Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G44870 182 / 6e-56 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009575 [exp] 382 / 1e-134 AT2G44870 219 / 2e-71 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G030100 [exp] 236 / 5e-77 AT2G44870 249 / 3e-83 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10020395 pacid=23144055 polypeptide=Lus10020395 locus=Lus10020395.g ID=Lus10020395.BGIv1.0 annot-version=v1.0 ATGGCTGCCGGTTTGCTCCGCCACCATCCTCTCCCGCCGCGCCTCCCGCCTCCCACGCCATGCCTCCTCCGCCGCGGCAACGTCACTCTTCCGGCTCTCT CTTTTCGCCGCCGTGTAACCGTCGTGCGGGCTTCTGGAAGCAACGGCGACTTCGATAGGTTCGCGCGGAAAGCCTGGCGCACCGCGAACGACGGTTTCGA GCTGTTCCTGTTCGAGGCCAAGAAGACCGTCGAGCGCATTGACAGGAAATACTCCGTCGGGAAACGTCTTAGCGTGGTGACGCAGTCTGCTGTGGATAGG GCGCGTTTGATCGATAGGGATTTCAATCTCACTCCTCGCTGGCGTGCCTTCTCCATGGATTTCTCTAGAAATTGGCCTAGGGTTTCTGCTCCTTCCCTCA ATCTCCTTATCTCATTCCTCTACTATTACAGGAAGCAACTCAGTGACTTGATGAATACTCCCTTGGGAAGAGTTTTCTATCAGTATGTGGAAGCTGCTCA TGAGCTGTATGTTGAACTTGTTCCCACCATTGCCCCCGTTAAGCTCTGTATATTAGTATCAGTTTCAGCTTTGTTCTTCCTCTGGTTTGCTCTATCAGGG TGGCTGTTTCGGTTCCTCATATTTGGTTCATTTGTTCTGCCGCTTGCGGGGCCTCTTATCATAGCCGCTATTGGGAATAATTTTGTCATCAAGACAATTA TTGACCTTCACAGTTCATTCATGGAAAAACCTGTAAGCCTCTCCACCATGGCTGACAACTATGGTGCTGTCCAATCATTTCTGCAGGGGTCTTGTCCAGC TTGTAAGCAAGATTTCATGGGCATAAAAACCAGGCAAATACGCTGCACCGGGTGTGGCAACATTGTCTGGTACCCTGAAGATTCAGGAGGCGGCAGTGGC CCCGGTAAGCAAGGAAACCGACCTTCAAAGTCCGATCCTAACATAATCGACGTGGAGTTCGAAGAGAGATAA
AA sequence Show only first row Show all	>Lus10020395 pacid=23144055 polypeptide=Lus10020395 locus=Lus10020395.g ID=Lus10020395.BGIv1.0 annot-version=v1.0 MAAGLLRHHPLPPRLPPPTPCLLRRGNVTLPALSFRRRVTVVRASGSNGDFDRFARKAWRTANDGFELFLFEAKKTVERIDRKYSVGKRLSVVTQSAVDR ARLIDRDFNLTPRWRAFSMDFSRNWPRVSAPSLNLLISFLYYYRKQLSDLMNTPLGRVFYQYVEAAHELYVELVPTIAPVKLCILVSVSALFFLWFALSG WLFRFLIFGSFVLPLAGPLIIAAIGNNFVIKTIIDLHSSFMEKPVSLSTMADNYGAVQSFLQGSCPACKQDFMGIKTRQIRCTGCGNIVWYPEDSGGGSG PGKQGNRPSKSDPNIIDVEFEER

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G44870			unknown protein		Lus10020395 [exp]	0	1
AT5G48730			Pentatricopeptide repeat (PPR)...		Lus10011849 [exp]	2.4	0.8177
AT5G66520			Tetratricopeptide repeat (TPR)...		Lus10031423 [exp]	2.4	0.8316
AT1G76890	Trihelix	AT-GT2, GT2	Duplicated homeodomain-like su...		Lus10033504 [exp]	2.4	0.8104
AT2G22360			DNAJ heat shock family protein...		Lus10000631 [exp]	3.5	0.8307
AT3G02660		EMB2768	EMBRYO DEFECTIVE 2768, Tyrosyl...		Lus10038795 [exp]	6.0	0.8161
AT4G14030		SBP1	selenium-binding protein 1 (.1...		Lus10035760 [exp]	6.7	0.8056
AT5G06340		ATNUDX27	nudix hydrolase homolog 27 (.1...		Lus10029398 [exp]	8.8	0.7911
AT4G22220		ATISU1, ISU1	SufE/NifU family protein (.1)		Lus10042112 [exp]	9.4	0.8035
AT2G01060	GARP		myb-like HTH transcriptional r...		Lus10039124 [exp]	10.1	0.7533
AT1G07780		TRP6, PAI1	TRANSIENT RECEPTOR POTENTIAL 6...		Lus10028971 [exp]	10.2	0.7905

Compare expression of checked genes

Lus10020395 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.