Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G23280 252 / 8e-84 MAK16 protein-related (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000846 [exp] 285 / 1e-97 AT1G23280 273 / 4e-92 MAK16 protein-related (.1) Lus10019649 [exp] 263 / 5e-88 AT1G23280 296 / 2e-100 MAK16 protein-related (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G085300 [exp] 280 / 7e-95 AT1G23280 298 / 7e-101 MAK16 protein-related (.1) Potri.015G083700 [exp] 280 / 7e-95 AT1G23280 296 / 3e-100 MAK16 protein-related (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04874 [flax] [poplar] Mak16 Mak16 protein C-terminal region
Representative CDS sequence Show only first row Show all	>Lus10019648 pacid=23139248 polypeptide=Lus10019648 locus=Lus10019648.g ID=Lus10019648.BGIv1.0 annot-version=v1.0 ATGCAGCACGACGAGGTTATATGGCAAGTCATCAGGCACAACCACTGCAGTTTCATGGCCAAAATCACGGCTGGAAACTTCTGTAGAAACCCGTACAATG TTACCGGACTTTGCAATCGGAGCTCTTGTCCTCTCGCCAACAGTCGTTACGCCACCATCCGTGACCATGATGAGAGAGCTCATAAACCTAATCAGTTATG GGAAAGATTGAAGTTGCCTCGGAACTACGAGAAGGCGCTTGAACTTGTCAACAAGCATATGATGTACTGGCCTCAGTTGCTTGTTCACAAAACGAAGCAG CGGCTGACTAAAATGACTCAGATGCGCATTCGTATGCGGAAGTTAGCTCTTAAGACGAGGGAGGTGGTGAAAACAATTCCTAGAAAAGAGATTAAGAGGG AAGCAAGAAGGGAGGAAAAGGCCGAAAAGGCTGCAGTTTTGGACAAGAGTATTGAAAAAGAATTGCTGGAACGGCTGACGACGGGAGTGTATGGGGATAT ATATAACTATCCAGTTGATAAGTATTTGGAGATTATTGACCGTGAGGACCTCCAGGTTGAGGTTGAAGAAGAGGAGGAAGCCGAGATCGAATATGTTGAA GGTAAATTTGAGGACGAACAGGAAGAGGACATAGAAGATTTTGGCAATATGACATTAGCTTCTCGGGAGGATCATGGTAAAGTCCTAATTCTATATGATG TGTTGTAA
AA sequence Show only first row Show all	>Lus10019648 pacid=23139248 polypeptide=Lus10019648 locus=Lus10019648.g ID=Lus10019648.BGIv1.0 annot-version=v1.0 MQHDEVIWQVIRHNHCSFMAKITAGNFCRNPYNVTGLCNRSSCPLANSRYATIRDHDERAHKPNQLWERLKLPRNYEKALELVNKHMMYWPQLLVHKTKQ RLTKMTQMRIRMRKLALKTREVVKTIPRKEIKREARREEKAEKAAVLDKSIEKELLERLTTGVYGDIYNYPVDKYLEIIDREDLQVEVEEEEEAEIEYVE GKFEDEQEEDIEDFGNMTLASREDHGKVLILYDVL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G23280			MAK16 protein-related (.1)		Lus10019648 [exp]	0	1
AT1G23280			MAK16 protein-related (.1)		Lus10000846 [exp]	5.5	0.8813
AT3G05390			unknown protein		Lus10004494 [exp]	12.5	0.8659
AT4G00660		ATRH8	RNAhelicase-like 8 (.1.2)		Lus10014783 [exp]	13.6	0.8509
					Lus10010342 [exp]	15.9	0.8214
AT5G49510		PFD3, PDF3	prefoldin 3 (.1.2)		Lus10011145 [exp]	16.5	0.8408
AT1G80750			Ribosomal protein L30/L7 famil...		Lus10040040 [exp]	19.3	0.8547
AT5G05320			FAD/NAD(P)-binding oxidoreduct...		Lus10025068 [exp]	24.4	0.8574
AT1G05030			Major facilitator superfamily ...		Lus10030010 [exp]	26.2	0.8487
AT5G55630		ATTPK1, ATKCO1	TWO PORE K CHANNEL 1, TWO PORE...		Lus10001912 [exp]	33.3	0.8317
AT1G07290		GONST2	golgi nucleotide sugar transpo...		Lus10005865 [exp]	38.2	0.8240

Compare expression of checked genes

Lus10019648 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.