Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G09270 249 / 3e-84 ATGSTU8 glutathione S-transferase TAU 8 (.1) AT2G29420 219 / 2e-72 GST25, ATGSTU7 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) AT2G29490 199 / 3e-64 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29480 190 / 7e-61 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT2G29450 190 / 9e-61 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT2G29460 182 / 7e-58 GST22, ATGSTU4 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) AT2G29470 182 / 9e-58 GST21, ATGSTU3 GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 (.1) AT2G29440 176 / 2e-55 GST24, ATGSTU6 GLUTATHIONE S-TRANSFERASE 24, glutathione S-transferase tau 6 (.1) AT1G78320 175 / 4e-55 ATGSTU23 glutathione S-transferase TAU 23 (.1) AT1G74590 172 / 8e-54 ATGSTU10 glutathione S-transferase TAU 10 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021102 [exp] 360 / 5e-128 AT3G09270 245 / 2e-82 glutathione S-transferase TAU 8 (.1) Lus10017208 [exp] 266 / 1e-90 AT3G09270 212 / 3e-69 glutathione S-transferase TAU 8 (.1) Lus10040727 [exp] 233 / 3e-77 AT2G29420 216 / 6e-71 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040761 [exp] 229 / 3e-76 AT2G29420 233 / 1e-77 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016471 [exp] 228 / 1e-75 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016469 [exp] 224 / 3e-74 AT2G29420 230 / 2e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016467 [exp] 215 / 1e-70 AT2G29420 207 / 2e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040764 [exp] 212 / 2e-69 AT2G29420 229 / 6e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10035241 [exp] 201 / 4e-65 AT2G29420 188 / 5e-60 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G070900 [exp] 214 / 2e-70 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.012G052200 [exp] 208 / 6e-68 AT2G29420 220 / 2e-72 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061200 [exp] 206 / 2e-67 AT3G09270 202 / 8e-66 glutathione S-transferase TAU 8 (.1) Potri.016G104500 [exp] 203 / 4e-67 AT3G09270 196 / 2e-64 glutathione S-transferase TAU 8 (.1) Potri.008G175100 [exp] 197 / 8e-64 AT2G29420 169 / 1e-52 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G023200 [exp] 197 / 2e-63 AT3G09270 189 / 1e-60 glutathione S-transferase TAU 8 (.1) Potri.016G023340 [exp] 194 / 2e-62 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.002G254000 [exp] 193 / 8e-62 AT2G29420 167 / 1e-51 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061301 [exp] 191 / 2e-61 AT2G29420 202 / 9e-66 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.015G042000 [exp] 189 / 1e-60 AT2G29460 197 / 7e-64 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [flax] [poplar] Thioredoxin PF02798 [flax] [poplar] GST_N Glutathione S-transferase, N-terminal domain CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10021103 pacid=23182446 polypeptide=Lus10021103 locus=Lus10021103.g ID=Lus10021103.BGIv1.0 annot-version=v1.0 ATGGAGGGATCAGTGGTGAAGCTGTTAGGAGTCTGGGGGAGCCCAATGAGCAAGAGGGTGGAGCTAGCTCTGAAACTGAAAGGAGTTTATTACCAATACA TCGAGCAAGATTTAGCCGACAAAAGTCCTCTGCTTCTCCAGCTGAATCCTGTTCACAAGAAGATTCCTGTGCTCGTCCACAACGGCAGACCAGTTGCTGA ATCTCTGATTATCGTTGAATACATCGACGAGACGTGGCCGAATGATTATCCGATCTTGCCCCGAGATCCGTACGAGAAGGCCGCCGCCCGGTTTTGGGCC AAGTTCATCGACGACAAGTGTTTGCAAGGAGCGTGGAAGATCCTGTGGTGCGCAGAGGAGGATAGAGGGAAGATGACGGAGGAAGTGTCGCGGCAGCTTA AAGCACTTGAAGATCAGCTCAAGGACAATAGATTCTTCGGAGGGGAAAGGATCGGGATGGTGGACATTGCTGCAATCTTCTTCGGATTTTGGCTTGGACT GATTCAGGAAGTCACAGGGATGGAGCTAGTTACAGGGGACAAGTTCCCGGTGCTGTGCAATTGGATCGACGAGTTCGTTGCGCATAGCGCGGTGAAGGAG ATTCTTCCGCCTAGAGACGAGCTCTTAGCCGCGTTCAAAGTTCGCCTTATCGGCGCCGGAGCTTGGAAGTACTGA
AA sequence Show only first row Show all	>Lus10021103 pacid=23182446 polypeptide=Lus10021103 locus=Lus10021103.g ID=Lus10021103.BGIv1.0 annot-version=v1.0 MEGSVVKLLGVWGSPMSKRVELALKLKGVYYQYIEQDLADKSPLLLQLNPVHKKIPVLVHNGRPVAESLIIVEYIDETWPNDYPILPRDPYEKAAARFWA KFIDDKCLQGAWKILWCAEEDRGKMTEEVSRQLKALEDQLKDNRFFGGERIGMVDIAAIFFGFWLGLIQEVTGMELVTGDKFPVLCNWIDEFVAHSAVKE ILPPRDELLAAFKVRLIGAGAWKY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10021103 [exp]	0	1
AT2G36780			UDP-Glycosyltransferase superf...		Lus10012148 [exp]	1.4	0.9572
AT2G24280			alpha/beta-Hydrolases superfam...		Lus10017002 [exp]	1.7	0.9490
AT5G19730			Pectin lyase-like superfamily ...		Lus10012942 [exp]	2.2	0.9462
AT4G04720		CPK21	calcium-dependent protein kina...		Lus10002075 [exp]	4.5	0.9483
AT1G51190	AP2_ERF	PLT2	PLETHORA 2, Integrase-type DNA...		Lus10031260 [exp]	4.6	0.9441
AT2G45430	AT-hook	AHL22	AT-hook motif nuclear-localize...		Lus10007007 [exp]	5.8	0.9494
AT5G62680			Major facilitator superfamily ...		Lus10033106 [exp]	7.9	0.9234
AT4G30170			Peroxidase family protein (.1)		Lus10001442 [exp]	8.1	0.9448
AT3G44260		AtCAF1a	CCR4- associated factor 1a, Po...		Lus10004212 [exp]	8.2	0.9316
AT5G56040			Leucine-rich receptor-like pro...		Lus10032954 [exp]	9.0	0.9384

Compare expression of checked genes

Lus10021103 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.