Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002439 [exp] 40 / 0.0005 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10020157 pacid=23141951 polypeptide=Lus10020157 locus=Lus10020157.g ID=Lus10020157.BGIv1.0 annot-version=v1.0 ATGATTGACAAGTGTCTCCCGTCGGTTACTCTCCCTGTAACCGGTGCGCAGGTAGGTAGTCAGGGAAAAGCTTCGTATGCCGCTGCTGTCGCTATAGGGA TCTTAGATCCTCAGCCGAGTCTCCGTCCTCGGAAATCGTACGTTGTGGGATCTAATGATATTGCGCCGAGTCATAAGAATGGTTTTGGCCAGCTAAACAT CTCGTGGGAGCTCCGGGAAAGAATCTGTGCTCCGTTGAAGAAAACCCTTGGTGTTCATCTCTTGGGTGGAATGAAGCAGGGAGGCTCGGCGCATTCACAG TCATCACAAGGAAAAAAATCTTCTAAATCCCTAATTCCAGCTAAGGGTTTGAATGCTGTGGGATCGGCTAAAGCGATGGGTTTGGTTGGTGGTGGTTGGG CTCTAGTTGTAGCCCAGATATCTCTATTTCGGTGGGCTGCGACTCCAAGCCCAGCACGTCTAGCGTTTCTTCCACGGGTGAGCCCATTCAATTTAGTGCC CATACAAAGCTCGTCAAGCCCCCTTCGATCCAAAAGGAGTCAACGCGAACTGCTATCCCTCCTCCTTCTCTTGCTGAACATCATCCTATTTCCTCTTATG TTACTCCTCTGGTCAACTCGTCGGAGATCGTTGAATTGA
AA sequence Show only first row Show all	>Lus10020157 pacid=23141951 polypeptide=Lus10020157 locus=Lus10020157.g ID=Lus10020157.BGIv1.0 annot-version=v1.0 MIDKCLPSVTLPVTGAQVGSQGKASYAAAVAIGILDPQPSLRPRKSYVVGSNDIAPSHKNGFGQLNISWELRERICAPLKKTLGVHLLGGMKQGGSAHSQ SSQGKKSSKSLIPAKGLNAVGSAKAMGLVGGGWALVVAQISLFRWAATPSPARLAFLPRVSPFNLVPIQSSSSPLRSKRSQRELLSLLLLLLNIILFPLM LLLWSTRRRSLN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10020157 [exp]	0	1
AT3G22830	HSF	AT-HSFA6B	ARABIDOPSIS THALIANA HEAT SHOC...		Lus10006618 [exp]	3.9	0.9447
AT3G21945			Receptor-like protein kinase-r...		Lus10028980 [exp]	4.5	0.9126
AT5G06250	B3		AP2/B3-like transcriptional fa...		Lus10021326 [exp]	5.5	0.9387
AT2G01900			DNAse I-like superfamily prote...		Lus10031310 [exp]	9.6	0.9227
AT1G30700			FAD-binding Berberine family p...		Lus10009009 [exp]	14.4	0.8715
AT1G31690			Copper amine oxidase family pr...		Lus10013356 [exp]	21.8	0.9166
AT4G12520			Bifunctional inhibitor/lipid-t...		Lus10024616 [exp]	23.2	0.9219
					Lus10005394 [exp]	25.0	0.9182
AT1G68150	WRKY	ATWRKY9, WRKY9	WRKY DNA-binding protein 9 (.1...		Lus10035971 [exp]	28.4	0.9166
					Lus10018952 [exp]	31.0	0.8526

Compare expression of checked genes

Lus10020157 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.