Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G65820 171 / 1e-55 microsomal glutathione s-transferase, putative (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007373 [exp] 238 / 6e-82 AT1G65820 207 / 5e-70 microsomal glutathione s-transferase, putative (.1.2.3) Lus10020793 [exp] 202 / 2e-67 AT1G65820 218 / 3e-74 microsomal glutathione s-transferase, putative (.1.2.3) Lus10007375 [exp] 195 / 1e-64 AT1G65820 222 / 7e-76 microsomal glutathione s-transferase, putative (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G140900 [exp] 189 / 3e-62 AT1G65820 217 / 1e-73 microsomal glutathione s-transferase, putative (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01124 [flax] [poplar] MAPEG MAPEG family
Representative CDS sequence Show only first row Show all	>Lus10020792 pacid=23140908 polypeptide=Lus10020792 locus=Lus10020792.g ID=Lus10020792.BGIv1.0 annot-version=v1.0 ATGAATCCTAAGAAAGACGCAGAAAGTAAAATCAAGGATGCCCGCCGGCGCCGGAGTTACGGAATTGCTGCCCAAGGAGTACGGCTACGTGGCTCTAGTG GTAGTAGCCTGTTTCTCACTGAGTTTTACATGGCACGCAAGGTCGTCAGGGCTCGCATGAAATACAACGTCCCTTATCCCACCCTATACGCAATTGAATC AGAGAACAAACACACTAATCTCTTCAACTGTGTTCAGAGAGGGCATCAGAATTTGCTGGAATTGATTCCGATGTTCTTCATGCTAATCGCATTGGGAGGA TTGAGGCATCCCTGCGTCGCTGCCGCTCTCGGAGCTTTCTTCGTCGTCACTCGCTACTTCTATTTTACCGGCTACTCCACCGGCGATCCCAAGAATCGCC TCCCCGTCGGTAAATACGGGCTATTGTCTCTCCTTGGGCTAATGGGTTGCACAATTTCCCTTGGCATCACCCTCCTACGAGCATAG
AA sequence Show only first row Show all	>Lus10020792 pacid=23140908 polypeptide=Lus10020792 locus=Lus10020792.g ID=Lus10020792.BGIv1.0 annot-version=v1.0 MNPKKDAESKIKDARRRRSYGIAAQGVRLRGSSGSSLFLTEFYMARKVVRARMKYNVPYPTLYAIESENKHTNLFNCVQRGHQNLLELIPMFFMLIALGG LRHPCVAAALGAFFVVTRYFYFTGYSTGDPKNRLPVGKYGLLSLLGLMGCTISLGITLLRA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G65820			microsomal glutathione s-trans...		Lus10020792 [exp]	0	1
AT1G07520	GRAS		GRAS family transcription fact...		Lus10037757 [exp]	1.4	0.9664
AT3G07990		SCPL27	serine carboxypeptidase-like 2...		Lus10036516 [exp]	1.4	0.9812
AT4G31180			Class II aminoacyl-tRNA and bi...		Lus10028557 [exp]	4.6	0.9475
AT5G51740			Peptidase family M48 family pr...		Lus10031682 [exp]	5.3	0.9461
AT4G20990		ATACA4, ACA4	A. THALIANA ALPHA CARBONIC ANH...		Lus10031027 [exp]	5.5	0.9451
AT2G34790		MEE23, EDA28	MATERNAL EFFECT EMBRYO ARREST ...		Lus10023363 [exp]	5.7	0.8657
AT4G39950		CYP79B2	"cytochrome P450, family 79, s...		Lus10031726 [exp]	5.7	0.9187
AT4G15620			Uncharacterised protein family...		Lus10035168 [exp]	5.8	0.8582
					Lus10022950 [exp]	6.5	0.8340
AT1G75290			NAD(P)-binding Rossmann-fold s...		Lus10021709 [exp]	6.6	0.8965

Compare expression of checked genes

Lus10020792 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.