Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43820 436 / 3e-150 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G43840 427 / 7e-147 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G05680 389 / 6e-132 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G05675 386 / 1e-130 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 363 / 8e-122 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G31790 363 / 1e-121 UDP-Glycosyltransferase superfamily protein (.1) AT1G24100 335 / 7e-111 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT4G15480 280 / 4e-89 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT2G23260 274 / 3e-87 UGT84B1 UDP-glucosyl transferase 84B1 (.1) AT1G05560 273 / 2e-86 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020556 [exp] 551 / 0 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10009412 [exp] 539 / 0 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10024834 [exp] 529 / 0 AT2G43820 290 / 7e-93 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 475 / 1e-165 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006353 [exp] 404 / 1e-137 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 392 / 5e-133 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10024486 [exp] 390 / 3e-132 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006352 [exp] 389 / 1e-131 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10014148 [exp] 386 / 1e-130 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G140500 [exp] 550 / 0 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G117200 [exp] 480 / 1e-167 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032300 [exp] 434 / 2e-149 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.014G175000 [exp] 427 / 1e-146 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.001G389200 [exp] 417 / 1e-142 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 412 / 9e-141 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 407 / 7e-139 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 407 / 7e-139 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 405 / 4e-138 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.007G140300 [exp] 401 / 2e-136 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10020559 pacid=23172263 polypeptide=Lus10020559 locus=Lus10020559.g ID=Lus10020559.BGIv1.0 annot-version=v1.0 ATGGAAAGAAAATCTAGCGAAGAGTGTCATGTCATCCTCCTCCCATACCCAGGCCAAGGCCACATCAACCCAATGACCGAATTCGCCCGCCGCCTAGTCT CACGTGGCATAAGAGCCACCTTAGTCACCACCGTCTTCATCTCCAACTCCCTCAAGCTCGGCCCCACAATCGGCCACGTACATCATGACGTCATCTCTGA CGGCTTCGACGACAGCGGCCGCTACGGCAAGGGCAGAACCTTGCCGGAGTACCTCGAGAAAGCTAAAGAAGTGGGGTCCAGGTCGCTGTCGGAGCTTATA GAGAAGTACAAATCGGCGCCGTTTGGCCAACCCGTTGACTGCGTGGTGTACGAGCCGTTTCTGCCGTGGGCGCTTGACGTGGCAAAGGAGCACGGGCTCT ACGCGGCGCCGTTTTTCACCCAGCCGTGTGCGGTTGACTATGTTTATTATAATGTCTGGGCCGGGTCCTTGGGTTTGCCCGTGGATGGTTGGCCGGTCGA GATACCCGGGCTGCCGGTGATGGAGGCGGCTGATGCGCCGTCGTTTCTTGTCGATCCGGTGTCGTCTAAGGATTTCCTTGGTTTGTTGGTGAACCAATTT TCTAATGCTGAGAGGGCTGATTGCTTTCTGATCAATACCTTCTATGAGCTCGAGAAAGAGGTTGTGGACACATTCTCAAAGATATGTCCGATTCTTCCGA TCGGTCCAACCATCCCTTCCAACTACCTAACCACCAAACCCTCCATGACTGAGAATGGCAAATATGGCCTTGATCTCTTCGAGCATGACGAGTCCATCCC CATAAAATGGCTCTCCAACAAGCCATTGAGCTCGGTCATCTACGTGGCATTCGGGAGCCGGGCAAGCTTGACTCATACGCAAATGGAAGAACTTGCCTTG GGGCTCAAGCAAACGGCCCACTACTTCTTGTGGGTCGTTAGAGAGACCGAGCAAGCCAAGCTTCCGAAACAATTCCTCAAAAGCTCGGGAAATGACAACA AAGGACTAGTGGTGAAATGGAGCCCTCAGCTGAAGATACTAGCAAACAAGGCGATTGGTTGCTTCCTGACTCACTGTGGGTGGAACTCGACGATTGAAGC GTTAAGTTTGGGAGTTCCCATGGTTGCAATGCCCATATGGAGCGACCAGCCTGCCAACGCATCGTTTGTCGAGAAGGTTTGGAAAGTTGGAGTTCGGGTT AGGGTTTCAGAAAAGAACGGAGTTGTGGGGAGGGATGAAATCGAGAGGTGCATTAGAGAAGTGATGGATGGGACTGGGATGGCGATGAAGAAGAATGCTA CCAAATGGAGGGAGGCCGTTGTGAAAGCTGTCGGGAAAGGCGGGTCTTCGTTTCGAAACATTGATGACTTCGTCGCCAAGATAACTACTCACAAAAAAAC ATTCGAGACAAGGATGCTCATTGGCTAG
AA sequence Show only first row Show all	>Lus10020559 pacid=23172263 polypeptide=Lus10020559 locus=Lus10020559.g ID=Lus10020559.BGIv1.0 annot-version=v1.0 MERKSSEECHVILLPYPGQGHINPMTEFARRLVSRGIRATLVTTVFISNSLKLGPTIGHVHHDVISDGFDDSGRYGKGRTLPEYLEKAKEVGSRSLSELI EKYKSAPFGQPVDCVVYEPFLPWALDVAKEHGLYAAPFFTQPCAVDYVYYNVWAGSLGLPVDGWPVEIPGLPVMEAADAPSFLVDPVSSKDFLGLLVNQF SNAERADCFLINTFYELEKEVVDTFSKICPILPIGPTIPSNYLTTKPSMTENGKYGLDLFEHDESIPIKWLSNKPLSSVIYVAFGSRASLTHTQMEELAL GLKQTAHYFLWVVRETEQAKLPKQFLKSSGNDNKGLVVKWSPQLKILANKAIGCFLTHCGWNSTIEALSLGVPMVAMPIWSDQPANASFVEKVWKVGVRV RVSEKNGVVGRDEIERCIREVMDGTGMAMKKNATKWREAVVKAVGKGGSSFRNIDDFVAKITTHKKTFETRMLIG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43820		SGT1, ATSAGT1, ...	UDP-glucose:salicylic acid glu...		Lus10020559 [exp]	0	1
AT4G39490		CYP96A10	"cytochrome P450, family 96, s...		Lus10022277 [exp]	1.4	0.9552
AT1G33500			unknown protein		Lus10013776 [exp]	4.0	0.8734
AT3G57270		BG1	"beta-1,3-glucanase 1", beta-1...		Lus10007208 [exp]	4.0	0.8968
AT1G30670	bHLH	bHLH052	basic helix-loop-helix (bHLH) ...		Lus10005451 [exp]	5.5	0.9016
AT2G32350			Ubiquitin-like superfamily pro...		Lus10039679 [exp]	8.1	0.8870
AT1G73990		SPPA1, SPPA	signal peptide peptidase (.1)		Lus10013336 [exp]	9.6	0.8989
AT5G33340		CDR1	CONSTITUTIVE DISEASE RESISTANC...		Lus10041151 [exp]	11.0	0.8050
AT1G02205		CER1	ECERIFERUM 1, Fatty acid hydro...		Lus10011472 [exp]	11.5	0.8763
AT3G18010	HD	WOX1	WUSCHEL related homeobox 1 (.1...		Lus10018011 [exp]	11.7	0.8838
AT5G60880		BASL	breaking of asymmetry in the s...		Lus10034654 [exp]	12.5	0.8335

Compare expression of checked genes

Lus10020559 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.