G26550			FKBP-like peptidyl-prolyl cis-...		Lus10015714 [exp]	4.2	0.8169
AT3G59280		TXR1	THAXTOMIN A RESISTANT 1, Prote...		Lus10032532 [exp]	9.6	0.7874
AT1G13810			Restriction endonuclease, type...		Lus10017632 [exp]	12.0	0.7164
AT1G71180			6-phosphogluconate dehydrogena...		Lus10001349 [exp]	16.9	0.7715
AT3G53970			proteasome inhibitor-related (...		Lus10035223 [exp]	18.2	0.7006
AT5G67320		HOS15	high expression of osmotically...		Lus10024972 [exp]	21.5	0.7313
AT1G52343			unknown protein		Lus10035888 [exp]	21.8	0.6985
AT4G18930			RNA ligase/cyclic nucleotide p...		Lus10029278 [exp]	24.0	0.7725

Compare expression of checked genes

Lus10019622 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.