Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G64380 529 / 0 Inositol monophosphatase family protein (.1) AT3G54050 259 / 1e-82 HCEF1 high cyclic electron flow 1 (.1.2) AT1G43670 222 / 2e-69 FINS1, AtcFBP FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) AT3G55800 71 / 2e-13 SBPASE sedoheptulose-bisphosphatase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007061 [exp] 690 / 0 AT5G64380 549 / 0.0 Inositol monophosphatase family protein (.1) Lus10027748 [exp] 257 / 6e-82 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10035545 [exp] 257 / 6e-82 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10021115 [exp] 253 / 2e-80 AT3G54050 647 / 0.0 high cyclic electron flow 1 (.1.2) Lus10017195 [exp] 226 / 3e-70 AT3G54050 601 / 0.0 high cyclic electron flow 1 (.1.2) Lus10028580 [exp] 218 / 1e-67 AT1G43670 618 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Lus10018885 [exp] 218 / 1e-67 AT1G43670 620 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Lus10040228 [exp] 70 / 5e-13 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1) Lus10028261 [exp] 69 / 1e-12 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G042900 [exp] 585 / 0 AT5G64380 552 / 0.0 Inositol monophosphatase family protein (.1) Potri.016G106900 [exp] 252 / 3e-80 AT3G54050 619 / 0.0 high cyclic electron flow 1 (.1.2) Potri.016G109000 [exp] 240 / 1e-75 AT3G54050 526 / 0.0 high cyclic electron flow 1 (.1.2) Potri.005G191400 [exp] 216 / 6e-67 AT1G43670 609 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.002G069000 [exp] 210 / 8e-65 AT1G43670 619 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.010G193300 [exp] 78 / 1e-15 AT3G55800 625 / 0.0 sedoheptulose-bisphosphatase (.1) Potri.008G063800 [exp] 77 / 3e-15 AT3G55800 629 / 0.0 sedoheptulose-bisphosphatase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0171 [flax] [poplar] Phospoesterase PF00316 [flax] [poplar] FBPase Fructose-1-6-bisphosphatase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10020433 pacid=23139537 polypeptide=Lus10020433 locus=Lus10020433.g ID=Lus10020433.BGIv1.0 annot-version=v1.0 ATGGCTTCCTCTGGTTCTGTATTTAGCGCGAAGTCGCAACTCAGTTCACCCTCGAAGAATGACGATGCCGTGTACACTCTGATGGAGTATATGGGAAAGA GCGGAGTCGGTTTGGGTGATGACTTGGTTGTTCTATTCGATCATTTGCAGTACACTTCTAAGCGAATCGCCGCCCTTGTTGCTTCTCCTTTTAATTCCAG TCTCGGAAAGCAAAACGACGCCGTTAGCAGCAGCAGCGTCGGGTCGGAGAGGGATGCGCCGAAGCCGCTCGACATATTGTCTGTATGTTCCGTCCCCTCT CCCGCCATTCAGTCTGCAGAATTTCCTGATAGTTTATTGGGATCGGATGCTTTTCCTTTAGAGCAAATCCCTAATAATGAGATCATCTTATCAAGTCTTC GAAATTCGGGGAAGGTTGCGGTCATGGCTTCTGAAGAAGATAACCAACCGATTTGGATACACGAAGATGCACCATTTGTTGTGGTAACAGACCCCCTTGA CGGTTCCCGGAACATAGATGCGTCTATCCCCACAGGAACTATATTTGGGGTATACAAACGCCTTGAAGAACTGGACCACCTCCCTCAAGAGGAGAAAGCT ATGCTCAATTCGTTACAGAGTGGAGCCAGACTTGTGGCTGCTGCTTACGTTCTTTATTCATCAGCTACCATATTTTGCACCAGCTTTGGCTCTGGAACAC ATGCATTTACCTTGGATCGCACTACTGGAGACTTTGTTCTCACTCATCCAGGGATCAATATTCCTCCTCGAGGGCAAATATACTCCGTGAATGATGCACG GTACTTTGACTGGCCGGAAGGACTAAGGCGTTATATCGACACAGTGAGGCAAGGGAAAGGAAGATATCCCAAGAAGTACTCTGCCCGCTACATATGTTCT CTAGTTGCTGATTTGCATCGGACGCTGCTGTATGGTGGAATTGCAATGAACCCAAGGGATCATCTTCGGCTTGTTTATGAAGCTAATCCTCTCAGCTTTC TGGTAGAGCAAGCTGGGGGGAAAGGTTCCGATGGTCGAAGTAGGATACTTTCCCTCCAACCAGTGAAGCTGCACCAAAGACTTCCTTTATTCTTGGGAAG TCCAGAGGACATAGAAGAGTTAGAGAGTTATGGGGACGTTCAGCAGAGAGTAAATCCTGGTTATGAAGTTTGA
AA sequence Show only first row Show all	>Lus10020433 pacid=23139537 polypeptide=Lus10020433 locus=Lus10020433.g ID=Lus10020433.BGIv1.0 annot-version=v1.0 MASSGSVFSAKSQLSSPSKNDDAVYTLMEYMGKSGVGLGDDLVVLFDHLQYTSKRIAALVASPFNSSLGKQNDAVSSSSVGSERDAPKPLDILSVCSVPS PAIQSAEFPDSLLGSDAFPLEQIPNNEIILSSLRNSGKVAVMASEEDNQPIWIHEDAPFVVVTDPLDGSRNIDASIPTGTIFGVYKRLEELDHLPQEEKA MLNSLQSGARLVAAAYVLYSSATIFCTSFGSGTHAFTLDRTTGDFVLTHPGINIPPRGQIYSVNDARYFDWPEGLRRYIDTVRQGKGRYPKKYSARYICS LVADLHRTLLYGGIAMNPRDHLRLVYEANPLSFLVEQAGGKGSDGRSRILSLQPVKLHQRLPLFLGSPEDIEELESYGDVQQRVNPGYEV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G64380			Inositol monophosphatase famil...		Lus10020433 [exp]	0	1
AT4G02405			S-adenosyl-L-methionine-depend...		Lus10015003 [exp]	1.0	0.9574
AT2G12400			unknown protein		Lus10008813 [exp]	1.4	0.9452
AT3G14470			NB-ARC domain-containing disea...		Lus10004126 [exp]	2.8	0.9346
AT5G03900			Iron-sulphur cluster biosynthe...		Lus10021361 [exp]	3.3	0.9273
AT3G14470			NB-ARC domain-containing disea...		Lus10004127 [exp]	3.7	0.9295
AT5G64380			Inositol monophosphatase famil...		Lus10007061 [exp]	3.9	0.9331
AT3G19340			Protein of unknown function (D...		Lus10031975 [exp]	5.8	0.9027
AT2G29650		PHT4;1, ANTR1	anion transporter 1, phosphate...		Lus10040686 [exp]	6.0	0.9348
AT3G15354		SPA3	SPA1-related 3 (.1)		Lus10019475 [exp]	6.5	0.9322
AT2G41150			unknown protein		Lus10023250 [exp]	8.8	0.8795

Compare expression of checked genes

Lus10020433 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.