Lus10019839 [FLAX]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10019839 pacid=23164072 polypeptide=Lus10019839 locus=Lus10019839.g ID=Lus10019839.BGIv1.0 annot-version=v1.0
ATGGTGTTTTTCCAATCTTTGGTTTTTAGTTGTGATATTGGTTTTAATTGCTGTTTTTACCCGAACAATGTGATTTGTAGAACTGAAGGCCTTTGGTCTT
TCGGTGTGGCGGCGAGGTACGATGATGATGATGACGAGGAAGGGGACGTCTGCAGGATCTGTAGGAACCCTGGCGACGCGGAGAATCCGCTTAGGTATCC
TTGTGCTTGTAGTGGGAGTATTAAGTTTGTTCATCAGGATTGCCTCCTGCAGTGGCTGAATCACAGCAACGCCCGTCAGTGCGAGGTCTGCAAACATCCA
TTCTCCTTCTCTCCTGTCTATGCTGAAAATGCTCCATCGAGGCTTCCTTTTCAAGAATTTCTAGTTGGAATGGGGATGAAGGCATGCCATGTGATGCAAT
TCTTTTTGCGCCTTAGTTTTGTGCTCTCTGTGTGGCTCCTAATTATACCTTTCATAACATTTTGGATATGGCGTCTGGCCTTCTTGAGAAGTTTTGGTGA
TGCCCAGAGGTTGTTCTTGAGTCATGTCTCGACTACGGTTATTCTCACTGATTGTCTGCACGGGTTCCTGCTCTCTGCCAGCATTGTGTTCATTTTTCTT
GGAGCAACCTCTCTGAGAGATTACTTTCGTCATTTAAGAGAAATTGGTGGACAGGAAGTTGAGAGAGAAGAAGATGAAGGGGATAGAAACGGTGCCCGTG
TACCAAGGCGGCCTCTGGTACAGGAAAATAGAAATTTTGCTGGTGAGCCAAATGTTGAGGATGTTGGGGATGGAGGGGCACAAGGAATTGCTGGTGCTGG
TCAACTAATCAGAAGAAATGCAGAAAATGTTGCTGCTCAGTGGGAGATGCGAGCGGCTCGACTTGAAGCTCATGTTGAACAGATGTTTGATGGCTTAGAA
GACGCTGATGGTGCTGAGGACGTGCCTTTTGATGAACTTGTTGGGATGCAGGGTCCTGTTTTCCATTTGGTTGAAAATGCATTTACGGTTCTTGCAAGCA
ACATGATATTCCTTGGAGTTGTGATCTTTGTGCCCTTTTCGTTGGGACGGATTATACTCTACTACATATCTTGGCTATTCTCTTCTGCTAGGGGTCCTGT
ACTGTCAACTGTTGCAACGCTGAATGAATCTGGCCTCGCCCTTGCAAATATCACCCTGAAGAATGCATTAACAGCTGTGGCTAATCTGACCTCTGAGCCC
CATGATGGTGGCCATTTGAGCCATGTAGCTGAGACTGTTGGAATAAATGCTAGTGGATTACATGAGGCCTCAAGCAATGTAAGTACTTCACTCGCGAGTG
ATCTCTTAGAAGGGGCTACTATCGGTACTTCTCGGCTTTCAGATGTTACAACCCTTGCTATTGGCTATATGCTAATAGGCTTCCTAGTTTTCCTTTATCT
TGGTGTTGTTGCTTTGATTCGGTACACGAAGGGGGAGCCGTTGACCATGGGAAGGTTCTATGGTATTGCTTCATTAGCAGAGACAATTCCCTCACTCTTC
AGGCAATCCTTGGCAGCAATGAGGCATCTCATGACTATGATTAAAGTTGCCTTCCTTCTAGTAATTGAACTTGGGGTCTTTCCTCTGATGTGTGGCTGGT
GGCTTGACGTATGTACCATAAGGATGTTCGGAAAGTCTATGTCTCAACGAATTCAATTCTTCTCAGCTTCCCCACTGGCTAGCTCTTTGATTCACTGGGT
GGTGGGAATCGTCTACATGCTACAGATAAGCATCTTTGTCAGCCTTCTCCGAGGGGTTTTGCGTCGTGGAGTTCTTTATTTTCTGCGAGATCCTGCTGAT
CCAAACTACAATCCCTTCCGTGATTTAATTGATGATCCTGTGCACAAGCATGCTCGAAGGGTTCTGTTGTCTGTTGTTGTGTATGGGAGCTTGATTGTTT
TGCTGGTATTTTTACCTGTCAAACTTACAATGCGAATGGCCCCATCCATCTTTCCACTAGACATATCGGTGTCTGATCCATTCACGGAAATTCCAGCTGA
CATGCTTCTATTTCAAATTTGCATCCCATTTGCTGTTGAGCATTTTAAGCTGCGGACCACAATCAAGTCTCTCCTTCGTTATTGGTTTACAGCTATTGGG
TGGGCGCTTGGTTTGTCCTACTATTTATTGCCTAGACCTGGTGATGATAATGGTGGCCAAGAAAATGGCAATGTAGAACCTGGAAGGCAGGATCAGTTAC
AGGCTGTGCAGTTGGGGGGCCATGATCGTGCTCTGGCAGTAGCAGCTGTCGATGATCCCAACAGAGGAATTCCTGCAGCTGGGAATTTAAATGATGTGGA
GGAAGATGTGAATGATGATCAATCTGATTCTGGTTCATATTTCAGCAGGTCGAGTTTTATTTTCCGGATCGTGCTCTTGTTGGTGATAGCGTGGATGACC
CTTCTGGTCTTCAACTCTGCTTTGATCATTATACCCGTGTCACTTGGTCGTTCCCTTTTCAATGCCATTCCTCTTCTCCCGATAACACACGGCATCAAAT
GCAATGATCTATACGCTTTTATTATCGGAAGCTACGCCATTTGGACCACTCTGGCTGGAGCTAGATATTGTTTGGAGCATGTGAGAACAAAGAGAGCAGC
AGTGTTGTTTAATCAGATCCGGAAGTGGTGTGGCATCGTTCTCAAGAGCACTGCGCTACTTTCAATATGGGTTTTTGTCATTCCGGTGATGATTGGTCTG
TTGTTTGAGCTTCTGGTGATTGTTCCGATGCGGGTGCCTGTCGATGAAAGTCCAGTCTTTCTCTTGTATCAAGACTGGGCATTGGGACTGATCTTCCTTA
AGATCTGGACTAGACTGGTCATGCTCGATCACATGATGCCACTCGTCGATGAAACCTGGCGCATAAAATTCGAGCGGGTGCGGGAAGATGGCTTCTCGCG
GCTGCAAGGTCTTTGGGTGCTGCGTGAGATCGTGTTCCCAATAGTGATGAAGCTACTAACAGCCCTATGCGTGCCCTACGTCCTGGCAAGAGGAGTATTC
CCCGTATTCGGCTACCCATTAGTTGTTAACTCCGCAGTCTACAGGTTCGCCTGGCTGGGTTGCCTCTCCCTCAGCGTATTCTGCTTCTGCGCCAAGAGGT
TCCACGTCTGGTTCACCAACCTCCACAACTCGATCCGGGACGATCGGTACCTCATCGGCCGCAGGCTCCATAACTTCGGAGAGCACACCGAGGCGGCAAA
GCAGGAGGACGAGGCCGGGCCTTCAGAGGAAGCAGAGAGCTCAGGTAATGCCATGTTCGGTAATGAGAGAGAAGCTGAAGTAGGGTTGAGATTGAGAAAA
CAACCTTATCTCCCCCATTCTTTACCATGCCTTGGTGTCTGCGAAAATATTGAAGGACTTCAAGTTCTTGATACTGCATTGGCTTTGAGAGCTGATATTG
TTATGGACAACGATCCATGGCTATGGAAGAGGAGTTTTGCACAGAGAACAGTTAATGTTGCAGCAAAAAGCTATGGCAGTCCTGGGACAAGAGTTACTTG
TGAAGAGGCGAAGAAGATTCCTGCCAAGACTGTAGCTTTACCTTCCAAAATTGTGAAGAACCTGAATGAGAAGCTAGCTTCAGTGATTCTTGATGATCAG
CTGGCCAAACATGATCACTTTCTTGTACAACATGAGGATGAATTCTCTGCAGGCTTGGAGAAGGAAGAAGAAGAAGAGATTTTCTTGAAAAAGGAACTTA
CTGAGGAGGATCTAAGGCAGGGAGTACCAGCAAGGAAATCTCATCCGGATGCTTCAACGAAGCATTTCATGTGGCAGTTGAGCACCATCCCTGAAGAACA
AGAGCTGAAGATGGAACATGAAGCTACCACTGGTGGTACACATCCATCTCCCGAGCACGAAGATTTAGAGAAGAATAAGTTGACCGACACGAGCAAAAGG
CTCGCGAATTTAGTGATCGAGAACACGAAATTGAGCAGGAGTTTAATGTTGAAAGAGGAATTGGTTGACCAACTGCATAAGCAAGCATCTCAGAGATCGG
CAGAGTTCAACGCACTCATGTCGAGATTGGACACCACGGAGAAAGAAAACGCATTTCTAAAGTACGAGTTCCACATGCTCGAGAAAGAGATCGAGGTACG
TAGCGAGGAACTAACGTACAGTCGCCAATCTGCCGATGCGACCAGAATGCAGCACCTGGAATGCGTGAAGACGGTTGCCAAGCTGGAAGCGGAATGCCAG
ATGCTTCGTAGCAGCTCGACAAGTAAGGGGCAGAACCGGAATTTCCTGTTGGAAGAGAACAGGAGTCTCAAGGAGACACTGAGGAAGAAGAATGCAGAAC
TTCATTCTTCTCGCGGAATGTTCTCAAGAGCAGCCTCGAGGCTGTCACAGGCGGAAGCTCAACTGGCAGAACTTTCGAGGAAGGGTGCGAAGGCTATGGA
GCCAGTGAAGCACAGTTCTGACATTTGCAGCGACGATGAAGTTAGCTCTTCCTCGGGGTCATGGGCTAATGCTCTACTTTCAGAACTGGAACATTTTAGA
TATGGTAAAGTCAATACTCAACGTCAAGACTGCAAAGCAATCGGAAGCTTGGACATGAGTCTGATGGATGACTTTGTCGAGATGGAGAAATTCGCCATCG
TTTCAGTTGGCGACGATGCCTCCTCGAAGAATGTTACTAGTGGTGATGATGATGGTGATAAAGATCAAGACTTTGACTGGCTTCAGGTTGTTTTGAAGGC
ACTGATGAAGCAACAGCGGGTTTCAAATCGTAGCCTGCCTGAACTTCTCGAGGATATCAAGATCGCTATTGGCCAGGAATGTGTTCAATTATCTAACATG
GTCAAAGAAAATAAGATACTGAAAGATGAGCTACAGTCGGAAACTGAGAAGGCCGAGGCTTTGGCGAAAGAAGCTCGAGACTTGAGAACAGAATTAGAAA
CTGTAAGAGATGAGAAGTCAATGGTTGAGGAGCAGATGGAGAACCAGAAGTCAATGAATGAGGATCTTGACACTCAGCTTACTGTGGCTAAATCCAAGCT
GAATGAGATCATGCAGAAGTATTCATGCCTCGAGGTCGAATTGGAGGATAAGACCGACTGTTGCGAAGAGCTGGAATCGACATGTCTCGACCTTCAACTC
CAACTCGAAAGTGTGGGAAGCAATGAAACTATGAACAATACCATCACCGAAGAGGAAAAACAATCATCCCAAAATGGATGGGAGATCACGGCAGCCTCTG
CGAAGCTAGCCGAATGCCAAGAAACCATCTTGAACCTCGGGAAACAGCTAAAGGCATTGGCTTCACCGCGGGAAGCTGCACTTTTCGACAAGGTTTTCAA
TGCCACCAATGGCACAGCCATTGTCACCACCACCACCAATAACAACAACAGGAACATCTACAGGCGCTTCTCGTTACACGATCAGATGGTCGCTGAAGAC
AAAGCTAAAGCAATCATACTATACTCTCCCAAGGAAGATTCGGTGCGAAAATACGCAGACAGGCCAGATGAAGCGAAGGGAGCTGCAGAATGTGATAATA
AAACGGCTGATATGACTCTAGTCATTGTACCTACTAAACGACAGGCCGGAATCGGGTTTTGGAAGAAGCTACTAATGAGGAGGAAGAAAGGAGGAAGCAA
GAAGTCTCAGTCTTTGGTAAAAGTATAA
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10019839 pacid=23164072 polypeptide=Lus10019839 locus=Lus10019839.g ID=Lus10019839.BGIv1.0 annot-version=v1.0
MVFFQSLVFSCDIGFNCCFYPNNVICRTEGLWSFGVAARYDDDDDEEGDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHP
FSFSPVYAENAPSRLPFQEFLVGMGMKACHVMQFFLRLSFVLSVWLLIIPFITFWIWRLAFLRSFGDAQRLFLSHVSTTVILTDCLHGFLLSASIVFIFL
GATSLRDYFRHLREIGGQEVEREEDEGDRNGARVPRRPLVQENRNFAGEPNVEDVGDGGAQGIAGAGQLIRRNAENVAAQWEMRAARLEAHVEQMFDGLE
DADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRIILYYISWLFSSARGPVLSTVATLNESGLALANITLKNALTAVANLTSEP
HDGGHLSHVAETVGINASGLHEASSNVSTSLASDLLEGATIGTSRLSDVTTLAIGYMLIGFLVFLYLGVVALIRYTKGEPLTMGRFYGIASLAETIPSLF
RQSLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSMSQRIQFFSASPLASSLIHWVVGIVYMLQISIFVSLLRGVLRRGVLYFLRDPAD
PNYNPFRDLIDDPVHKHARRVLLSVVVYGSLIVLLVFLPVKLTMRMAPSIFPLDISVSDPFTEIPADMLLFQICIPFAVEHFKLRTTIKSLLRYWFTAIG
WALGLSYYLLPRPGDDNGGQENGNVEPGRQDQLQAVQLGGHDRALAVAAVDDPNRGIPAAGNLNDVEEDVNDDQSDSGSYFSRSSFIFRIVLLLVIAWMT
LLVFNSALIIIPVSLGRSLFNAIPLLPITHGIKCNDLYAFIIGSYAIWTTLAGARYCLEHVRTKRAAVLFNQIRKWCGIVLKSTALLSIWVFVIPVMIGL
LFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDETWRIKFERVREDGFSRLQGLWVLREIVFPIVMKLLTALCVPYVLARGVF
PVFGYPLVVNSAVYRFAWLGCLSLSVFCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHTEAAKQEDEAGPSEEAESSGNAMFGNEREAEVGLRLRK
QPYLPHSLPCLGVCENIEGLQVLDTALALRADIVMDNDPWLWKRSFAQRTVNVAAKSYGSPGTRVTCEEAKKIPAKTVALPSKIVKNLNEKLASVILDDQ
LAKHDHFLVQHEDEFSAGLEKEEEEEIFLKKELTEEDLRQGVPARKSHPDASTKHFMWQLSTIPEEQELKMEHEATTGGTHPSPEHEDLEKNKLTDTSKR
LANLVIENTKLSRSLMLKEELVDQLHKQASQRSAEFNALMSRLDTTEKENAFLKYEFHMLEKEIEVRSEELTYSRQSADATRMQHLECVKTVAKLEAECQ
MLRSSSTSKGQNRNFLLEENRSLKETLRKKNAELHSSRGMFSRAASRLSQAEAQLAELSRKGAKAMEPVKHSSDICSDDEVSSSSGSWANALLSELEHFR
YGKVNTQRQDCKAIGSLDMSLMDDFVEMEKFAIVSVGDDASSKNVTSGDDDGDKDQDFDWLQVVLKALMKQQRVSNRSLPELLEDIKIAIGQECVQLSNM
VKENKILKDELQSETEKAEALAKEARDLRTELETVRDEKSMVEEQMENQKSMNEDLDTQLTVAKSKLNEIMQKYSCLEVELEDKTDCCEELESTCLDLQL
QLESVGSNETMNNTITEEEKQSSQNGWEITAASAKLAECQETILNLGKQLKALASPREAALFDKVFNATNGTAIVTTTTNNNNRNIYRRFSLHDQMVAED
KAKAIILYSPKEDSVRKYADRPDEAKGAAECDNKTADMTLVIVPTKRQAGIGFWKKLLMRRKKGGSKKSQSLVKV
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10019839 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.