Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36630 567 / 0 Sulfite exporter TauE/SafE family protein (.1) AT2G25737 337 / 1e-111 Sulfite exporter TauE/SafE family protein (.1) AT1G61740 108 / 1e-25 Sulfite exporter TauE/SafE family protein (.1) AT1G11540 97 / 4e-22 Sulfite exporter TauE/SafE family protein (.1) AT4G21250 96 / 4e-21 Sulfite exporter TauE/SafE family protein (.1) AT4G21260 83 / 4e-17 Sulfite exporter TauE/SafE family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10029813 [exp] 780 / 0 AT2G36630 612 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011682 [exp] 338 / 6e-112 AT2G25737 632 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10014316 [exp] 324 / 3e-106 AT2G25737 536 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10026025 [exp] 318 / 1e-103 AT2G25737 533 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011683 [exp] 257 / 7e-81 AT2G25737 444 / 9e-154 Sulfite exporter TauE/SafE family protein (.1) Lus10020068 [exp] 95 / 1e-20 AT1G61740 371 / 2e-125 Sulfite exporter TauE/SafE family protein (.1) Lus10022133 [exp] 77 / 4e-17 AT2G25737 106 / 2e-28 Sulfite exporter TauE/SafE family protein (.1) Lus10022134 [exp] 53 / 7e-08 AT2G25737 168 / 8e-50 Sulfite exporter TauE/SafE family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G117900 [exp] 606 / 0 AT2G36630 578 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.003G053000 [exp] 336 / 4e-111 AT2G25737 501 / 2e-175 Sulfite exporter TauE/SafE family protein (.1) Potri.006G242100 [exp] 332 / 2e-109 AT2G25737 568 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037400 [exp] 329 / 3e-108 AT2G25737 535 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.005G124200 [exp] 326 / 4e-107 AT2G25737 453 / 1e-156 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183300 [exp] 323 / 4e-106 AT2G25737 381 / 2e-128 Sulfite exporter TauE/SafE family protein (.1) Potri.007G026800 [exp] 320 / 4e-105 AT2G25737 434 / 2e-149 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037500 [exp] 315 / 4e-103 AT2G25737 529 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183400 [exp] 311 / 2e-101 AT2G25737 418 / 5e-143 Sulfite exporter TauE/SafE family protein (.1) Potri.001G182700 [exp] 303 / 2e-98 AT2G25737 428 / 6e-147 Sulfite exporter TauE/SafE family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0292 [flax] [poplar] LysE PF01925 [flax] [poplar] TauE Sulfite exporter TauE/SafE
Representative CDS sequence Show only first row Show all	>Lus10020733 pacid=23140916 polypeptide=Lus10020733 locus=Lus10020733.g ID=Lus10020733.BGIv1.0 annot-version=v1.0 ATGGCGGCCACCAGAGGTTTAGTGTTATACCTGTTAACAGGATTCACTCTGGCTGTAATATCCGCTTTTTACCTTAACTCCTCTCAAGCTTCCGGTCTTT TGAACTCTGTAGTTCTACCCAGCAGCTCTGACAGAGTTTGGCCGAGATTGGAGTTCAACTGGAGGATAGTGTTGGCGACGGTGATAGCACTTCTGGGATC TGCTTGTGGTACGGTCGGCGGAGTTGGAGGAGGAGGCATTTTCGTTCCTATGCTCACTTTGATTGTTGGTTTCGACACAAAGTCTGCAGCTGCTATTTCC AAATGTATGATCATGGGGGCATCAGCATCTTCCGTGTGGTATAATCTGCAAGTTCCCCATCCAACAAAGGAAGTACCAATCTTGGACTATGACTTGGCTC TTCTGTTCCAGCCGATGCTAATGCTCGGCATCACCGTTGGTGTTTCTTTGAGCGTGGTGTTTCCGTACTGGCTTATAACTGTTCTAATTATCATACTATT CATTGGTACCTCTTCAAGATCTTTCTACAAGGGGATCTTAATGTGGAAGGAAGAAACTCTGTTCAAGAAAGAAATAGCCGAAAGAAACTCTCATGAAGAT GCACGAGTGAATTCCCGCGGAGAACTTCTGATTGATACGTACGAGCCATTGATTCCCAAAGAGAAGAAATCAAAATGGGAAGTATTCTGCTTCAACCTCA GCTGGAAGAGGCAGCTTGTTCTGTTTATAGTCTGGATTTGTTTCCTGATGCTCCAAATTGTCAAGAACGATTTAACAGTTTGTGGAACGGCATACTGGGC ACTATTCTGCCTGCAGTTTCCTGTGGCACTTGGAGTGTTTGGCTATGAAGCAGTCAAGTTATACAAAGAATCCAAGGAAAGGATGAGCGTGGGGAACACA GAATGCATTTGTGAAGCGTCCATTGCATGGACACCATTGAACATTACCTTCTGTGCTCTCTGTGGCATTCTTGGAGGTACCGTTGGTGGTCTATTGGGAT CTGGTGGTGGATTCATTCTTGGCCCTTTGCTGCTTGAGATTGGCGTCATCCCTCAGGTTGCTAGTGCGACAGCAACATTTGTGATGATGTTCTCTTCATC CTTGTCTGTTGTGGAGTTTTACTTGCTCCACAGATTCCCCATACCTTATGCCGCCTACTTGATGGGAGTGTCCATTTTGGCTGGCTTCTGGGGTCAGTAC TTTGTGAGAAAGATCGTTGCTTTTCTCGGAAGGGCTTCGCTTATCGTCTTCATTCTCTCTGGTGTCATCTTTGCTAGTGCTCTCACAATGGGGGTTATTG GTATTGAGAAGAGCATAGCAATGATACACAACCATGAATTCATGGGGTTCCTGGGTTTCTGCAGCAGCCAATGA
AA sequence Show only first row Show all	>Lus10020733 pacid=23140916 polypeptide=Lus10020733 locus=Lus10020733.g ID=Lus10020733.BGIv1.0 annot-version=v1.0 MAATRGLVLYLLTGFTLAVISAFYLNSSQASGLLNSVVLPSSSDRVWPRLEFNWRIVLATVIALLGSACGTVGGVGGGGIFVPMLTLIVGFDTKSAAAIS KCMIMGASASSVWYNLQVPHPTKEVPILDYDLALLFQPMLMLGITVGVSLSVVFPYWLITVLIIILFIGTSSRSFYKGILMWKEETLFKKEIAERNSHED ARVNSRGELLIDTYEPLIPKEKKSKWEVFCFNLSWKRQLVLFIVWICFLMLQIVKNDLTVCGTAYWALFCLQFPVALGVFGYEAVKLYKESKERMSVGNT ECICEASIAWTPLNITFCALCGILGGTVGGLLGSGGGFILGPLLLEIGVIPQVASATATFVMMFSSSLSVVEFYLLHRFPIPYAAYLMGVSILAGFWGQY FVRKIVAFLGRASLIVFILSGVIFASALTMGVIGIEKSIAMIHNHEFMGFLGFCSSQ

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36630			Sulfite exporter TauE/SafE fam...		Lus10020733 [exp]	0	1
AT4G21380		ARK3	receptor kinase 3 (.1)		Lus10028782 [exp]	6.2	0.9179
AT4G37870		PCK1, PEPCK	phosphoenolpyruvate carboxykin...		Lus10042934 [exp]	7.5	0.9186
AT2G24100		ASG1	ALTERED SEED GERMINATION 1, un...		Lus10041622 [exp]	13.3	0.8966
AT2G18700		ATTPSB, ATTPS11	TREHALOSE-6-PHOSPHATE SYNTHASE...		Lus10015509 [exp]	21.0	0.8984
AT2G14170		ALDH6B2	aldehyde dehydrogenase 6B2 (....		Lus10007084 [exp]	22.2	0.9020
AT4G34030		MCCB	3-methylcrotonyl-CoA carboxyla...		Lus10014068 [exp]	23.2	0.9137
AT2G24100		ASG1	ALTERED SEED GERMINATION 1, un...		Lus10024097 [exp]	28.3	0.8889
AT1G57610			Protein of unknown function (D...		Lus10034435 [exp]	30.0	0.8975
AT3G54110		ATUCP1, UCP1, U...	ARABIDOPSIS THALIANA UNCOUPLIN...		Lus10027755 [exp]	30.6	0.8909
AT2G32190			unknown protein		Lus10039015 [exp]	31.9	0.8964

Compare expression of checked genes

Lus10020733 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.