Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G07020 535 / 0 UGT80A2, SGT UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) AT1G43620 406 / 7e-135 UGT80B1, TT15 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) AT5G24750 64 / 1e-10 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009556 [exp] 855 / 0 AT3G07020 707 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10024544 [exp] 637 / 0 AT3G07020 714 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10020382 [exp] 589 / 0 AT3G07020 790 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10011882 [exp] 549 / 0 AT3G07020 885 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10022815 [exp] 479 / 8e-165 AT3G07020 742 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10011883 [exp] 425 / 4e-143 AT3G07020 648 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10018878 [exp] 417 / 8e-139 AT1G43620 849 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Lus10028572 [exp] 412 / 1e-136 AT1G43620 840 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Lus10009557 [exp] 247 / 8e-78 AT3G07020 261 / 6e-83 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G238600 [exp] 544 / 0 AT3G07020 839 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.014G178300 [exp] 538 / 0 AT3G07020 817 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.002G067100 [exp] 424 / 1e-141 AT1G43620 800 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Potri.005G193100 [exp] 421 / 2e-140 AT1G43620 805 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Potri.003G021100 [exp] 69 / 4e-12 AT5G24750 606 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10020381 pacid=23144050 polypeptide=Lus10020381 locus=Lus10020381.g ID=Lus10020381.BGIv1.0 annot-version=v1.0 ATGGACGAGTATCCTAGGCGAGGTTCGAATTACAACGGTAAGGATGATTTACTGCTGGGTTTTAGTATTCAAAATGCTGAGGATGCCACTTGGTCAAATT TGAATTTCTCTGGTTCATTTCCTATTCAAAATGCTGAGATCGTCCAACTGTTTGCAGGGGTTGGGGGGAACTCAAGAGAATCAGATTCAGCTTCCCGTCA TCAGCCAAAGGATGTCAAATCTGGAGAGTTTGAGACATTGGATGATGCACTGGAAGCAGAACTGTTACGTGAAAAGTTAGCTATGGAAAAGAAGGTCGTC TCCATAACAATTTACTTATTGGTGTTGCTTTGTGCCGATGGAGGACTGAAGTTATATAATCAGCTGGCTAAAATTCAAGAAGATGGAACTGTTCGATTTG AAGTCCCTGGAGATATAGAACCACGTAGCCTTGAAATTCAGCCACTGGTTTATTCTCAAGCTGTGGAAGAGGATTCTATCGACACAGAGGTCATGAAAGA TATACCTCCATTGCAAATTGTAATGCTTATAGTTGGAACTCGAGGAGATGTGCAACCATTTGCTGCCATTGGACAACGTTTGCAGAATAAAGGTTTCTTT CCGTCGGATCCTTCAGAAATACCGATACAGAGGCAGCAAATGAGAGAAATCATATTCTCTTTATCTGCTGCATGCACAGATCCAGACCCCAATACCAAAG TTCGATTCAAGGCAGAAGCCATAATCGCCAATCCCCCAACATATGTTGTGATGCTTTGCCTATCTATCAGGGCTACTAATGAATTCCCACATCCTTTCAC TCGTGTCAAGCAACCAGCTGCGTATAGGTTATCTTATCAAATAATTGACGCGCTTGTCTGGATTGGAATAGGAAATCTGATTAGCGAGTATAGAAAGAAA CACCTGAAGCTAAGACCTGTTACATATTTAAGTGGATCCCATAGCTCCAGAATGGAGTTGCCTTTTTGTTATATATGGAGCCCTCACCTCGTTCCCAAAC CAAAAGACTGGGGTCCAAAATTGGACATCGTCGGCTTTTGCTTTCTTGACCTTGTCACGAACTATGAACCTCCTGCTGCTCTTAAGGACTGGCTAGGAAG TGGCGATGCGCCTATCTATATTGGGTTTGGGAGCCTTCCTGTTCAAGAACCGGAGGAGATGATGGAGGTGATCATCAAGGCCCTGGAATTAACTGGTCAA AGGGGCATCCTAAACAAAGGCTGGGGTGGATTGGGGAATTTGGTGAAACCCAATAAGAATGTTTACTCACTGGACAGTTGCCCCCATGATTGGTTGTTCT TTCGATGCAGAGCTGTGGTCCATCACGGTGGAGCTGGAACAACAGCTGCTGGTCTCAGAGCTGCGTGTCCTACGACGATCGTTCCATTCTTTGGAGACCA GTTCTTCTGGGGGGAGCAGGTCCATGCTCGAGGAGTAGGCCCAGCGCCTATCCCTGTCGAAGATTTCTCCACCGAGAAGCTGGTTTACGCCATCGAATAC ATGCTCGATCCCCGGGTGAAACAGCGGGCAGTCGATTTGGCCAAGGCAATGGAGAAGGAGGATGGAGTTGCAGGTGCAGTAAAGGCCTTTTATAAACACT TCCCTGTTAAGAAGATCGAATCTATTGATCTACAGCCGGATCGAAACGGTTTGAAGATGAACAAGCCGTCTCGTTCGAAGTTTTCGTTCCGTAGATTTTT ACAGTTGAAATAG
AA sequence Show only first row Show all	>Lus10020381 pacid=23144050 polypeptide=Lus10020381 locus=Lus10020381.g ID=Lus10020381.BGIv1.0 annot-version=v1.0 MDEYPRRGSNYNGKDDLLLGFSIQNAEDATWSNLNFSGSFPIQNAEIVQLFAGVGGNSRESDSASRHQPKDVKSGEFETLDDALEAELLREKLAMEKKVV SITIYLLVLLCADGGLKLYNQLAKIQEDGTVRFEVPGDIEPRSLEIQPLVYSQAVEEDSIDTEVMKDIPPLQIVMLIVGTRGDVQPFAAIGQRLQNKGFF PSDPSEIPIQRQQMREIIFSLSAACTDPDPNTKVRFKAEAIIANPPTYVVMLCLSIRATNEFPHPFTRVKQPAAYRLSYQIIDALVWIGIGNLISEYRKK HLKLRPVTYLSGSHSSRMELPFCYIWSPHLVPKPKDWGPKLDIVGFCFLDLVTNYEPPAALKDWLGSGDAPIYIGFGSLPVQEPEEMMEVIIKALELTGQ RGILNKGWGGLGNLVKPNKNVYSLDSCPHDWLFFRCRAVVHHGGAGTTAAGLRAACPTTIVPFFGDQFFWGEQVHARGVGPAPIPVEDFSTEKLVYAIEY MLDPRVKQRAVDLAKAMEKEDGVAGAVKAFYKHFPVKKIESIDLQPDRNGLKMNKPSRSKFSFRRFLQLK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G07020		UGT80A2, SGT	UDP-glucosyl transferase 80A2,...		Lus10020381 [exp]	0	1
AT3G10960		ATAZG1	AZA-guanine resistant1 (.1)		Lus10025246 [exp]	2.0	0.8412
AT4G08910			unknown protein		Lus10025524 [exp]	5.2	0.8193
AT4G37870		PCK1, PEPCK	phosphoenolpyruvate carboxykin...		Lus10011582 [exp]	8.5	0.8076
AT2G40540		ATKUP2, ATKT2, ...	potassium transporter 2 (.1.2)		Lus10018270 [exp]	8.7	0.7518
					Lus10024103 [exp]	9.7	0.7984
AT1G58025			DNA-binding bromodomain-contai...		Lus10036580 [exp]	11.5	0.6566
					Lus10007244 [exp]	11.8	0.7799
AT4G35230		BSK1	BR-signaling kinase 1 (.1)		Lus10034573 [exp]	16.1	0.7598
					Lus10004033 [exp]	16.5	0.6561
					Lus10018908 [exp]	17.0	0.7499

Compare expression of checked genes

Lus10020381 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.