Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G05990 491 / 4e-174 ENR1, MOD1 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004186 [exp] 667 / 0 AT2G05990 554 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Lus10016274 [exp] 567 / 0 AT2G05990 545 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Lus10012019 [exp] 550 / 0 AT2G05990 534 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Lus10018323 [exp] 48 / 8e-06 AT3G12800 395 / 4e-139 short-chain dehydrogenase-reductase B (.1) Lus10017129 [exp] 46 / 2e-05 AT3G12800 391 / 7e-138 short-chain dehydrogenase-reductase B (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G046701 [exp] 573 / 0 AT2G05990 526 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Potri.001G013500 [exp] 538 / 0 AT2G05990 553 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Potri.T014016 [exp] 528 / 0 AT2G05990 549 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Potri.003G212700 [exp] 526 / 0 AT2G05990 546 / 0.0 MOSAIC DEATH 1, ENOYL-ACP REDUCTASE 1, NAD(P)-binding Rossmann-fold superfamily protein (.1), NAD(P)-binding Rossmann-fold superfamily protein (.2) Potri.012G125900 [exp] 44 / 0.0001 AT3G12800 421 / 9e-150 short-chain dehydrogenase-reductase B (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021040 pacid=23182317 polypeptide=Lus10021040 locus=Lus10021040.g ID=Lus10021040.BGIv1.0 annot-version=v1.0 ATGGCTGCAGCTGCAACTCCTACTACAAGTGTGGCAACAGCCAAGGCATGTATCTCATCGCCCCGTAAAGTATTCATGCAAAGGACTGCAAGTTTCAGTA CCGGATCCAAAGATGCGTCTATGACCAGGCTTACTAGTTTGAACCACGTCTCCTTGAGCCAGGCCTTCTTTCAGAAGAAGCGCAATTCGGTGTCCCGGGT CGTGACAACAAGAGCAATGTCCACTGGAAGCGAGACTAGCCCCTTGCCAGGACTGCCTGTCGATTTACGAGGTAAGAGAGCTTTCATTGCTGGTATAGCT GATGACAACGGGTACGGTTGGGCTATAGCAAAATCACTTGCTGCAGCTGGTGCTGAAATTCTTGTTGGAACATGGGTGCCTGCATTGAACATATTCGAAA GCAGTCTGCGACGTGGAAAGTTTGACGAATCGCGTGTATTGCCAGATGGTTCTCTAATGGAAATTGCTAAAGTGTATCCAATGGATGCGGTTTTCGATGG CCCAGAGGATGTTCCTGAAGATATAAAAACAAACAAGCGCTATGCAGGATCCACAAACTGGACTGTTAAGGAGCTTGCTGAATCGGTGAAGCAAGACTAC GGCAGCATTGACATCCTAGTCCACTCTCTTGCTAACGGGCCAGAGGTCGTCAAGCCTCTTCTCGAGACCTCAAGATACGGATACCTCGCTGCCATCTCTG CATCAAGCTACTCATTTATTTCCCTTCTTCAGAACTTCATTCCTATAATGAATCCAGGTGGTGCAACAATTTCCTTGACTTACCTTGCTTCTGAAAAGAT CATTCCTGGTTATGGTGGTGGGATGAGTTCAGCAAAGGCTGCTTTGGAGAGCGACACTCGCGTGCTAGCCTTTGAAGCTGGAAGAAAGCACAACATCAGA GTGAACACAATATCTGCAGGTCCATTGAGAAGTAGGGCAGCAAAGGCAATCGGTTTCATCGACATGATGATCGACTACTCATCAGCCAATGCACCCCTTC AGAAAGAGCTAGCTGCAGAGGAGGTAGGGAACGCCGCTGCATTCCTGGCTTCACCTTTGGCTTCGGCCATCACGGGGACTGTCCTGTATGTAGACAATGG TCTAAACGCAATGGGAGTAGGAGTCGACAGCCCCATTTTCGAGAACCTCAACATTCCAAAAGCTGCCTAA
AA sequence Show only first row Show all	>Lus10021040 pacid=23182317 polypeptide=Lus10021040 locus=Lus10021040.g ID=Lus10021040.BGIv1.0 annot-version=v1.0 MAAAATPTTSVATAKACISSPRKVFMQRTASFSTGSKDASMTRLTSLNHVSLSQAFFQKKRNSVSRVVTTRAMSTGSETSPLPGLPVDLRGKRAFIAGIA DDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDESRVLPDGSLMEIAKVYPMDAVFDGPEDVPEDIKTNKRYAGSTNWTVKELAESVKQDY GSIDILVHSLANGPEVVKPLLETSRYGYLAAISASSYSFISLLQNFIPIMNPGGATISLTYLASEKIIPGYGGGMSSAKAALESDTRVLAFEAGRKHNIR VNTISAGPLRSRAAKAIGFIDMMIDYSSANAPLQKELAAEEVGNAAAFLASPLASAITGTVLYVDNGLNAMGVGVDSPIFENLNIPKAA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G05990		ENR1, MOD1	MOSAIC DEATH 1, ENOYL-ACP REDU...		Lus10021040 [exp]	0	1
AT2G38040		CAC3	acetyl Co-enzyme a carboxylase...		Lus10021126 [exp]	1.4	0.9512
AT5G35360		CAC2	acetyl Co-enzyme a carboxylase...		Lus10042899 [exp]	1.7	0.9527
AT2G05990		ENR1, MOD1	MOSAIC DEATH 1, ENOYL-ACP REDU...		Lus10004186 [exp]	2.4	0.9291
AT3G66658		ALDH22A1	aldehyde dehydrogenase 22A1 (....		Lus10037763 [exp]	3.0	0.9380
AT1G78900		VHA-A	vacuolar ATP synthase subunit ...		Lus10034836 [exp]	6.3	0.9353
AT1G34430		EMB3003	embryo defective 3003, 2-oxoac...		Lus10009432 [exp]	7.6	0.9020
AT5G35360		CAC2	acetyl Co-enzyme a carboxylase...		Lus10017534 [exp]	8.4	0.9322
AT5G02970			alpha/beta-Hydrolases superfam...		Lus10026484 [exp]	10.5	0.9061
AT3G10050		OMR1	L-O-methylthreonine resistant ...		Lus10023884 [exp]	10.8	0.8760
AT5G19050			alpha/beta-Hydrolases superfam...		Lus10034026 [exp]	12.5	0.8923

Compare expression of checked genes

Lus10021040 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.