Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13490 606 / 0 AAC2 ADP/ATP carrier 2 (.1.2) AT3G08580 596 / 0 AAC1 ADP/ATP carrier 1 (.1.2) AT4G28390 523 / 0 ATAAC3, AAC3 ADP/ATP carrier 3 (.1) AT5G17400 359 / 1e-123 ER-ANT1 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) AT5G56450 189 / 4e-57 PM-ANT Mitochondrial substrate carrier family protein (.1) AT2G37890 111 / 1e-27 Mitochondrial substrate carrier family protein (.1) AT4G26180 108 / 9e-27 Mitochondrial substrate carrier family protein (.1) AT3G55640 108 / 9e-27 Mitochondrial substrate carrier family protein (.1) AT4G01100 106 / 1e-25 ADNT1 adenine nucleotide transporter 1 (.1.2) AT1G14560 100 / 1e-23 Mitochondrial substrate carrier family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016418 [exp] 727 / 0 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10019702 [exp] 709 / 0 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016417 [exp] 707 / 0 AT5G13490 602 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031843 [exp] 556 / 0 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031276 [exp] 553 / 0 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10039847 [exp] 528 / 0 AT4G28390 545 / 0.0 ADP/ATP carrier 3 (.1) Lus10034658 [exp] 343 / 5e-117 AT5G17400 491 / 5e-177 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10017874 [exp] 332 / 3e-113 AT5G17400 473 / 5e-170 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10018612 [exp] 311 / 2e-106 AT5G13490 301 / 1e-102 ADP/ATP carrier 2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G062200 [exp] 632 / 0 AT5G13490 625 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G267800 [exp] 630 / 0 AT3G08580 592 / 0.0 ADP/ATP carrier 1 (.1.2) Potri.001G019400 [exp] 605 / 0 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.003G204600 [exp] 602 / 0 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.007G139100 [exp] 540 / 0 AT4G28390 572 / 0.0 ADP/ATP carrier 3 (.1) Potri.017G012800 [exp] 538 / 0 AT4G28390 575 / 0.0 ADP/ATP carrier 3 (.1) Potri.012G062500 [exp] 339 / 1e-115 AT5G17400 416 / 5e-147 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Potri.006G227100 [exp] 194 / 6e-59 AT5G56450 462 / 4e-165 Mitochondrial substrate carrier family protein (.1) Potri.006G153600 [exp] 108 / 2e-26 AT4G26180 475 / 4e-170 Mitochondrial substrate carrier family protein (.1) Potri.001G094100 [exp] 106 / 1e-25 AT4G01100 563 / 0.0 adenine nucleotide transporter 1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10019701 pacid=23139305 polypeptide=Lus10019701 locus=Lus10019701.g ID=Lus10019701.BGIv1.0 annot-version=v1.0 ATGGTTGATCAGGTTCAACACCCCACTGTTATGCAGAAGGTTGCTGGTCAGTACCTCTCCCAGGATGTTCAGAGGTACACTGGTTCCTTCCAGAGGCCTG CTGTGTCCCAAAGGCGTGCATATGGAAACTACTCCAATGCTGCATTCCAGTACTGTGGTGCTTCAACTGCTGTTGCATCTCCTGTTTTCGTCCAGGCTCC ATCTGAGAAAGGATTGGCAGGGTTTGCCATTGATTTTCTTATGGGAGGAGTTTCTGCAGCCGTCTCCAAAACTGCTGCTGCTCCCATTGAGCGTGTGAAG CTTTTGATCCAGAACCAGGATGAGATGATCAAGACTGGAAGACTTGCTCAACCTTACAAAGGTATTGGTGAGTGCTTCAAGAGAACCATCGCAGAAGAAG GTTTTGGTTCATTGTGGAGGGGTAACACTGCCAATGTCATCCGTTATTTCCCCACTCAGGTTAGCAAAGTTGTTACTCAGGCCTTGAACTTTGCCTTCAA GGATTACTTCAAAAGACTATTTAACTTCAAGAAGGACAAGGATGGTTACTGGAAGTGGTTTGCTGGAAACTTGGGATCCGGTGGTGCTGCTGGTGCATCT TCGCTTCTCTTTGTGTACTCTCTGGATTATGCCAGAACCCGGTTGGCGAATGATGCCAAGGCTGCAAAGAAGGGTGGTGAGAGGCAATTCAACGGTCTGG TTGATGTCTACAAGAAGACTTTGGCCTCAGATGGTATTGCTGGACTCTACCGTGGTTTCAACATTTCTTGTGTCGGAATCATCGTGTACCGTGGTCTCTA CTTCGGAATGTACGACTCTCTTAAGCCTGTTCTCTTGACCGGAAACCTGCAGGATAGTTTCTTCGCTAGCTTTGCCCTTGGATGGGTGATCACCAACGGT GCTGGACTTGCATCGTACCCAATTGACACCGTCCGCAGAAGAATGATGATGACCTCCGGTGAAGCCGTGAAGTACAAGAGCTCCCTTGATGCATTCAAGC AGATTGTGAAGAACGAGGGAACCAAGTCGCTCTTCAAGGGTGCTGGAGCCAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTCCTTTCCGGTTACGACAA GCTGCAGTTACTCGTTTTCGGCAAGAAGTACGGATCAGGCAGCGGTTAA
AA sequence Show only first row Show all	>Lus10019701 pacid=23139305 polypeptide=Lus10019701 locus=Lus10019701.g ID=Lus10019701.BGIv1.0 annot-version=v1.0 MVDQVQHPTVMQKVAGQYLSQDVQRYTGSFQRPAVSQRRAYGNYSNAAFQYCGASTAVASPVFVQAPSEKGLAGFAIDFLMGGVSAAVSKTAAAPIERVK LLIQNQDEMIKTGRLAQPYKGIGECFKRTIAEEGFGSLWRGNTANVIRYFPTQVSKVVTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLGSGGAAGAS SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFFASFALGWVITNG AGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLSGYDKLQLLVFGKKYGSGSG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13490		AAC2	ADP/ATP carrier 2 (.1.2)		Lus10019701 [exp]	0	1
AT5G13490		AAC2	ADP/ATP carrier 2 (.1.2)		Lus10016417 [exp]	1.4	0.8822
AT1G77130		PGSIP2, GUX3	glucuronic acid substitution o...		Lus10028623 [exp]	4.5	0.8915
AT1G34350			unknown protein		Lus10017068 [exp]	6.7	0.8816
AT2G46170			Reticulon family protein (.1.2...		Lus10036405 [exp]	13.9	0.8709
AT4G23620			Ribosomal protein L25/Gln-tRNA...		Lus10000590 [exp]	17.5	0.8788
AT3G44590			60S acidic ribosomal protein f...		Lus10020575 [exp]	21.9	0.8807
AT5G40660			ATP12 protein-related (.1)		Lus10009910 [exp]	26.5	0.8679
AT1G24510			TCP-1/cpn60 chaperonin family ...		Lus10006240 [exp]	33.9	0.8634
AT2G20420			ATP citrate lyase (ACL) family...		Lus10003620 [exp]	34.9	0.8773
AT1G29150		RPN6, ATS9	REGULATORY PARTICLE NON-ATPASE...		Lus10036805 [exp]	36.6	0.8629

Compare expression of checked genes

Lus10019701 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.