Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G33925 170 / 1e-55 SSN2 suppressor of sni1 2, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014038 [exp] 55 / 8e-10 AT3G19170 56 / 5e-13 presequence protease 1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G091800 [exp] 197 / 2e-66 AT4G33925 185 / 9e-62 suppressor of sni1 2, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10019878 pacid=23164078 polypeptide=Lus10019878 locus=Lus10019878.g ID=Lus10019878.BGIv1.0 annot-version=v1.0 ATGAGCACTACCACATTGGTTGCTGATACTGTGTGGAAAATCATCGAGTCCACTCGTTCAGTCTCAGAGGATCAACTTCGGATATTGCATTTCTTGTTCG GTAAGAACTTGGAGAGAGCGACGAGAATTGTGGATCAGAAGGGAGTCAAGAGGATTTCTGGTCAACCCAGTGGCCGCTCCATCTTTCAGGTGGTGGGAGA ATCAAAGAGGCAGGAGGAGTACTTGTGCATCCCTGAAAGCTATTGTGGCTGTTATTCGTTTTTCTACGACAATGTCAACAGAGGAGAACAACTTTTCTGT AAGCATCAACTTGCTGCAAGGCTTGGTGCAGCATTGGGGTTATGCATTGAAATTAAATTGCCTGACGAGGAACTGGCACAGTTGCTTGCCAAACTCTGA
AA sequence Show only first row Show all	>Lus10019878 pacid=23164078 polypeptide=Lus10019878 locus=Lus10019878.g ID=Lus10019878.BGIv1.0 annot-version=v1.0 MSTTTLVADTVWKIIESTRSVSEDQLRILHFLFGKNLERATRIVDQKGVKRISGQPSGRSIFQVVGESKRQEEYLCIPESYCGCYSFFYDNVNRGEQLFC KHQLAARLGAALGLCIEIKLPDEELAQLLAKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G33925		SSN2	suppressor of sni1 2, unknown ...		Lus10019878 [exp]	0	1
AT1G67550		URE	urease (.1)		Lus10036993 [exp]	1.0	0.9302
AT5G65980			Auxin efflux carrier family pr...		Lus10001303 [exp]	1.4	0.9051
AT4G14570		AtAARE, AARE	acylamino acid-releasing enzym...		Lus10039405 [exp]	1.7	0.9036
					Lus10041677 [exp]	2.4	0.8918
AT3G55610		P5CS2	delta 1-pyrroline-5-carboxylat...		Lus10001018 [exp]	3.0	0.8898
AT1G20050		HYD1	HYDRA1, C-8,7 sterol isomerase...		Lus10032965 [exp]	7.5	0.8668
AT3G10910			RING/U-box superfamily protein...		Lus10025146 [exp]	8.5	0.8912
AT1G68910		WIT2	WPP domain-interacting protein...		Lus10013053 [exp]	8.8	0.8818
AT5G10110			unknown protein		Lus10022498 [exp]	9.2	0.8536
AT3G45140		ATLOX2, LOX2	ARABIODOPSIS THALIANA LIPOXYGE...		Lus10002547 [exp]	10.2	0.8481

Compare expression of checked genes

Lus10019878 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.