Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G57950 108 / 9e-30 unknown protein AT5G06790 97 / 6e-25 unknown protein AT2G42180 88 / 4e-22 unknown protein AT5G47920 39 / 0.001 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023815 [exp] 241 / 3e-82 AT5G06790 66 / 8e-14 unknown protein Lus10000281 [exp] 44 / 3e-05 AT5G47920 76 / 5e-17 unknown protein Lus10002566 [exp] 43 / 5e-05 AT5G47920 79 / 3e-18 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G191100 [exp] 152 / 1e-46 AT5G06790 141 / 4e-42 unknown protein Potri.016G047800 [exp] 150 / 7e-46 AT5G06790 137 / 1e-40 unknown protein Potri.014G140000 [exp] 39 / 0.0008 AT5G47920 114 / 1e-31 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021036 pacid=23182318 polypeptide=Lus10021036 locus=Lus10021036.g ID=Lus10021036.BGIv1.0 annot-version=v1.0 ATGGCATATCTCAGAACACTCCAACCTCCTCTCCAACTCTTCTCAACAAAGCCATCCCACCACCACTCCCTAACCACAACCACAACCACAATGAAGAAGG GCATCAAAGCCCTAGTCCACACCTTGATCGTGGCGCACCTCTGCCGCGCATTTCGAGCCCTCCGACGTGTGAAATCCATCCTCCTCCAAGCCATCAAGGA CCACAACTTCCCCTTCTCACACTACCTCATCATCTACCCTTCATCCAAGTCCAAGAAAATCCATACCAAGAATAAGGTCTTCTTCGGCTCCTTCCGGCTC CACTACAACTGGGGCTCCACGTCATCCTCCCACGTCACGCCTGTTCCCGAGTCCGTCCTATGTGGCGGCTTCAATGACGTGGTGGAGGGTCTTCCCGGGT ACCTCCTCTGGCTAGAGGAGAAAGACCGCGAGAAGACTTATAAGGTGAGTGGGGCCGGTGAGGATGATGTGGCGAATGAGATTGACAGGCTGGCGGAGAT GTTCATCGCCGACTGCCACGAGAAGTTCCAGCTGGAGAAGCAGGAGTCCATGAGGAGGTTCCAGGAAATGATGGCTAGAAGCATGTGA
AA sequence Show only first row Show all	>Lus10021036 pacid=23182318 polypeptide=Lus10021036 locus=Lus10021036.g ID=Lus10021036.BGIv1.0 annot-version=v1.0 MAYLRTLQPPLQLFSTKPSHHHSLTTTTTTMKKGIKALVHTLIVAHLCRAFRALRRVKSILLQAIKDHNFPFSHYLIIYPSSKSKKIHTKNKVFFGSFRL HYNWGSTSSSHVTPVPESVLCGGFNDVVEGLPGYLLWLEEKDREKTYKVSGAGEDDVANEIDRLAEMFIADCHEKFQLEKQESMRRFQEMMARSM

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G57950			unknown protein		Lus10021036 [exp]	0	1
AT1G69530		ATHEXPALPHA1.2,...	EXPANSIN 1, expansin A1 (.1.2....		Lus10019088 [exp]	2.2	0.8755
AT2G03090		ATHEXPALPHA1.3,...	EXPANSIN 15, expansin A15 (.1)		Lus10034465 [exp]	11.0	0.8481
AT1G16900			Alg9-like mannosyltransferase ...		Lus10028153 [exp]	16.6	0.8554
AT4G26690		GDPDL3, GPDL2, ...	SHAVEN 3, MUTANT ROOT HAIR 5, ...		Lus10032576 [exp]	21.8	0.8689
AT1G80620			S15/NS1, RNA-binding protein (...		Lus10009249 [exp]	31.0	0.8632
AT2G18290		EMB2783, APC10	EMBRYO DEFECTIVE 2783, anaphas...		Lus10028308 [exp]	31.9	0.8006
AT1G54510		ATNEK1	NIMA-related serine/threonine ...		Lus10009186 [exp]	40.5	0.8613
AT2G14530		TBL13	TRICHOME BIREFRINGENCE-LIKE 13...		Lus10012477 [exp]	49.2	0.8598
AT2G34060			Peroxidase superfamily protein...		Lus10005278 [exp]	52.4	0.8541
AT2G41310		ARR8, ATRR3	RESPONSE REGULATOR 8, response...		Lus10007885 [exp]	66.1	0.8459

Compare expression of checked genes

Lus10021036 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.