Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G44420 361 / 2e-124 protein N-terminal asparagine amidohydrolase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033495 [exp] 659 / 0 AT2G44420 365 / 9e-126 protein N-terminal asparagine amidohydrolase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G023200 [exp] 418 / 2e-146 AT2G44420 412 / 3e-144 protein N-terminal asparagine amidohydrolase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10020880 pacid=23177902 polypeptide=Lus10020880 locus=Lus10020880.g ID=Lus10020880.BGIv1.0 annot-version=v1.0 ATGCCACCAAAAGAAAGTGGATCACTAATATCTTACCTCAATCCCGATCGCGGAAATGTGAATAACGAAAGTGTTCATGTACACCAGGAAAGGGATGCTC TGTTGCTGGAACTGATCAGACATCCCATGGTGGTTGAAGCGTCAAACGCGTTCAAGTGTTTACCAGAGAGGAAATTCTCGACTGAGGAGGATCCTGGATT ACAGAATTGCAAATTTGTTTATCTGTTCCAAAGAGAACACGCTGCCGTTGACCCTACCCTTGTGGATTTCATTGGCACTGACGAAGCAACGACTTGTGTA GGTCTTGTCATCCAAAACCGGAAAAACAGAATGATATCGGTTTCTCATATGGATTCTCCAACTGTTGTATCTATTGGCCTTGAACAGATGTTGTCACAAC TTTCCGGCGACAGTTCTGATGCTGATTTTGATGTTCATGTAGTTGGTGGTTTTGAAGATGTTAAACCCAATTATGCTAGCAGCTCCTCCGTGTCTAAAAG ACCATCAAAATTGGATGGTTTTTCTCTCCCCCTGTGTACCAAAGTAATCAAAGCGTTGGGTCGTAGGCAGGAGAAGTTTCATATCAGAACTCTCTTTGTT CTTGAGCATAACACAAAGAGGGATTCACAAGGAATTGCATATCCAATCTTTAACGGAGTCCTGGTTGAAACGTCCACCGGGTCTGTTTTCCCAGCAAGTT TCGATAGAACTACAAGATGCCCAGATGAGATAGTAAGGAGAATTCGTGTGTCAGCATCATACGAGGATCCAACATGGGACGGCAAGTTGCTGGACACATA CGACACTCGAACTGATAAGTTTGTAATTGCATCCTGCACTTGGACCAGTAACCAATTAATCGATGCTTTGGCACTGCAAGAACTTTCCGATGCAGAGATC CTTCTTCAGTGTTCTACTTCACCTTCTGCAGAAGGCCCTGATTTTGTTACTAATATGAAAAGGCAGTGTGAGTATCTATTCAGACAACCAAAGTGGGAAG ACACATTCCCAATGAAGGAAGCCAGAGTATTTGTTAGGAGTGACGAGGGAAGCTGGGATATGATTCCGCTGTCAAAGAAGGCTCCATAA
AA sequence Show only first row Show all	>Lus10020880 pacid=23177902 polypeptide=Lus10020880 locus=Lus10020880.g ID=Lus10020880.BGIv1.0 annot-version=v1.0 MPPKESGSLISYLNPDRGNVNNESVHVHQERDALLLELIRHPMVVEASNAFKCLPERKFSTEEDPGLQNCKFVYLFQREHAAVDPTLVDFIGTDEATTCV GLVIQNRKNRMISVSHMDSPTVVSIGLEQMLSQLSGDSSDADFDVHVVGGFEDVKPNYASSSSVSKRPSKLDGFSLPLCTKVIKALGRRQEKFHIRTLFV LEHNTKRDSQGIAYPIFNGVLVETSTGSVFPASFDRTTRCPDEIVRRIRVSASYEDPTWDGKLLDTYDTRTDKFVIASCTWTSNQLIDALALQELSDAEI LLQCSTSPSAEGPDFVTNMKRQCEYLFRQPKWEDTFPMKEARVFVRSDEGSWDMIPLSKKAP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G44420			protein N-terminal asparagine ...		Lus10020880 [exp]	0	1
AT5G07910			Leucine-rich repeat (LRR) fami...		Lus10000681 [exp]	1.0	0.9708
AT3G04970			DHHC-type zinc finger family p...		Lus10033823 [exp]	2.0	0.9645
AT2G32080		PUR ALPHA-1, PU...	purin-rich alpha 1 (.1.2)		Lus10020245 [exp]	2.8	0.9626
AT5G27450		MVK, MK	mevalonate kinase (.1.2.3)		Lus10015168 [exp]	3.3	0.9547
AT2G01220			Nucleotidylyl transferase supe...		Lus10032989 [exp]	3.5	0.9577
AT4G32180		ATPANK2	pantothenate kinase 2 (.1.2.3)		Lus10013019 [exp]	4.5	0.9624
AT1G04970			lipid-binding serum glycoprote...		Lus10014625 [exp]	4.6	0.9645
AT2G20120		COV1	CONTINUOUS VASCULAR RING, Prot...		Lus10043220 [exp]	4.9	0.9544
AT3G07440			unknown protein		Lus10020404 [exp]	5.7	0.9521
AT5G59210			myosin heavy chain-related (.1...		Lus10016491 [exp]	6.3	0.9482

Compare expression of checked genes

Lus10020880 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.