Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G09270 244 / 4e-82 ATGSTU8 glutathione S-transferase TAU 8 (.1) AT2G29420 216 / 6e-71 GST25, ATGSTU7 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) AT2G29490 201 / 4e-65 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29450 193 / 4e-62 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT2G29480 190 / 9e-61 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT2G29460 186 / 3e-59 GST22, ATGSTU4 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) AT2G29470 184 / 2e-58 GST21, ATGSTU3 GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 (.1) AT2G29440 179 / 3e-56 GST24, ATGSTU6 GLUTATHIONE S-TRANSFERASE 24, glutathione S-transferase tau 6 (.1) AT1G59700 177 / 1e-55 ATGSTU16 glutathione S-transferase TAU 16 (.1) AT1G17190 174 / 2e-54 ATGSTU26 glutathione S-transferase tau 26 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021103 [exp] 360 / 6e-128 AT3G09270 250 / 1e-84 glutathione S-transferase TAU 8 (.1) Lus10017208 [exp] 270 / 2e-92 AT3G09270 212 / 3e-69 glutathione S-transferase TAU 8 (.1) Lus10040727 [exp] 231 / 9e-77 AT2G29420 216 / 6e-71 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016467 [exp] 231 / 9e-77 AT2G29420 207 / 2e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016471 [exp] 228 / 2e-75 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10017209 [exp] 221 / 4e-73 AT3G09270 93 / 5e-23 glutathione S-transferase TAU 8 (.1) Lus10016469 [exp] 221 / 1e-72 AT2G29420 230 / 2e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040761 [exp] 220 / 2e-72 AT2G29420 233 / 1e-77 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040764 [exp] 213 / 1e-69 AT2G29420 229 / 6e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G070900 [exp] 226 / 4e-75 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G104500 [exp] 209 / 2e-69 AT3G09270 196 / 2e-64 glutathione S-transferase TAU 8 (.1) Potri.010G061200 [exp] 209 / 1e-68 AT3G09270 202 / 8e-66 glutathione S-transferase TAU 8 (.1) Potri.012G052200 [exp] 208 / 7e-68 AT2G29420 220 / 2e-72 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G023200 [exp] 202 / 2e-65 AT3G09270 189 / 1e-60 glutathione S-transferase TAU 8 (.1) Potri.016G023340 [exp] 200 / 1e-64 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G035500 [exp] 200 / 1e-64 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G032800 [exp] 199 / 2e-64 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G061301 [exp] 197 / 9e-64 AT2G29420 202 / 9e-66 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.015G042000 [exp] 196 / 4e-63 AT2G29460 197 / 7e-64 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [flax] [poplar] Thioredoxin PF02798 [flax] [poplar] GST_N Glutathione S-transferase, N-terminal domain CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10021102 pacid=23182328 polypeptide=Lus10021102 locus=Lus10021102.g ID=Lus10021102.BGIv1.0 annot-version=v1.0 ATGGAGGGATCAGTGGTGAAGCTGTTAGGATTCTGGGCAAGCCCGTTCAGCAATCGGGTGGAGCTTGCTCTGAAATTGAAAGGGGTTGATTACGAATACG TTGAGCAAGATTTGGCCAACAAGAGTCCTCTGCTTCTCCAGCTGAATCCTGTTCACAAGAAGATTCCTGTCCTCGTTCACAACGGCAAACCAGTTGCTGA ATCTCTGGTTATACTGGAATACATCGACGAGACGTGGCCGAATGATTATCCGATCTTGCCTCGTGATCCGCACGAGAAGGCCGTTGCCCGGTTCTGGGCT AAGTTCGTCGACGAGAAGTGCATGGAGGGGGTCTGGAAGATCATGTGGTGCAAAGAGGAAGCAGAAAGGAAGAAGCTGACAGAGGAAGCATGGCAGCACC TGAAAACACTCGAAGATCAGCTCAAGGAGGGGAAGAGATTCTTCGGTGGAGAAGGAATTGGGATGGTGGACATAGCAGCCAACTTCTTTGGGTTCTGGAT TGGAGTGATACAGAAAGTTACTGGAATGGAGGAGCTGCTAATTACAGAGGACAAGTTTCCAGTGCTCTGCAACTGGATTGATGAGTTCGTCGAGCATAGT GCGGTGAAGGAGACTCTTCCTCCGAAGGACAAGCTCTTCGTCGCCTTCAAAGCTCGCCTTGGCGCCCTAGCTTGGAAGTACTGA
AA sequence Show only first row Show all	>Lus10021102 pacid=23182328 polypeptide=Lus10021102 locus=Lus10021102.g ID=Lus10021102.BGIv1.0 annot-version=v1.0 MEGSVVKLLGFWASPFSNRVELALKLKGVDYEYVEQDLANKSPLLLQLNPVHKKIPVLVHNGKPVAESLVILEYIDETWPNDYPILPRDPHEKAVARFWA KFVDEKCMEGVWKIMWCKEEAERKKLTEEAWQHLKTLEDQLKEGKRFFGGEGIGMVDIAANFFGFWIGVIQKVTGMEELLITEDKFPVLCNWIDEFVEHS AVKETLPPKDKLFVAFKARLGALAWKY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10021102 [exp]	0	1
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016469 [exp]	1.0	0.9836
AT3G29635			HXXXD-type acyl-transferase fa...		Lus10005362 [exp]	1.4	0.9728
AT5G57620	MYB	ATMYB36	myb domain protein 36 (.1)		Lus10013830 [exp]	3.2	0.9669
AT4G21380		ARK3	receptor kinase 3 (.1)		Lus10033743 [exp]	3.5	0.9707
AT4G13180			NAD(P)-binding Rossmann-fold s...		Lus10010673 [exp]	4.6	0.9650
AT4G27290			S-locus lectin protein kinase ...		Lus10014811 [exp]	4.9	0.9654
AT2G30140			UDP-Glycosyltransferase superf...		Lus10042261 [exp]	4.9	0.9704
AT3G02100			UDP-Glycosyltransferase superf...		Lus10003455 [exp]	6.7	0.9520
AT5G17000			Zinc-binding dehydrogenase fam...		Lus10004379 [exp]	6.9	0.9631
AT3G22600			Bifunctional inhibitor/lipid-t...		Lus10039348 [exp]	6.9	0.9568

Compare expression of checked genes

Lus10021102 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.