Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G37370 598 / 0 CYP81D8 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) AT4G37340 582 / 0 CYP81D3 "cytochrome P450, family 81, subfamily D, polypeptide 3", cytochrome P450, family 81, subfamily D, polypeptide 3 (.1) AT4G37360 562 / 0 CYP81D2 "cytochrome P450, family 81, subfamily D, polypeptide 2", cytochrome P450, family 81, subfamily D, polypeptide 2 (.1) AT4G37330 562 / 0 CYP81D4 "cytochrome P450, family 81, subfamily D, polypeptide 4", cytochrome P450, family 81, subfamily D, polypeptide 4 (.1) AT4G37320 551 / 0 CYP81D5 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) AT5G36220 548 / 0 CYP91A1, CYP81D1 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) AT2G23190 542 / 0 CYP81D7 "cytochrome P450, family 81, subfamily D, polypeptide 7", cytochrome P450, family 81, subfamily D, polypeptide 7 (.1) AT3G28740 536 / 0 CYP81D11, CYP81D1 cytochrome P450, family 81, subfamily D, polypeptide 11, Cytochrome P450 superfamily protein (.1) AT4G37400 522 / 0 CYP81F3 "cytochrome P450, family 81, subfamily F, polypeptide 3", cytochrome P450, family 81, subfamily F, polypeptide 3 (.1) AT2G23220 519 / 0 CYP81D6 "cytochrome P450, family 81, subfamily D, polypeptide 6", cytochrome P450, family 81, subfamily D, polypeptide 6 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011958 [exp] 546 / 0 AT5G36220 548 / 0.0 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) Lus10018717 [exp] 532 / 0 AT4G37370 533 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024816 [exp] 523 / 0 AT4G37370 506 / 2e-176 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10027614 [exp] 509 / 1e-178 AT4G37370 496 / 6e-174 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024819 [exp] 470 / 3e-162 AT4G37320 493 / 3e-171 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) Lus10024820 [exp] 464 / 8e-160 AT5G36220 493 / 2e-171 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) Lus10024818 [exp] 456 / 1e-156 AT4G37320 480 / 2e-166 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) Lus10018711 [exp] 431 / 7e-147 AT4G37370 441 / 5e-151 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024078 [exp] 426 / 5e-145 AT4G37320 437 / 3e-149 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G050000 [exp] 576 / 0 AT4G37370 509 / 3e-178 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.005G143800 [exp] 551 / 0 AT4G37370 539 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G006000 [exp] 541 / 0 AT4G37370 526 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G008200 [exp] 535 / 0 AT4G37370 531 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G007000 [exp] 534 / 0 AT4G37370 525 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.008G205200 [exp] 526 / 0 AT4G37370 524 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G007900 [exp] 520 / 0 AT4G37370 524 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.014G020500 [exp] 511 / 1e-178 AT4G37370 462 / 2e-159 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.005G143900 [exp] 508 / 2e-177 AT4G37370 511 / 5e-179 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.007G049900 [exp] 504 / 4e-176 AT4G37370 490 / 1e-170 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [flax] [poplar] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Lus10020437 pacid=23139599 polypeptide=Lus10020437 locus=Lus10020437.g ID=Lus10020437.BGIv1.0 annot-version=v1.0 ATGGAGGCCTCGTACGACATCTTAAACTACTATTTCCTTCTCCCCATTATTTTCATTTTCCCCATCCTCCTCCTAGCTCTCAAATCCACAACCTCCCGCC GCAAGAAGCTTCCTCCGAGCCCATCGTCGGCGATCCCATTCCTGGGCCACGTCCATCTATTGAAACCACCAATCCACCGCACCTTCGACGCCTTAGCCCA ACAATACGGCCCAATCATCTCCCTCCGTCTTGGCACCCGCCCAACCCTCCTAGTTTCATCCGCTTCCTTAGCCGAGGAATGCTTCACCAAAAACGACATC GTCTTCGCGAACCGTCCACAGTTGATGATGGGTAAGCACATGGGGTACAACCACACCACAATGACGCAAACATCTTACGGGGACCACTGGCGCAACCTCC GCCGCATCGGCTCCCTCGAGATCTTCTCCGCCCACCGCCTCAACTCCTTCCTTTCCATCCGTCGGGATGAGGTCAACCGCCTCGTGGTCAGGCTTAGCTC CACGCGCCGGCATGAGCTGAAGTCCATGTTCCACGAGCTGACGTTCAACACCATGATGAGGATGGTGGCGGGGAAGAGGTATTACGGTGATGACGTGAAG GATGAGGATGAGGAAGAGGCAAGGCGGTTCAGGGAGATCATGAAGGAGGTGGTGTCTCTCGGCGGGGCGTCCAACCCTGGGGATTTCGTGCCACTGTTGA GGTGGGTGGACGGTGGGAAATTGGAGAAGAGAGTGACGTGGCTGGCTGAGAGAACGGACAGGTTCTTGCAAGGATTGATTGAGGAGCATCGGAGTAAGAA GCAGGATTTGGAGAGTATGAATACTATGATCGACCACTTGCTTGCTTTGCAGGAATCTCAACCTGAATATTACACTGACCACATTATCAAAGGCCTTATT CTCGTCATGTTATTGGCAGGAACCGACACATCAGCAGTAACATTAGAGTGGGCAATGTCAAACCTTCTCAACAACCCCAACATATTAGCAAAGGCGAGAA TTGAACTGGACGAGCAAGTCGGGCAAGAACGCCTAGTCGATGAGCAAGACATTTCCAGCCTTCCTTACCTGCAGAACATTATCTCTGAAACGCTGCGACT GTATCCTGCTGCGCCACTCCTGGTCCCACACATGTCTTCTGATGATTGTGAGATCGGAGGATATCACGTCCCTCGCGGCACCATGTTATTGGTCAATGCA TGGGCTATTCACAGGGACCCTCATCTTTGGGAAGATCCTTTGAGTTTTAAACCTGAGAGGTATGAAAACAAAGCCAAGGAAAGTTTCAAGCTGATGCCTT TTGGACTTGGAAGAAGGGCTTGTCCAGGTGCAGGCCTGGCTCAACGAGTTGTGGGTCTTACACTCAGCACGTTAATTCAATGCTTCGAATGGGAGAGGTT AGGTATGGAAGAGATTGACATGACAGAAGGAAAAGGAATCACGATGCCTAAAGCAACGCCTTTGGAGGCTATCTGCATTGCTCGTCCAATTGTGAAGAAG TTTTTCTAG
AA sequence Show only first row Show all	>Lus10020437 pacid=23139599 polypeptide=Lus10020437 locus=Lus10020437.g ID=Lus10020437.BGIv1.0 annot-version=v1.0 MEASYDILNYYFLLPIIFIFPILLLALKSTTSRRKKLPPSPSSAIPFLGHVHLLKPPIHRTFDALAQQYGPIISLRLGTRPTLLVSSASLAEECFTKNDI VFANRPQLMMGKHMGYNHTTMTQTSYGDHWRNLRRIGSLEIFSAHRLNSFLSIRRDEVNRLVVRLSSTRRHELKSMFHELTFNTMMRMVAGKRYYGDDVK DEDEEEARRFREIMKEVVSLGGASNPGDFVPLLRWVDGGKLEKRVTWLAERTDRFLQGLIEEHRSKKQDLESMNTMIDHLLALQESQPEYYTDHIIKGLI LVMLLAGTDTSAVTLEWAMSNLLNNPNILAKARIELDEQVGQERLVDEQDISSLPYLQNIISETLRLYPAAPLLVPHMSSDDCEIGGYHVPRGTMLLVNA WAIHRDPHLWEDPLSFKPERYENKAKESFKLMPFGLGRRACPGAGLAQRVVGLTLSTLIQCFEWERLGMEEIDMTEGKGITMPKATPLEAICIARPIVKK FF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G37370		CYP81D8	"cytochrome P450, family 81, s...		Lus10020437 [exp]	0	1
AT1G78780			pathogenesis-related family pr...		Lus10042792 [exp]	1.0	0.9649
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016469 [exp]	4.7	0.9544
AT3G14690		CYP72A15	"cytochrome P450, family 72, s...		Lus10042487 [exp]	5.5	0.9389
AT5G61820			unknown protein		Lus10003210 [exp]	6.2	0.9268
AT5G17000			Zinc-binding dehydrogenase fam...		Lus10004379 [exp]	6.7	0.9503
AT1G75130		CYP721A1	"cytochrome P450, family 721, ...		Lus10016310 [exp]	10.6	0.9386
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10021102 [exp]	11.1	0.9441
AT3G22600			Bifunctional inhibitor/lipid-t...		Lus10039348 [exp]	11.5	0.9389
AT4G13180			NAD(P)-binding Rossmann-fold s...		Lus10010673 [exp]	12.7	0.9357
AT2G30140			UDP-Glycosyltransferase superf...		Lus10042261 [exp]	12.8	0.9407

Compare expression of checked genes

Lus10020437 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.