Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G64440 162 / 2e-46 ATFAAH fatty acid amide hydrolase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007095 [exp] 292 / 1e-94 AT5G64440 776 / 0.0 fatty acid amide hydrolase (.1) Lus10020468 [exp] 174 / 1e-50 AT5G64440 781 / 0.0 fatty acid amide hydrolase (.1) Lus10007094 [exp] 169 / 9e-49 AT5G64440 795 / 0.0 fatty acid amide hydrolase (.1) Lus10016685 [exp] 91 / 7e-21 AT5G64440 453 / 2e-152 fatty acid amide hydrolase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G285900 [exp] 204 / 7e-62 AT5G64440 769 / 0.0 fatty acid amide hydrolase (.1) Potri.005G070300 [exp] 108 / 5e-27 AT5G64440 488 / 1e-166 fatty acid amide hydrolase (.1) Potri.007G098600 [exp] 102 / 7e-25 AT5G64440 478 / 2e-162 fatty acid amide hydrolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01425 [flax] [poplar] Amidase Amidase
Representative CDS sequence Show only first row Show all	>Lus10020469 pacid=23139533 polypeptide=Lus10020469 locus=Lus10020469.g ID=Lus10020469.BGIv1.0 annot-version=v1.0 ATGGAGCAGGTTCATGAGTTTCTTGAAGAGTTGCTGCGTTCAGATGCTAAGTCACCTGATGAAGGAGCTATGCCAGAAAAACAGTCAAGAGTTATGATGA TGTATCCAGAACCTGGTGTGTATATTGTAGATGAACTCGGAACTCCGGAAGAAAGGGTAGCATCAACCTTAATATGTCTTCCTGATTACAATCCTGCTCA GTCCTTGGATGAGATTTCAGTCACATCTTTCAGATACTGGAAGATTCGTGACTACGCACATGCTTATCGGTCTAAGGTTGTTACGCCCTCAATGGTGGCT GAGAATATAATATTAGGTTTGAAGGATTTTGATGGGCAAAGTCCACCCTGCCCGTTGTTGATTTCTTCCGATGTTGAGGTTACAAGGAAGCAAGCTGCAG CGTCCACTCAGAGGTTCAGTGAAGGTGCAACCACATGGATGAATGAGGTTCGTCCTGTGAAAGATGATGCAGTTTCTGTTTATAGGCTGCGTAGCTGTGG CGTGATATTTTTCGGGAAGGCAAACATGCATGAGCTAGGCATAGGAACCACAGGGAATAATCCGACATACGGGAGAAGGATAATGCATCATCACATGGAA ATTTTCAAAAATGTTGATATCATTGTTACTCCTACAACTGGAACGACAGCACCTCTAATCCCTCGCGGTGCTCTCAAGTACGGAGAGAGTGACATGAAGA CTACAGGGTTTTTTTTCACTTTCTAA
AA sequence Show only first row Show all	>Lus10020469 pacid=23139533 polypeptide=Lus10020469 locus=Lus10020469.g ID=Lus10020469.BGIv1.0 annot-version=v1.0 MEQVHEFLEELLRSDAKSPDEGAMPEKQSRVMMMYPEPGVYIVDELGTPEERVASTLICLPDYNPAQSLDEISVTSFRYWKIRDYAHAYRSKVVTPSMVA ENIILGLKDFDGQSPPCPLLISSDVEVTRKQAAASTQRFSEGATTWMNEVRPVKDDAVSVYRLRSCGVIFFGKANMHELGIGTTGNNPTYGRRIMHHHME IFKNVDIIVTPTTGTTAPLIPRGALKYGESDMKTTGFFFTF

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G64440		ATFAAH	fatty acid amide hydrolase (.1...		Lus10020469 [exp]	0	1
					Lus10002921 [exp]	3.5	0.9620
AT2G13620		ATCHX15	CATION/H+ EXCHANGER 15, cation...		Lus10040881 [exp]	4.2	0.9585
AT1G64960		HEB1	hypersensitive to excess boron...		Lus10025197 [exp]	4.5	0.9614
AT2G38750		ANNAT4	annexin 4 (.1)		Lus10039551 [exp]	4.7	0.9654
AT3G29810		COBL2	COBRA-like protein 2 precursor...		Lus10042386 [exp]	5.5	0.9456
AT1G70580		GGT2, AOAT2	GLUTAMATE:GLYOXYLATE AMINOTRAN...		Lus10006203 [exp]	5.9	0.9570
AT5G51780	bHLH	bHLH036	basic helix-loop-helix (bHLH) ...		Lus10027395 [exp]	6.3	0.9570
					Lus10020564 [exp]	9.5	0.9527
AT2G15580			RING/U-box superfamily protein...		Lus10030120 [exp]	12.5	0.9473
AT4G39950		CYP79B2	"cytochrome P450, family 79, s...		Lus10031145 [exp]	12.8	0.9672

Compare expression of checked genes

Lus10020469 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.