Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G22125 3090 / 0 POM2, CSI1 POM-POM 2, cellulose synthase-interactive protein 1, binding (.1) AT1G77460 1649 / 0 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.1), Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.2) AT1G44120 1260 / 0 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.1) AT2G23140 68 / 9e-11 RING/U-box superfamily protein with ARM repeat domain (.1.2) AT5G58680 63 / 8e-10 ARM repeat superfamily protein (.1) AT3G46510 64 / 9e-10 ATPUB13 ARABIDOPSIS THALIANA PLANT U-BOX 13, plant U-box 13 (.1) AT3G54790 63 / 2e-09 ARM repeat superfamily protein (.1.2) AT2G28830 63 / 3e-09 AtPUB12 PLANT U-BOX 12 (.1) AT3G01400 60 / 1e-08 ARM repeat superfamily protein (.1) AT1G23030 59 / 2e-08 PUB11 ARM repeat superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042730 [exp] 1397 / 0 AT1G77460 2385 / 0.0 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.1), Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.2) Lus10029691 [exp] 157 / 3e-42 AT1G77460 265 / 6e-81 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.1), Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.2) Lus10029690 [exp] 128 / 2e-33 AT1G77460 183 / 1e-53 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.1), Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.2) Lus10019308 [exp] 65 / 1e-09 AT2G23140 911 / 0.0 RING/U-box superfamily protein with ARM repeat domain (.1.2) Lus10016565 [exp] 64 / 1e-09 AT3G46510 884 / 0.0 ARABIDOPSIS THALIANA PLANT U-BOX 13, plant U-box 13 (.1) Lus10011514 [exp] 64 / 1e-09 AT2G23140 916 / 0.0 RING/U-box superfamily protein with ARM repeat domain (.1.2) Lus10007738 [exp] 62 / 2e-09 AT3G01400 555 / 0.0 ARM repeat superfamily protein (.1) Lus10040834 [exp] 63 / 3e-09 AT3G46510 879 / 0.0 ARABIDOPSIS THALIANA PLANT U-BOX 13, plant U-box 13 (.1) Lus10024899 [exp] 62 / 6e-09 AT2G23140 551 / 0.0 RING/U-box superfamily protein with ARM repeat domain (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G087200 [exp] 3423 / 0 AT2G22125 3229 / 0.0 POM-POM 2, cellulose synthase-interactive protein 1, binding (.1) Potri.005G080100 [exp] 3412 / 0 AT2G22125 3215 / 0.0 POM-POM 2, cellulose synthase-interactive protein 1, binding (.1) Potri.005G180100 [exp] 1707 / 0 AT1G77460 2772 / 0.0 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.1), Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (.2) Potri.005G225400 [exp] 69 / 5e-11 AT3G54790 736 / 0.0 ARM repeat superfamily protein (.1.2) Potri.010G113900 [exp] 66 / 2e-10 AT1G23030 732 / 0.0 ARM repeat superfamily protein (.1) Potri.009G029600 [exp] 65 / 6e-10 AT3G46510 935 / 0.0 ARABIDOPSIS THALIANA PLANT U-BOX 13, plant U-box 13 (.1) Potri.002G037700 [exp] 65 / 6e-10 AT3G54790 707 / 0.0 ARM repeat superfamily protein (.1.2) Potri.001G238500 [exp] 64 / 1e-09 AT3G46510 912 / 0.0 ARABIDOPSIS THALIANA PLANT U-BOX 13, plant U-box 13 (.1) Potri.008G128600 [exp] 63 / 2e-09 AT1G23030 697 / 0.0 ARM repeat superfamily protein (.1) Potri.005G144700 [exp] 63 / 3e-09 AT2G23140 972 / 0.0 RING/U-box superfamily protein with ARM repeat domain (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0154 [flax] [poplar] C2 PF00168 [flax] [poplar] C2 C2 domain CL0020 [flax] [poplar] TPR PF00514 [flax] [poplar] Arm Armadillo/beta-catenin-like repeat
Representative CDS sequence Show only first row Show all	>Lus10019679 pacid=23139311 polypeptide=Lus10019679 locus=Lus10019679.g ID=Lus10019679.BGIv1.0 annot-version=v1.0 ATGTCTTCTATGGGAGCAGCTTGCGCCAATGTTTACGTGCAGCAAAAGCGGGTGCAGGAGAAGCTAAAGATGAAGATGGAAGCAGAAGAAAAAAGAAGAA ACCATAAGTCCTGCGGCTGCGGCGGCGGTTTCGATACGGAAAAACCTGCCGGAGGCGGCGATTCTAGGGTCCACCCCGTCAAAGCCGGCCCCGATCATCT TTCGGCGGCGGGAGAACATGGTAAAAATGGCGATTCTAAACTTCAAGATTCAGAGCCCCATTCAGTTATGAAGATGGGTCTAAGAGATCGTACCAGTAGT ATGGAGGATCCAGATGGAACATTAGCAAATGTGGCACAATGCATTGAGCAACTGCGACAGAGTTCCTTATCTGTACAAGACAGGGAATATTCTTTAAGGC AGTTGCTAGAACTTATTGAGACACGTGAAAATGCTTTTAGTGCTGTTGGTTCTCACTCTCAGGCAGTTCCTGTGCTTGTTTCGCTTCTCCGATCAGGATC GCTTGGAGTCAAGATCCAAGCTGCTACTGTCTTAGGCTCTCTATGCAAAGAAAATGAACTGAGGGTAAAAGTGCTGCTAGGGGGCTGCATCCCACCACTG CTTGGCCTCCTCAAATCCAGCTCCACAGAGGGTCAAATTGCAGCAGCAAAGACAGTGTTTGCTGTTTCTCAAGGCGGTGTAAAGGATCATGTGGGTTCAA AGATCTTTTCAACCGAAGGAGTTGTACCAGTGCTATGGAAGCTGCTTCAAAATGGGGTCAAAAGTGGTAACTTGGTCAATAGCCTTTTGACTGGTGCATT GAAGAATCTTGCTAGCAGCACTGAAGGTTTCTGGACCGCAACAATTCAAGCTGGTGGGGTGGATATACTTGTCAAGTTGCTTACAACAGGACAATCAGAC ACTCAAGCAAATGTGTGTTATCTTCTGGGTTGCATGATGATGGAGGATCCATCTATTTGTTCCAAGGTACTGGCTGCAGAGGCCACTAAACAACTGCTAA AGCTGATAGGTTCAGGTAATGAAGCACCTGTGAGAGCAGAAGCTGCAGGTGCACTCAAGTCTCTTTCTGCTCAGTGTAAAGAAGCAAGACGAGAAATAGC TAGTGCCAATGGGATTCCTGTCTTGATAAATGCAACAATAGCTCCCTCAAAAGAGTTCATGCAGGGCGAGCATGCCCAAGCACTGCAAGAGAATGCTATG TGCGCACTCGCAAATATTTCTGGCGGCTTGTCTTTTGTCATTTCCAGCCTTGGTCAAAGCCTTGAATCATGTTCTTCTCCTGCTCAAACTGCTGATACGT TAGGTGCTCTGGCATCAGCTTTAATGATATATGATAGCAAAGCTGAATTTACAAGGGCATCAGATGCTGAAGCTGTTGAGCAAACTTTGGTCAAGCAGTT CAAGCCTCGGTTACAATTTCTTGTTCAGGAGCGGACTATAGAGGCATTGGCCAGTTTGTATGGGAATTCTATCCTCTCTGCTAAACTTGAGAACTCTGAA GCAAAACGTTTGCTCGTTGGCTTGATCACAATGGCAACAAATGAAGTACAGGAAGAGCTTGTGAGAGCCCTTCTAGCACTTTGTGACAGTGAAGGTAGCC TGTGGCGTGCACTTCAAGGTCGTGAGGGGGTTCAGCTATTAATTTCTCTTCTTGGGCTTTCCTCAGAACAGCAACAAGAATGTGCAGTTGCATTGCTCTG CCTTTTATCTAATGAAAATGATGAAAGCAAGTGGGCCATCACTGCTGCGGGTGGTATACCCCCGCTTGTACAAATTCTGGAGACAGGATCTGCCAAAGCC AAGGAAGATTCTGCTACTATCCTCAGGAACCTATGCAATCACAGTGAGGATATACGTGAATGCGTTGAGAGCGCTGATGCTGTTCCAGCATTGTTATGGC TTCTGAAGAATGGAAGTTCAAATGGAAAAGAAATTGCAGCAAAGACATTGAATCATTTGATCCATAAATCTGATACAGCAACTATTAGTCAGCTCACTGC ATTATTAACCAGTGAGCTACCAGAATCCAAAGTGTATGTTCTTGATGCAATGAAAAATATGCTTTCTATGGTTCCATTGAGTGACATATTACGCGAGGGT AGTGCTGCTAATGATGCAATTGAGACTATGATAAAGATACTGAACTCAATGAAGGAAGAGACTCAGGCAAAGTCAGCCTCAGCGTTGGCTGGAATCTTTG AGATGCGGAAGGATTTGCGTGAAAGTAGCATTTCCGTTAGGACTCTTTGCTCAGTGATGAAATTGCTAAATGTTGAATCTGAAAGCATCTTGGCAGCGTC AGCTCATTGCCTTGCTGCAATATTTCTTTCCGTAAAGGAAAACAGAGATGTGGCAGCAGTCGCTCGGGATTTGTTATCTCCTTTGGTAACACTAGCCAAC TCTTCTGCTTTGGAAGTTGCTGAGCAGGCAGTATGTGCACTGGCAAATCTTATTTTGGATAGTGAAGCCTCCGAGAAAGCCATTTCTGAAGAAATTATTC TACCAGCAACGAGGGTTTTGCAAGAAGGCACGATTTCTGGAAAGACCCATGCAGCTGCTGCAATTGCCCGTCTATTGCATTCTCGCAAAATTGGTTATGC GGTAACTGATTGTGTCAATCGCACTGGGACTGTACTAGCATTGGTTTCCTTCCTTGAATCTGCTAATGGTGGATCTGCTGCTGTTTCAGAGGCTCTAGAA GCACTTGCTATTTTGTCAAGGTCAGATGAGGCAACTGGAGACATTAAACCTGCATGGGCAGTTTTAGCAGAATTTCCGGAAAGTGTAACACCAATAGTCT CATCCATTGCAGATGCAACACCGTTGTTGCAGGATAAAGCTATTGAAATATTGTCTCGACTTTGTAGAGATCAGTCAGTTGTTTTAGGAGATACAATTGC TACTTCCTCTGGATGTATAACCTCTATTGCTAGAAGAGTGATCAATTCCACCAGAGCGAAAGTCAAAATTGGGGGAGCTGCACTGCTTATTTGTGCTGCT AAAGTTAGCCATCAGAGGGTAGTGGAAGATCTTAATCAATCAAATTCGTGTATCTATCTGATCCAGTCACTTGTTGCTATGCTCACTCCAATAGCAAGCC AAAATGATGGCAACAAATGCATCAGCATCTGCAGACATTCTAAAATAGATGGTGGAAATGGAGAGTCTACGCCAGAAACATCCATCATCCATGGTGGAAG AGTGGAAGCTCTAACAGACATAATCTCAAATCGCTACTTGCAATATAATCAGAGTGAGCTTAACGAGGATAGCAGCATCTGGATATGTGCTTTACTACTG GCAATCTTGTTCCAAGATAGAGACGTAATAAGAGGAAATGCAACCATGAAATCTGTACCTGTACTCGCAAATCTGTTGAAGACAGAAGAGTTTTCAAATA GATATTTTGCTGCACAAGCAGTAGCGAGTATGGTCTGTAATGGAAGTAGGGGCACTCTTCTGTCTGTTGCTAATTCTGGTGCAGCCGGGGGGCTTATTTC CTTGCTGGGTTGTGCTGATAGTGATATATCCGACCTTCTGGAACTGTCGGAAGAGTTTGGTTTGGTGAATTACCCGGACCAAGTTGCTCTTGAGAGGTTG TTCAGAGTTGAAGACATAAGGGTTGGTGCTACTTCTAGGAAAGCCATACCTGCACTTGTTGATCTACTGAAGCCGATTCCTGATCGTCCTGGAGCACCTT TCCTGGCGCTGGGCCTCTTGACTCAGCTTGCAAAAGAGTGTCCATCAAATACGATTGTCATGGTTGAATCAGGGGCCTTGGAAGCACTGACAAAATATCT TTCGCTTGGACCACAAGATGCAACTGAAGAGGCTGCAACTGATCTTTTGGGGATTCTATTTAGCAGTCCCGAGATCAGGCGGCACGAGTCAGCTTTTGGC GCCGTTAGCCAACTTGTTGCTGTATTACGGTTGGGAGGAAGAGGAGCTAGGTACAGTGCTGCCAAAGCGCTGGAGAATCTTTTCTCTGCCGATCATATAA GGAATGCAGACACGGCTAGACAATCCGTCCAGCCCCTGGTGGAGATTCTAAATACCGGGCTGGAGAAAGAGCAGCATGCTGCAATTGCAGCGCTGGTTAG ATTATTAAGTGAAAATCCATCAAGAGCCCTTGCAGTTGCAGATGTTGAAATGAATGCTGTCGATGTCCTCTGTAGGATCCTTTCTTCGAATTGTTCAATG GAACTGAAGGGGAATGCTGCCGAGTTATGTGGAGTCCTTTTCGGCAATACTAAAATCAGGTCCACCATGGCTGCAGCACGTTGCGTTGAGCCTCTCGTCG CTCTCCTTGTCACGGAGTTTAGTCCAGCTCAGCATTCGGTTGTACGTGCACTTGATAAGCTTGTCGACGATGAGCAACTAGCGGAACTTGTAGCCGCCCA CGGCGCAGTTGTTCCTCTTGTCGGTCTTCTCTACGGCAAGAATTATATGCTCCATGAGGCTATCTCTAGAGCACTTGTAAAGCTGGGGAAAGATCGGCCG GCTTGTAAGTTGGCAATGGTGAAAGCTGGAGTAATTGAGAGTGTACTGGATATCCTCTATGAAGCACCAGATTACCTCTCTTCTGCATTTGCCGAACTCC TCAGGATACTGACAAATAACGCTAGCATAGCCAAAGGGGCATCCGCTGCTAAAGTGGTAGAGCCACTATTCCAGTTGTTGACTCGACCCGAATTTGGGGC AGATGGACTACACAGTGCATTGCAAGTTCTCGTAAATATCCTCGAGCATCCACGATGTCGAGCTGATTACACTCTCTCCTCTCACCAAGCTATCGAGCCA CTCATCCCCTTACTCGATGCTCCAGCTCCAGCAGTGCAACAGCTGGCAGCGGAGCTTCTCTCGCATTTATTACTCGAAGAGCATCTTCAGAAGGATCCGC TGACTCCGCAGGTAATTGGTCCCCTCCTGCGTGTTCTTGGTTCGGGAATACACATTCTCCAGCAGAGAGCCGTAAAGGCCCTTGTCGGTATTGCCCTGAC GTGGCCAAACGAAATAGCGAAAGAAGGCGGCGTCGCTGAGCTGTCGAAAGTAATCTTGCTAGCCGATCCTTCCCTTCCTCATGCTCTATGGGAATCCGTA GCTTCTGTCTTGGCCAGCATTCTCCAGTTCAGTTCCGAATTCTTCTTGGAAGTTCCTGTCGCTGTTCTCGTAAGGCTGCTCCGTTCGGGCAGCGAAGGCA CGGTAGTTGGTGCGTTAAATGCTCTTCTGGTGCTGGAAAGCGACGACGGTACTAGCGCCGAAGCAATGGCTGAAAGCGGAGCAATCGAGGCTTTGCTCGA ACTTTTGAGGTCTCATCAGTGCGAGGAGACGGCTGCCAGGCTTCTGGAAGTGTTGCTCAACAACGTGAAGATTCGAGAATCGAAAGCAGCGAAAACTGCG ATCCTGCCATTGTCGCAGTACTTGTTGGATCCACAGACGCAGGGGCAGCAGACGAGGCTGCTGTCGACTTTGGCCCTTGGCAACCTTTTCCAGAACGAAG GCCTCGCTCGAAGTAGCGATGCCGCGTCTGCTTGTCGTGCACTAGTCAACGTGCTTGAAGAGCAACCGACTGAAGAAATGAAAGTAGTGGCCATCTGTGC GCTTCAGAATCTCGTGATGTACAGCAGATCGAATAAGCGAGCTGTTGCGGAAGCCGGTGGCGTCCAGGTAGTTCTCGATCTCATCGGATCGAGTGATCCA GATACTTCCGTCCAAGCTGCGATGTTTGTGAAACTTCTCTTCTCCAATCATACCATTCAAGAGTATGCCTCCAGCGAGACAGTCAGAGCTATAACTGCTT CCATTGAAAAGGATCTGTGGGCAACTGGAACTGTTAACGAGGAATATCTGAAAGCTCTAAACGCTCTCTTCAACAACTTCCCTCGCTTAAGAGCCACAGA ACCCGCAACACTCAGCATACCGCATTTGGTCACATCTCTCAAAACAGGCTCAGAAGCAACTCAGGAGGCTGCTCTAGATGCACTCTTCCTTCTCCGACAA GCTTGGTCAGCGTGCCCAGCGGAAGTCTCGAGGGCTCAATCCATCGCCGCTGCGGACGCGATCCCCTTGTTACAGTACTTGATCCAGTCTGGGCCGCCCA GATTCCAGGAGAAGGCCGAGTTTCTGTTGCAGTGCTTGCCGGGTACTTTGGTGGTCATCATAAAGCGTGGAAACAACATGAAACAGTCAGTTGGGAACCC TAGCGTCTTCTGCAAGATTACTTTGGCCAACACGCCACCTAAACAGACCAAGGTCGTCTCGACTGGACCTAACCCAGAGTGGGACGAGAGCTTTGCATGG ACGTTCGAAAGCCCTCCGAAAGGACAGAAGCTTCACATCTCATGCAAGAACAAGAGCAAAATGGGCAAGAGCTCGTTCGGGAAAGTGACGATCCAGATCG ACCGGGTGGTGATGCTAGGAGCAGTGGCCGGAGAGTACACGTTGTTGCCGGAAAGCAAAAGCGGGCCTTCAAGAAACCTGGAGATAGAGTTCCAGTGGTC TAACAAGTAA
AA sequence Show only first row Show all	>Lus10019679 pacid=23139311 polypeptide=Lus10019679 locus=Lus10019679.g ID=Lus10019679.BGIv1.0 annot-version=v1.0 MSSMGAACANVYVQQKRVQEKLKMKMEAEEKRRNHKSCGCGGGFDTEKPAGGGDSRVHPVKAGPDHLSAAGEHGKNGDSKLQDSEPHSVMKMGLRDRTSS MEDPDGTLANVAQCIEQLRQSSLSVQDREYSLRQLLELIETRENAFSAVGSHSQAVPVLVSLLRSGSLGVKIQAATVLGSLCKENELRVKVLLGGCIPPL LGLLKSSSTEGQIAAAKTVFAVSQGGVKDHVGSKIFSTEGVVPVLWKLLQNGVKSGNLVNSLLTGALKNLASSTEGFWTATIQAGGVDILVKLLTTGQSD TQANVCYLLGCMMMEDPSICSKVLAAEATKQLLKLIGSGNEAPVRAEAAGALKSLSAQCKEARREIASANGIPVLINATIAPSKEFMQGEHAQALQENAM CALANISGGLSFVISSLGQSLESCSSPAQTADTLGALASALMIYDSKAEFTRASDAEAVEQTLVKQFKPRLQFLVQERTIEALASLYGNSILSAKLENSE AKRLLVGLITMATNEVQEELVRALLALCDSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKA KEDSATILRNLCNHSEDIRECVESADAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTATISQLTALLTSELPESKVYVLDAMKNMLSMVPLSDILREG SAANDAIETMIKILNSMKEETQAKSASALAGIFEMRKDLRESSISVRTLCSVMKLLNVESESILAASAHCLAAIFLSVKENRDVAAVARDLLSPLVTLAN SSALEVAEQAVCALANLILDSEASEKAISEEIILPATRVLQEGTISGKTHAAAAIARLLHSRKIGYAVTDCVNRTGTVLALVSFLESANGGSAAVSEALE ALAILSRSDEATGDIKPAWAVLAEFPESVTPIVSSIADATPLLQDKAIEILSRLCRDQSVVLGDTIATSSGCITSIARRVINSTRAKVKIGGAALLICAA KVSHQRVVEDLNQSNSCIYLIQSLVAMLTPIASQNDGNKCISICRHSKIDGGNGESTPETSIIHGGRVEALTDIISNRYLQYNQSELNEDSSIWICALLL AILFQDRDVIRGNATMKSVPVLANLLKTEEFSNRYFAAQAVASMVCNGSRGTLLSVANSGAAGGLISLLGCADSDISDLLELSEEFGLVNYPDQVALERL FRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLAKECPSNTIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSPEIRRHESAFG AVSQLVAVLRLGGRGARYSAAKALENLFSADHIRNADTARQSVQPLVEILNTGLEKEQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSM ELKGNAAELCGVLFGNTKIRSTMAAARCVEPLVALLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVVPLVGLLYGKNYMLHEAISRALVKLGKDRP ACKLAMVKAGVIESVLDILYEAPDYLSSAFAELLRILTNNASIAKGASAAKVVEPLFQLLTRPEFGADGLHSALQVLVNILEHPRCRADYTLSSHQAIEP LIPLLDAPAPAVQQLAAELLSHLLLEEHLQKDPLTPQVIGPLLRVLGSGIHILQQRAVKALVGIALTWPNEIAKEGGVAELSKVILLADPSLPHALWESV ASVLASILQFSSEFFLEVPVAVLVRLLRSGSEGTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRESKAAKTA ILPLSQYLLDPQTQGQQTRLLSTLALGNLFQNEGLARSSDAASACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDP DTSVQAAMFVKLLFSNHTIQEYASSETVRAITASIEKDLWATGTVNEEYLKALNALFNNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQ AWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVFCKITLANTPPKQTKVVSTGPNPEWDESFAW TFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLEIEFQWSNK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G22125		POM2, CSI1	POM-POM 2, cellulose synthase-...		Lus10019679 [exp]	0	1
AT1G52360			Coatomer, beta' subunit (.1.2)		Lus10037525 [exp]	1.4	0.9652
AT2G45540			WD-40 repeat family protein / ...		Lus10009305 [exp]	2.0	0.9627
AT1G30450		HAP5, ATCCC1, C...	HAPLESS 5, cation-chloride co-...		Lus10003407 [exp]	3.5	0.9446
AT2G21390			Coatomer, alpha subunit (.1)		Lus10037538 [exp]	4.2	0.9625
AT1G79570			Protein kinase superfamily pro...		Lus10031173 [exp]	4.6	0.9433
AT3G60920			unknown protein		Lus10009306 [exp]	6.6	0.9565
AT4G38200			SEC7-like guanine nucleotide e...		Lus10015863 [exp]	7.1	0.9520
AT5G64740		PRC1, IXR2, E11...	PROCUSTE 1, ISOXABEN RESISTANT...		Lus10003525 [exp]	7.7	0.9275
AT1G13980		VAN7, EMB30, GN	VASCULAR NETWORK 7, GNOM, EMBR...		Lus10036789 [exp]	8.0	0.9419
AT4G31480			Coatomer, beta subunit (.1.2)		Lus10015105 [exp]	9.5	0.9402

Compare expression of checked genes

Lus10019679 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.