Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36780 135 / 8e-37 UDP-Glycosyltransferase superfamily protein (.1) AT4G34135 126 / 1e-34 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT2G15490 124 / 6e-33 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT4G34131 124 / 7e-33 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT2G36770 124 / 9e-33 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 122 / 7e-32 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36750 120 / 2e-31 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G15480 118 / 1e-30 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT4G34138 118 / 2e-30 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT2G36760 116 / 5e-30 UGT73C2 UDP-glucosyl transferase 73C2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014086 [exp] 309 / 9e-104 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019832 [exp] 241 / 3e-77 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014083 [exp] 239 / 2e-76 AT4G34131 489 / 2e-170 UDP-glucosyl transferase 73B3 (.1) Lus10019831 [exp] 167 / 7e-49 AT2G15490 425 / 8e-146 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014084 [exp] 160 / 2e-46 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019833 [exp] 140 / 5e-39 AT2G15480 483 / 2e-168 UDP-glucosyl transferase 73B5 (.1.2) Lus10014082 [exp] 138 / 5e-38 AT2G15480 483 / 3e-168 UDP-glucosyl transferase 73B5 (.1.2) Lus10014079 [exp] 128 / 3e-34 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10014080 [exp] 114 / 4e-30 AT2G15480 330 / 3e-110 UDP-glucosyl transferase 73B5 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G302400 [exp] 172 / 1e-50 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098400 [exp] 167 / 1e-48 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 159 / 1e-45 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 156 / 7e-45 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 155 / 2e-44 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303000 [exp] 153 / 1e-43 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303700 [exp] 150 / 9e-43 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 149 / 4e-42 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G099032 [exp] 142 / 1e-39 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.002G123700 [exp] 135 / 8e-37 AT4G34131 446 / 3e-153 UDP-glucosyl transferase 73B3 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10019829 pacid=23163947 polypeptide=Lus10019829 locus=Lus10019829.g ID=Lus10019829.BGIv1.0 annot-version=v1.0 ATGCATTGTTTCACACGTCAAGAGCCTTGGAAGGGTGTTGAATCTGATTCCGAGGCATTTGTGATGCCTGGTTTACCCCACCGGATTGAGTTCCCCAAGT TGCAACTTCCTCCTTTCTGGAAAGGTGAGGGGATTACTGAAGAATGGCTAGAAATGAGAGATCTGATAAACGAATCGGAGGAGAAGAGCTTCGGAGCTGT GGTGAATAGCTTCCACGAGCTCCAGCCTGGGTACTCCGAGCATTACAGGGAGGTTATAGAGAGAAAGGCATGGTTCATTGGTCCACTGTCGCTCGGTAAC AAAGACAGTACCTTGGAGAAAGCAGAAAGAATGAAAACGGCAGCAATTGATGGACACGAATGTTTAAGATGGCTAGACTGTAGAGAAGAACCCAATTCGG TTCTCTACATTTGTTTCGGGAGCATGTCTGATATTCCGGATGCTCAGCTTTTCGAGATTGCATCAGCTCTCGAGGCATCAGGGTTGGTGACGGATGTTCT GAGGTTTGGGGTTGGGATTGGGTCTCGGGAATGGTCGAGGAACGATAGGGAGATCATGGTTGGTGAACATGCTGAAGAAATGAGAGAGCGAGCTATGGAG CTTAAGGTAAAGGCTATGAAGGCTAATGAAGAAGGGGGATCGTCTTACTCTGATTTGAAATCATTGTTGGAGGAGCTTGTATCTGTAAGAGACAAGAAGG ATGTTGATTTGTCAAGCTGCAAACTGTAA
AA sequence Show only first row Show all	>Lus10019829 pacid=23163947 polypeptide=Lus10019829 locus=Lus10019829.g ID=Lus10019829.BGIv1.0 annot-version=v1.0 MHCFTRQEPWKGVESDSEAFVMPGLPHRIEFPKLQLPPFWKGEGITEEWLEMRDLINESEEKSFGAVVNSFHELQPGYSEHYREVIERKAWFIGPLSLGN KDSTLEKAERMKTAAIDGHECLRWLDCREEPNSVLYICFGSMSDIPDAQLFEIASALEASGLVTDVLRFGVGIGSREWSRNDREIMVGEHAEEMRERAME LKVKAMKANEEGGSSYSDLKSLLEELVSVRDKKDVDLSSCKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15490		UGT73B4	UDP-glycosyltransferase 73B4 (...		Lus10019829 [exp]	0	1
AT1G66930			Protein kinase superfamily pro...		Lus10022367 [exp]	3.2	0.8548
AT2G31140			Peptidase S24/S26A/S26B/S26C f...		Lus10022921 [exp]	3.6	0.8601
AT1G15360	AP2_ERF	WIN1, SHN1	WAX INDUCER 1, SHINE 1, Integr...		Lus10009480 [exp]	13.0	0.8538
AT3G62390		TBL6	TRICHOME BIREFRINGENCE-LIKE 6 ...		Lus10017671 [exp]	16.9	0.7613
AT3G23100		XRCC4	homolog of human DNA ligase iv...		Lus10022210 [exp]	19.0	0.8212
AT5G56670			Ribosomal protein S30 family p...		Lus10028808 [exp]	19.2	0.7996
AT3G25940			TFIIB zinc-binding protein (.1...		Lus10015458 [exp]	19.7	0.8517
AT1G76860			Small nuclear ribonucleoprotei...		Lus10026326 [exp]	21.0	0.8186
AT5G62140			unknown protein		Lus10038887 [exp]	22.2	0.8171
AT3G15150		HPY2, ATMMS21	HIGH PLOIDY2, A. THALIANA METH...		Lus10015968 [exp]	26.7	0.8307

Compare expression of checked genes

Lus10019829 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.