Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G26230 108 / 3e-27 MAKR1 membrane-associated kinase regulator 1, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041214 [exp] 206 / 1e-66 AT5G26230 120 / 2e-33 membrane-associated kinase regulator 1, unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G090500 [exp] 164 / 8e-48 AT5G26230 150 / 5e-42 membrane-associated kinase regulator 1, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10021928 pacid=23157961 polypeptide=Lus10021928 locus=Lus10021928.g ID=Lus10021928.BGIv1.0 annot-version=v1.0 ATGAGCTCTTCTACAACGGCCAACAAAGGCCAGCTCCTCCCTCTCCACCTCTCCCCTCGGATCTCGATGGTCCGAACTCTCCTCCTAGCCTCCTCCTCCA CCTCATCTTCCTCCGACACTACCACCACTGCCTCCCGTGACTCCACCGGCAGCAGCTCCTCCTCCGCCTCCAGTGACCTCCTCCTCCTCTCCACCACCGG ATGCGACTCCTCCCGCCCTAGCTCCGTCACCGACGACGACTGTAAACGCCTCGGGAAAAAGACCGCAGGGAAGTACTTCTCCTTATCCAGATTCTCTTCT GTTTTCAAAAAAGATCACTCGTCCAATTTGATTTCGAAATCAAATGACAACAACAACAATAATAATAGAGATAATAATAGCGCCGAGAATAATATTAATG GTTCTTCGGTGAGGAGGATGAGTGTGACGGCGAAGGAAGTTATCAGAAAGTACTTGAAGAAAGTTAAGCCGCTTTACGAGAAGCTCTCCCAGAAGCAGAT GCAGAAAATGGGCTTCCCGAACGGTACTACTACTATGTCGTCTGGATCCGGAAAGGAAGATGTGATCCCAAACGACGTCATTTTAGGGAAGGACTCGATT AGCGGCGGCGGCGGCGCCAACAACACGGCGGCGCCTGTTAGGGGCTTCTCGCACTCGTTCTCCGGCAACTTGAGGTACCCGAGGAAGCGGAGCTGCGCCA CCAGCTGTCCGTCGTCGATGAGGTCGTCACCGAGCCACTCCGGTGTGCTTTCACGGAGCGGCGGGTCGGGTAATGCAAGACCCGGCAGATCAGGAGGCGG TTGCGGCTGCGGAGACGTGTCGTCCATGGAAGAACTGCAGAGCGCGATCCAAGGAGCGATCACACATTGCAAAAACTCGATGATGCAGCACGCTGGGAAG GCGATATTGATCAGCAACGAAATCTAA
AA sequence Show only first row Show all	>Lus10021928 pacid=23157961 polypeptide=Lus10021928 locus=Lus10021928.g ID=Lus10021928.BGIv1.0 annot-version=v1.0 MSSSTTANKGQLLPLHLSPRISMVRTLLLASSSTSSSSDTTTTASRDSTGSSSSSASSDLLLLSTTGCDSSRPSSVTDDDCKRLGKKTAGKYFSLSRFSS VFKKDHSSNLISKSNDNNNNNNRDNNSAENNINGSSVRRMSVTAKEVIRKYLKKVKPLYEKLSQKQMQKMGFPNGTTTMSSGSGKEDVIPNDVILGKDSI SGGGGANNTAAPVRGFSHSFSGNLRYPRKRSCATSCPSSMRSSPSHSGVLSRSGGSGNARPGRSGGGCGCGDVSSMEELQSAIQGAITHCKNSMMQHAGK AILISNEI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G26230		MAKR1	membrane-associated kinase reg...		Lus10021928 [exp]	0	1
AT4G36920	AP2_ERF	FL1, FLO2, AP2	FLORAL MUTANT 2, FLOWER 1, APE...		Lus10026477 [exp]	1.0	0.9528
AT5G49100			unknown protein		Lus10037496 [exp]	4.0	0.9128
AT2G15790		CYP40, SQN	SQUINT, CYCLOPHILIN 40, peptid...		Lus10023860 [exp]	6.6	0.9331
AT3G28040			Leucine-rich receptor-like pro...		Lus10035687 [exp]	8.1	0.9276
AT1G47490		ATRBP47C	RNA-binding protein 47C (.1.2)		Lus10021754 [exp]	9.4	0.9295
AT1G50430		ST7R, PA, LE, 7...	PARVA, LEPIDA, DWARF 5, DELTA5...		Lus10035723 [exp]	9.8	0.9311
AT1G10850			Leucine-rich repeat protein ki...		Lus10029075 [exp]	11.6	0.9038
AT2G46330		ATAGP16, AGP16	arabinogalactan protein 16 (.1...		Lus10000542 [exp]	15.0	0.9029
AT5G49665			Zinc finger (C3HC4-type RING f...		Lus10028223 [exp]	17.9	0.8957
AT2G28550	AP2_ERF	TOE1, RAP2.7	TARGET OF EARLY ACTIVATION TAG...		Lus10019905 [exp]	21.0	0.9176

Compare expression of checked genes

Lus10021928 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.