Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G26470 113 / 4e-32 Powdery mildew resistance protein, RPW8 domain (.1) AT4G33300 114 / 3e-30 ADR1-L1 ADR1-like 1 (.1.2) AT5G04720 83 / 3e-19 PHX21, ADR1-L2 PHOENIX 21, ADR1-like 2 (.1) AT1G33560 79 / 6e-18 ADR1 ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032759 [exp] 201 / 5e-62 AT1G33560 543 / 0.0 ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G035700 [exp] 151 / 4e-43 AT4G33300 889 / 0.0 ADR1-like 1 (.1.2) Potri.002G129300 [exp] 142 / 4e-40 AT4G33300 902 / 0.0 ADR1-like 1 (.1.2) Potri.007G039300 [exp] 41 / 0.0001 AT5G66900 540 / 0.0 Disease resistance protein (CC-NBS-LRR class) family (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021768 pacid=23154298 polypeptide=Lus10021768 locus=Lus10021768.g ID=Lus10021768.BGIv1.0 annot-version=v1.0 ATGGCGGTAACGGATCTTTTCGCCGGCGAGATCGCCACCGAGCTTCTCAAAACTCTGTTCACAATATCCCGGCGAGCCTGTCTCTGTAAATCCACCGCCG ACTCCCTGATTTCAAGCATCAACGACCTCCTACCAGTCATCCACGAGATCAAATACTCAGGCGTCGAGCTTCCCGCCTTCCGCCAATTCCAGCTCGATGG CCTCTCAGAAACCCTGAGAAACGGGCTTGAGCTCGCCCGGAAGGCACTCGGTTGCAGCCGATGGAACGTCTACAAAATGCTCCATCTCTCCAGGAGGATC GGAAAGCTGGGCAAGCGGGTCCATGTGGTCCTTGCGGATCTCGGTGTTCCTGAAGGGCCCGATTCAGGCTCACGTGCTCGCCGATGTTCATCACCTGAGG TTCGATTCGGTGGAGCGATTCGATAG
AA sequence Show only first row Show all	>Lus10021768 pacid=23154298 polypeptide=Lus10021768 locus=Lus10021768.g ID=Lus10021768.BGIv1.0 annot-version=v1.0 MAVTDLFAGEIATELLKTLFTISRRACLCKSTADSLISSINDLLPVIHEIKYSGVELPAFRQFQLDGLSETLRNGLELARKALGCSRWNVYKMLHLSRRI GKLGKRVHVVLADLGVPEGPDSGSRARRCSSPEVRFGGAIR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G26470			Powdery mildew resistance prot...		Lus10021768 [exp]	0	1
AT4G33300		ADR1-L1	ADR1-like 1 (.1.2)		Lus10021769 [exp]	1.0	0.9316
AT2G19130			S-locus lectin protein kinase ...		Lus10004283 [exp]	2.8	0.7597
AT5G46330		FLS2	FLAGELLIN-SENSITIVE 2, Leucine...		Lus10023323 [exp]	5.0	0.7246
AT1G33560		ADR1	ACTIVATED DISEASE RESISTANCE 1...		Lus10032759 [exp]	11.2	0.7275
AT3G13080		EST2, ATMRP3, A...	MULTIDRUG RESISTANCE PROTEIN 3...		Lus10013201 [exp]	12.5	0.7183
AT3G13080		EST2, ATMRP3, A...	MULTIDRUG RESISTANCE PROTEIN 3...		Lus10030718 [exp]	13.5	0.6870
AT5G05340			Peroxidase superfamily protein...		Lus10009934 [exp]	20.6	0.7274
AT4G24040		TREHALASE1, ATT...	trehalase 1 (.1)		Lus10023034 [exp]	22.2	0.7027
					Lus10029758 [exp]	27.2	0.6741
AT5G60590			DHBP synthase RibB-like alpha/...		Lus10037409 [exp]	30.2	0.6387

Compare expression of checked genes

Lus10021768 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.