Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G15850 304 / 2e-102 JB67, FADB, ADS3, FAD5 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) AT3G15870 284 / 6e-95 Fatty acid desaturase family protein (.1) AT1G06100 278 / 2e-93 Fatty acid desaturase family protein (.1) AT2G31360 270 / 4e-90 ADS2 16:0delta9 desaturase 2 (.1) AT1G06080 269 / 9e-90 ADS1 delta 9 desaturase 1 (.1) AT1G06090 264 / 6e-88 Fatty acid desaturase family protein (.1) AT1G06120 261 / 1e-86 Fatty acid desaturase family protein (.1) AT1G06350 253 / 2e-83 Fatty acid desaturase family protein (.1) AT1G06360 249 / 4e-82 Fatty acid desaturase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001279 [exp] 330 / 3e-113 AT3G15850 387 / 2e-134 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10009469 [exp] 329 / 6e-113 AT3G15850 391 / 4e-136 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10009470 [exp] 323 / 2e-111 AT3G15850 358 / 7e-124 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10041043 [exp] 321 / 9e-110 AT3G15850 372 / 1e-128 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10041042 [exp] 320 / 4e-109 AT3G15850 374 / 3e-129 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10006180 [exp] 318 / 1e-108 AT3G15850 370 / 5e-128 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10017773 [exp] 306 / 7e-104 AT3G15850 380 / 4e-132 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10011488 [exp] 296 / 4e-99 AT3G15850 461 / 5e-163 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10023128 [exp] 289 / 2e-96 AT3G15850 458 / 1e-161 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G151700 [exp] 298 / 6e-100 AT3G15850 423 / 7e-148 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Potri.011G152100 [exp] 297 / 1e-99 AT3G15850 427 / 2e-149 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Potri.011G151800 [exp] 297 / 1e-99 AT3G15850 425 / 1e-148 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00487 [flax] [poplar] FA_desaturase Fatty acid desaturase
Representative CDS sequence Show only first row Show all	>Lus10019726 pacid=23139181 polypeptide=Lus10019726 locus=Lus10019726.g ID=Lus10019726.BGIv1.0 annot-version=v1.0 ATGACGACCACTGTGAAAAGCAGTGATAGGAGGAGGAAGCATTGGAACAAATGGGAAATAGTTATGGGTGTGAGCTTGGGAGTGGCACACCTGATGGCCT TTTGTGCTCTGTTTTATTGGTTCAGCTGGACAACCTTTTTGGTCTGGTTTTTGGTGACTAATGTTACGGGCGTTCTTGGTCTCAACTTCTCATACCACAG GCAGCTCACCCACCAGAGTTTCAAGACCCCCAAGTGGCTCGAATACTCTCTTGCTTACTGCGGTGCCCTTGCCCTTCAGGGTGATCCATTGACTTGGGTT AGCAACCACAGAGCTCATCACCAACACACTGACACAGAGGGAGATCTACACAGTCCAACCATGGGGTTTTGGTATAGCCATATGAATTGGATTTTCGACA CGTCCGTACAACTGCCTGAAGATCAACGAGAAAACGCAGTTGATCTGGAACAGCAAGCCTTCTACAGGTGGATGCGCAAAACATACATCTTACATCCATT GCTCCTTGCTCTTCTCCTCTACAAGTTTGGTGGAATGCCCTACTTATTATGGGGAATGGGGTTTAGAGTGGTATATCTCAGCCACGGGACATGGCTAGTA AACTCAGCTGGCCATACATGGGGAACTCAAGCTTGGAATACCAACGACTTGTCAAAAAACAACTGGTGGGTTGCAATGGTGTCCAACGGAGAGGGCTGGC ACAACAATCACCACGCATTCAGTAACTCGGCGAGACATGGACTCGAATGGTGGCAGATCGACACTACGTGGTACGCTGTGAAGTTGTTTGAAGCTGTGGG TTTGGTTTACGATGTCGAGCTCCCGACTCACAAGGACATGGAAAAGATAAAGATGGCGGCATCCCTTCACAAGGATTAA
AA sequence Show only first row Show all	>Lus10019726 pacid=23139181 polypeptide=Lus10019726 locus=Lus10019726.g ID=Lus10019726.BGIv1.0 annot-version=v1.0 MTTTVKSSDRRRKHWNKWEIVMGVSLGVAHLMAFCALFYWFSWTTFLVWFLVTNVTGVLGLNFSYHRQLTHQSFKTPKWLEYSLAYCGALALQGDPLTWV SNHRAHHQHTDTEGDLHSPTMGFWYSHMNWIFDTSVQLPEDQRENAVDLEQQAFYRWMRKTYILHPLLLALLLYKFGGMPYLLWGMGFRVVYLSHGTWLV NSAGHTWGTQAWNTNDLSKNNWWVAMVSNGEGWHNNHHAFSNSARHGLEWWQIDTTWYAVKLFEAVGLVYDVELPTHKDMEKIKMAASLHKD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G15850		JB67, FADB, ADS...	FATTY ACID DESATURASE B, fatty...		Lus10019726 [exp]	0	1
AT2G01870			unknown protein		Lus10009946 [exp]	6.5	0.8887
AT3G16250		PnsB3, NDF4	Photosynthetic NDH subcomplex...		Lus10025809 [exp]	20.6	0.8540
AT1G49975			unknown protein		Lus10006137 [exp]	21.1	0.8482
AT5G15802			unknown protein		Lus10022232 [exp]	22.1	0.8433
AT5G50400		ATPAP27, PAP27	ARABIDOPSIS THALIANA PURPLE AC...		Lus10019771 [exp]	25.1	0.8397
AT1G14790		ATRDRP1, RDR1	RNA-dependent RNA polymerase 1...		Lus10034391 [exp]	26.5	0.8090
AT3G52070			unknown protein		Lus10039603 [exp]	26.7	0.8260
AT3G18440		ATALMT9	aluminum-activated malate tran...		Lus10034301 [exp]	27.9	0.8189
AT1G13570			F-box/RNI-like superfamily pro...		Lus10004851 [exp]	28.6	0.7713
AT3G28050			nodulin MtN21 /EamA-like trans...		Lus10039429 [exp]	28.6	0.8338

Compare expression of checked genes

Lus10019726 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.