Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017211 [exp] 214 / 1e-72 AT3G09280 69 / 6e-16 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G092200 [exp] 75 / 2e-17 AT3G09280 40 / 7e-05 unknown protein Potri.016G103700 [exp] 64 / 3e-13 ND /
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021099 pacid=23182357 polypeptide=Lus10021099 locus=Lus10021099.g ID=Lus10021099.BGIv1.0 annot-version=v1.0 ATGGCTCCATCATTTCTTATTTGCTTCCTCCTTGTGGAAACACTGGTGGGTCTAGCATTGGCTAGTGAAAAGGTTCAAACTTTGGTCCAACCCAACTCAG ATTTACTCTCAGAAACAAAAACCTCTGGTTTCAAACTCAGTAGAAAGCTTGGGAACCATAACTTACAGTCATTGGTTGCTCCTCCAATTCGTGGTCTTTC GATAGCGCCTAGTTCTGAACAAGAACATGAAGGAATGCATGCTGGAGATGAAAATGCTTCCTCTCATCAGGTGGACATTGCTCCAGGGCAGCAGGAGAAA GTTCATCAGGAGCATCACCGGCACCATTCGGTGGATAAATCGGTGGCCGGCGGCGGAGTGATACTTGGAGGACTGGCCACAACCTTTTTGGTGGCGATCT TCTGTTACATTAGAGCTACTGGGAGGGATAAATTACCAGACACTACTACTATCAGCAAAGTTTGA
AA sequence Show only first row Show all	>Lus10021099 pacid=23182357 polypeptide=Lus10021099 locus=Lus10021099.g ID=Lus10021099.BGIv1.0 annot-version=v1.0 MAPSFLICFLLVETLVGLALASEKVQTLVQPNSDLLSETKTSGFKLSRKLGNHNLQSLVAPPIRGLSIAPSSEQEHEGMHAGDENASSHQVDIAPGQQEK VHQEHHRHHSVDKSVAGGGVILGGLATTFLVAIFCYIRATGRDKLPDTTTISKV

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G09280			unknown protein		Lus10021099 [exp]	0	1
AT1G01470		LSR3, LEA14	LIGHT STRESS-REGULATED 3, LATE...		Lus10010139 [exp]	8.9	0.8835
AT3G19200			unknown protein		Lus10019867 [exp]	10.4	0.8890
AT3G02230		ATRGP1, RGP1	ARABIDOPSIS THALIANA REVERSIBL...		Lus10022443 [exp]	15.1	0.8586
AT2G17080			Arabidopsis protein of unknown...		Lus10023957 [exp]	17.9	0.8482
AT3G07870			F-box and associated interacti...		Lus10012358 [exp]	22.4	0.7860
AT2G47270	bHLH	bHLH151, UPB1	UPBEAT1, sequence-specific DNA...		Lus10001447 [exp]	28.2	0.8462
AT3G14520		AtTPS18	Terpenoid cyclases/Protein pre...		Lus10002660 [exp]	30.7	0.8342
AT1G64480		CBL8	calcineurin B-like protein 8 (...		Lus10003191 [exp]	34.4	0.8265
AT2G27920		SCPL51	serine carboxypeptidase-like 5...		Lus10035555 [exp]	37.9	0.8037
					Lus10022643 [exp]	39.2	0.8074

Compare expression of checked genes

Lus10021099 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.