Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27270 287 / 7e-100 Quinone reductase family protein (.1) AT5G54500 286 / 3e-99 FQR1 flavodoxin-like quinone reductase 1 (.1.2) AT4G36750 241 / 1e-80 Quinone reductase family protein (.1) AT5G58800 227 / 6e-76 Quinone reductase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006748 [exp] 359 / 3e-128 AT4G27270 323 / 5e-114 Quinone reductase family protein (.1) Lus10018401 [exp] 333 / 8e-118 AT4G27270 342 / 3e-121 Quinone reductase family protein (.1) Lus10007612 [exp] 333 / 2e-117 AT4G27270 329 / 1e-115 Quinone reductase family protein (.1) Lus10041718 [exp] 244 / 6e-82 AT4G36750 357 / 3e-125 Quinone reductase family protein (.1) Lus10014325 [exp] 236 / 6e-79 AT4G36750 370 / 2e-130 Quinone reductase family protein (.1) Lus10026035 [exp] 236 / 7e-79 AT4G36750 371 / 4e-131 Quinone reductase family protein (.1) Lus10005862 [exp] 224 / 2e-75 AT5G58800 290 / 5e-101 Quinone reductase family protein (.1.2) Lus10040486 [exp] 196 / 2e-63 AT4G36750 291 / 6e-100 Quinone reductase family protein (.1) Lus10024032 [exp] 176 / 2e-56 AT4G36750 248 / 5e-84 Quinone reductase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G028900 [exp] 296 / 2e-103 AT4G27270 352 / 2e-125 Quinone reductase family protein (.1) Potri.011G033100 [exp] 293 / 5e-102 AT4G27270 352 / 1e-125 Quinone reductase family protein (.1) Potri.011G129400 [exp] 292 / 7e-102 AT4G27270 342 / 2e-121 Quinone reductase family protein (.1) Potri.001G410700 [exp] 292 / 9e-102 AT4G27270 345 / 1e-122 Quinone reductase family protein (.1) Potri.009G044400 [exp] 238 / 2e-80 AT5G58800 322 / 3e-113 Quinone reductase family protein (.1.2) Potri.005G126200 [exp] 236 / 5e-79 AT4G36750 361 / 4e-127 Quinone reductase family protein (.1) Potri.007G029600 [exp] 235 / 2e-78 AT4G36750 362 / 3e-127 Quinone reductase family protein (.1) Potri.004G151100 [exp] 216 / 8e-71 AT4G36750 311 / 4e-107 Quinone reductase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0042 [flax] [poplar] Flavoprotein PF03358 [flax] [poplar] FMN_red NADPH-dependent FMN reductase
Representative CDS sequence Show only first row Show all	>Lus10020076 pacid=23156204 polypeptide=Lus10020076 locus=Lus10020076.g ID=Lus10020076.BGIv1.0 annot-version=v1.0 ATGTACGGACATGTTGAGAAATTAGCTGAAGAGATTAAGAAAGGAGCTTCAACTGTTGATGGAGTTGAAGTTAAACTATGGCAGGTAGCAGAGACACTGC CAGAAGAGGTTCTTGGCAAAATGGGTGCGCCAGCAAAGAAGAGTGAAGTGCCAATCGTCACTGCCAGTGAGCTTGCAGAAGCTGATGGCATTCTTTTCGG GTTCCCAACTCGGTTCGGCATGATGGCTGCTCAATTCAAGGCTTTCATGGACTCAACTGGAGGCCTTTGGAAGACACAGGCGCTTCAAGGGAAGCCTGCT GGACTTTTCTACTCCACTGGCTCCCAAGGTGGTGGCCAGGAGACCACCCCGTTGACAGCGATAACGCAGCTAGTTCACCACGGAATGTTGTTCGTGCCGG TGGGATACACATTCGGAGGAGGGATGTTCGAGATGGAAGAGGTGAAAGGGGGGAGTCCATATGGTGCAGGGACATATGCAGGAGATGGATCCAGGCAGCC TAGTGATCTTGAGTTGGGTTTGGCTCATCACCAGGGCAAGCATTTTGCTGCCATCGCCAAGAAATTGAAGGGTTCTGAATCTGATGCTTGA
AA sequence Show only first row Show all	>Lus10020076 pacid=23156204 polypeptide=Lus10020076 locus=Lus10020076.g ID=Lus10020076.BGIv1.0 annot-version=v1.0 MYGHVEKLAEEIKKGASTVDGVEVKLWQVAETLPEEVLGKMGAPAKKSEVPIVTASELAEADGILFGFPTRFGMMAAQFKAFMDSTGGLWKTQALQGKPA GLFYSTGSQGGGQETTPLTAITQLVHHGMLFVPVGYTFGGGMFEMEEVKGGSPYGAGTYAGDGSRQPSDLELGLAHHQGKHFAAIAKKLKGSESDA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G27270			Quinone reductase family prote...		Lus10020076 [exp]	0	1
AT5G58320			Kinase interacting (KIP1-like)...		Lus10019111 [exp]	1.0	0.8990
AT3G20340			unknown protein		Lus10021518 [exp]	2.4	0.8632
AT1G66230	MYB	ATMYB20	myb domain protein 20 (.1)		Lus10027197 [exp]	4.0	0.8681
AT5G15870			glycosyl hydrolase family 81 p...		Lus10021987 [exp]	4.2	0.8677
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10021202 [exp]	6.3	0.8609
AT1G22170			Phosphoglycerate mutase family...		Lus10033465 [exp]	7.7	0.8437
AT5G02090			unknown protein		Lus10024357 [exp]	7.9	0.8625
AT4G17980	NAC	ANAC071	NAC domain containing protein ...		Lus10030978 [exp]	8.2	0.8300
AT1G52330			Late embryogenesis abundant (L...		Lus10037534 [exp]	11.4	0.8639
AT3G60600		(AT)VAP, (AT)VA...	VAMP/SYNAPTOBREVIN-ASSOCIATED ...		Lus10028937 [exp]	12.6	0.8303

Compare expression of checked genes

Lus10020076 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.