Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021689 pacid=23180356 polypeptide=Lus10021689 locus=Lus10021689.g ID=Lus10021689.BGIv1.0 annot-version=v1.0 ATGGTCTATGGTCGATCTGGAGGCTTGCTCCGGAGAGAGTCTGCTGCTGAAGCCTATAGTAACCTGGGCACAATGTCTATCATGCTGAAACTCTTATGTG AACTAAGAAGTATAGAGACTGCAATCTGTAAGAATAAAGTTGGAAACTGGGTAGGAAGGGGAGGAATCACATGGTTTGAGCCTCGAGGAACAAGCAGGCT CTATTCCATCAATTGGTTACATACCATTTCAGGAGACCTGACATCGCCAGGATATATGAAGCAAATGAAGGACTTGGTGAAAATGGTATTTGCTTTTATC ATTCTCCTTCTGTTTGGTCATACTGTCGATCTGGCTGGCATCACTCAAGCTTGGAGGAAATGGAACTGA
AA sequence Show only first row Show all	>Lus10021689 pacid=23180356 polypeptide=Lus10021689 locus=Lus10021689.g ID=Lus10021689.BGIv1.0 annot-version=v1.0 MVYGRSGGLLRRESAAEAYSNLGTMSIMLKLLCELRSIETAICKNKVGNWVGRGGITWFEPRGTSRLYSINWLHTISGDLTSPGYMKQMKDLVKMVFAFI ILLLFGHTVDLAGITQAWRKWN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10021689 [exp]	0	1
AT2G44180		MAP2A	methionine aminopeptidase 2A (...		Lus10000403 [exp]	1.7	0.9511
AT5G05320			FAD/NAD(P)-binding oxidoreduct...		Lus10034468 [exp]	2.4	0.9508
AT1G76710		ASHH1 ,SDG26	ASH1-RELATED PROTEIN 1, ASH1 R...		Lus10016600 [exp]	3.2	0.9370
AT1G02860		BAH1, NLA	nitrogen limitation adaptation...		Lus10030375 [exp]	4.9	0.9444
AT2G05630		ATG8D	Ubiquitin-like superfamily pro...		Lus10027186 [exp]	5.7	0.9373
AT1G33780			Protein of unknown function (D...		Lus10009463 [exp]	6.9	0.9272
AT1G17130			Family of unknown function (DU...		Lus10005575 [exp]	7.1	0.9203
AT5G03560			Tetratricopeptide repeat (TPR)...		Lus10027932 [exp]	7.7	0.9315
AT4G28830			S-adenosyl-L-methionine-depend...		Lus10011107 [exp]	9.5	0.9300
AT5G52210		ATGB1, ATARLB1	GTP-binding protein 1 (.1.2)		Lus10027446 [exp]	10.4	0.9315

Compare expression of checked genes

Lus10021689 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.