Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G44250 437 / 2e-152 Protein of unknown function DUF829, transmembrane 53 (.1.2) AT2G15695 394 / 3e-135 Protein of unknown function DUF829, transmembrane 53 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042660 [exp] 734 / 0 AT5G44250 464 / 3e-163 Protein of unknown function DUF829, transmembrane 53 (.1.2) Lus10019874 [exp] 374 / 9e-128 AT2G15695 457 / 4e-160 Protein of unknown function DUF829, transmembrane 53 (.1) Lus10014042 [exp] 374 / 1e-127 AT2G15695 453 / 2e-158 Protein of unknown function DUF829, transmembrane 53 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G127600 [exp] 600 / 0 AT5G44250 501 / 1e-177 Protein of unknown function DUF829, transmembrane 53 (.1.2) Potri.014G031800 [exp] 590 / 0 AT5G44250 496 / 7e-176 Protein of unknown function DUF829, transmembrane 53 (.1.2) Potri.004G142000 [exp] 443 / 7e-155 AT2G15695 537 / 0.0 Protein of unknown function DUF829, transmembrane 53 (.1) Potri.009G103500 [exp] 434 / 4e-151 AT2G15695 528 / 0.0 Protein of unknown function DUF829, transmembrane 53 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF05705 [flax] [poplar] DUF829 Eukaryotic protein of unknown function (DUF829)
Representative CDS sequence Show only first row Show all	>Lus10021741 pacid=23154303 polypeptide=Lus10021741 locus=Lus10021741.g ID=Lus10021741.BGIv1.0 annot-version=v1.0 ATGTTTGGGGGGAGGTATTACTGGGGGAGAAGGGGTGGGGTTAAGAGGGAAGGAATTGTAGTGGTGTTTGCTTGGATGTCCAGTCAAGATAAACATCTCA AGACCTATGTCGACCTCTACTCCTCTGTCGGTTGGGATTCTCTCGTCTGTCACTCTCAATTCCTCAACATGTTTTTCCCTGATAAGGCTGAAAGTTTAGC ATTTGAACTTCTCAATGAACTAATTGAGGAGCTTAAGACCGGACCATGCCCCGTGGTCTTGGCACCTTTCTCCGGTGGTCCAAAAGCTTGCATGTACAAG GTTCTTCAGATTGTCGAGGCAAAGAGTGAACTACAATTACATCCAGATGACTGCCGGTTGGTTAGAGACTGTCTATCAGGCCATATCTATGATTCATGTC CAGTGGATTTTACCAGTGATTTGGGAAGACGATTTGTCGTTCATCCATCTGTATTGAAAACGCAACATCCTCCCCGAATACTGTCATGGATGGCTAATGG TATTAGTAATGGCCTTGATGCTCTCTTTCTCAGTAGGTTTGAAGCAGAGCGAGCCCAGTATTGGCAGACTTTGTATTCCTCCGTAAATATTGGGGGTCCG TATCTTTTATTTTCCTCTGAACAAGATGACCTTGCTCCCTACCAAGTTATTCAAAATTTTGCTGGAAGACTATCAGAGCTTGGAGCAGATGTAAAGCTTA TGACAATGAATGGTTCTCCTCATGTAGGTCATTACCGGCTGCATCCAGTCAAGTACAAGGCTGCAGTGAGTGAGCTTCTCAGGAAGGCAGCCGCAGTTTA CTCAAAAAGAATACTGCGACTTGAAGGTGAAGGAATGGGGTTAGAAGGGGGACATGACGACATTCCTGACCCAATGTCCGAGCTGAGGAAAGCAGCAGGC AGCTCGAACCAGAGCTTTCGAGGAGTGAACAGTGCACCAGCTTCTGATCATTTCATGATGCCAACCTCAGTAGAGTACTATGAAGGTGGAGACGTTGGGT CAGTGCAAGATGAACATAAAGAAGGGTTGATCCGTGTACGTGGAGGACCCCCAGCCATCAACGCTCATGGGGTTTTGGGGCAGATACTCTTTGATGTCTG CGTTCCAAAGTATGTGGAAGACTGGGATATAAAGTCGACAGCTTCATTGAATAGACACCCTTATACTTCCACACGACGACATACAACTTTTAATCCTATG AAGTGCATTCGTCGGTCAAGGCTGTAG
AA sequence Show only first row Show all	>Lus10021741 pacid=23154303 polypeptide=Lus10021741 locus=Lus10021741.g ID=Lus10021741.BGIv1.0 annot-version=v1.0 MFGGRYYWGRRGGVKREGIVVVFAWMSSQDKHLKTYVDLYSSVGWDSLVCHSQFLNMFFPDKAESLAFELLNELIEELKTGPCPVVLAPFSGGPKACMYK VLQIVEAKSELQLHPDDCRLVRDCLSGHIYDSCPVDFTSDLGRRFVVHPSVLKTQHPPRILSWMANGISNGLDALFLSRFEAERAQYWQTLYSSVNIGGP YLLFSSEQDDLAPYQVIQNFAGRLSELGADVKLMTMNGSPHVGHYRLHPVKYKAAVSELLRKAAAVYSKRILRLEGEGMGLEGGHDDIPDPMSELRKAAG SSNQSFRGVNSAPASDHFMMPTSVEYYEGGDVGSVQDEHKEGLIRVRGGPPAINAHGVLGQILFDVCVPKYVEDWDIKSTASLNRHPYTSTRRHTTFNPM KCIRRSRL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G44250			Protein of unknown function DU...		Lus10021741 [exp]	0	1
AT3G57870		SCE1A, SCE1, AH...	SUMO CONJUGATING ENZYME 1A, EM...		Lus10009376 [exp]	1.4	0.9588
					Lus10017210 [exp]	2.4	0.9462
AT1G09390			GDSL-like Lipase/Acylhydrolase...		Lus10031438 [exp]	3.7	0.9423
AT3G10915			Reticulon family protein (.1.2...		Lus10029041 [exp]	7.5	0.9419
AT2G36950			Heavy metal transport/detoxifi...		Lus10022617 [exp]	8.8	0.9490
AT4G16520		ATG8F	autophagy 8f, Ubiquitin-like s...		Lus10000733 [exp]	13.1	0.9446
AT5G09640		SNG2, SCPL19	SINAPOYLGLUCOSE ACCUMULATOR 2,...		Lus10007731 [exp]	13.2	0.9426
AT5G49710			unknown protein		Lus10015965 [exp]	13.6	0.9432
AT5G16110			unknown protein		Lus10017599 [exp]	17.7	0.9236
AT5G54840		ATSGP1	Ras-related small GTP-binding ...		Lus10040044 [exp]	17.9	0.9400

Compare expression of checked genes

Lus10021741 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.