Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016957 [exp] 286 / 1e-98 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021280 pacid=23178162 polypeptide=Lus10021280 locus=Lus10021280.g ID=Lus10021280.BGIv1.0 annot-version=v1.0 ATGATGGCAGCGGAGGCAGCAGAGCGGTCGTTGCCGGTGGTTCTGTTCGACGGCGAGCAAGAGATCAACGTTGGTACGGTGGTCCTCTGGCCTTACCTAA ATTTCAAGGGCTTCCAGTTTATGATCAGTCAAAGAATCGCGATTTCCCCTCACCAGTTCACCGTCTACATCGCTGACTGTACGAGGCGGGGATTCCGCAT CCCTGTCACTGGAAAGACGAACTTCTCCGCAATCTCGCGGACTGGGGGGTTCTTTTTCCTCGTGGTCTTAAAGCGATCAAGACGCGAGCGGAGGCGGAAG AGCCCGAGAAGGGAGAGGTCCCGCCGTAACCGTTTCGATCCGGCGATGAACGTGGTGCTCCTGAGGAGGGACGATGGCAGCGGGTACGGGTTTCAGCCGG AACTGGATGTGGGTCGGGCCGAGTACGAAAGGCGGGTGAGGGACCTGTCTATAGAGAGAGAGAGGTACTTGATGAACATGGGTTTTGTCCCGAGATTAGG GCTTGAATCGCTGAGTTTGGGCTCGGAAGAAGGATCTCCGTCACCGAGGGATAGCCGCGACGGCGGAGATATCGTCTGCGAAGAGTGTTCCAGCAGCGGA GGAGGAGAAGACTCGGAGTTCCATTGGTGTGTAAATGACCCGGTCACTTTTGGGTTCAGGTCACGAGTGGGCCCAATTACCCGGCCCGCTAGGGAGTCTG ATTGA
AA sequence Show only first row Show all	>Lus10021280 pacid=23178162 polypeptide=Lus10021280 locus=Lus10021280.g ID=Lus10021280.BGIv1.0 annot-version=v1.0 MMAAEAAERSLPVVLFDGEQEINVGTVVLWPYLNFKGFQFMISQRIAISPHQFTVYIADCTRRGFRIPVTGKTNFSAISRTGGFFFLVVLKRSRRERRRK SPRRERSRRNRFDPAMNVVLLRRDDGSGYGFQPELDVGRAEYERRVRDLSIERERYLMNMGFVPRLGLESLSLGSEEGSPSPRDSRDGGDIVCEECSSSG GGEDSEFHWCVNDPVTFGFRSRVGPITRPARESD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10021280 [exp]	0	1
AT1G01490			Heavy metal transport/detoxifi...		Lus10039286 [exp]	6.6	0.8967
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10027585 [exp]	23.2	0.8686
AT1G27180			disease resistance protein (TI...		Lus10017143 [exp]	102.0	0.8405
AT3G15780			unknown protein		Lus10023132 [exp]	121.4	0.8306
AT1G17860			Kunitz family trypsin and prot...		Lus10007889 [exp]	130.7	0.8328
AT1G14290		SBH2	sphingoid base hydroxylase 2 (...		Lus10036744 [exp]	202.3	0.8072
AT3G58880			F-box/RNI-like superfamily pro...		Lus10035669 [exp]	217.3	0.8138
AT1G04985			unknown protein		Lus10015157 [exp]	248.5	0.8080

Compare expression of checked genes

Lus10021280 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.