Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G36740 390 / 7e-114 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) AT4G14920 368 / 2e-106 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) AT1G05380 368 / 2e-106 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1.2) AT5G36670 356 / 6e-102 RING/FYVE/PHD zinc finger superfamily protein (.1) AT3G14980 266 / 3e-72 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) AT5G58610 188 / 4e-48 PHD finger transcription factor, putative (.1) AT5G63900 102 / 4e-22 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (.1) AT2G37520 99 / 1e-20 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (.1) AT2G36720 92 / 3e-18 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (.1) AT3G53680 84 / 5e-16 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042602 [exp] 2808 / 0 AT5G36740 607 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Lus10022055 [exp] 1001 / 0 AT5G36740 154 / 7e-40 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Lus10006110 [exp] 423 / 2e-123 AT4G14920 868 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Lus10010562 [exp] 419 / 1e-122 AT4G14920 847 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Lus10015266 [exp] 194 / 3e-49 AT5G58610 558 / 7e-176 PHD finger transcription factor, putative (.1) Lus10042283 [exp] 178 / 2e-44 AT3G08590 993 / 0.0 2,3-biphosphoglycerate-independent phosphoglycerate mutase 2, Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (.1.2) Lus10018681 [exp] 166 / 1e-41 AT5G58610 308 / 1e-90 PHD finger transcription factor, putative (.1) Lus10007741 [exp] 161 / 4e-40 AT5G58610 323 / 4e-96 PHD finger transcription factor, putative (.1) Lus10012522 [exp] 154 / 3e-38 AT5G58610 285 / 4e-84 PHD finger transcription factor, putative (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G051400 [exp] 551 / 4e-169 AT5G36740 625 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Potri.005G211100 [exp] 535 / 2e-162 AT5G36740 635 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Potri.010G087700 [exp] 442 / 5e-130 AT4G14920 805 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Potri.008G152600 [exp] 427 / 9e-125 AT4G14920 769 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Potri.001G392801 [exp] 272 / 6e-74 AT3G14980 620 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1) Potri.001G153200 [exp] 257 / 3e-73 AT1G05380 340 / 1e-104 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (.1.2) Potri.009G072600 [exp] 206 / 2e-53 AT5G58610 453 / 1e-139 PHD finger transcription factor, putative (.1) Potri.002G118600 [exp] 187 / 7e-48 AT5G58610 436 / 5e-137 PHD finger transcription factor, putative (.1) Potri.006G120200 [exp] 79 / 2e-14 AT2G36720 848 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (.1) Potri.016G097300 [exp] 76 / 1e-13 AT2G36720 830 / 0.0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022053 pacid=23160293 polypeptide=Lus10022053 locus=Lus10022053.g ID=Lus10022053.BGIv1.0 annot-version=v1.0 ATGTCAGTGATGAGACTTAGATCTAGGGGCAAATCGTTGGGGACAGTCAATGAAGGTGAAGGGACGGGAAGGATAACAAGGGCCAAAGCCGCCGTTCAAG AAGGAGGGGGTAATGGTACATACTGTAAAGTGATGATTTTTGATGAAGACGGAGATGGATTATTGTCCAATGAGGATGCGGCGCCGGGACTAAACGAGAG CGATGAGGAATGCTTTGGGAGAAGTGGCTTTGAGAGGAAACGGGATAGGGTAGATAGTGAAGTCGAGAGTGAAAGTGGCACTGACAGAAAGAAGAAAGTG AAGGATAATGGTTCGGTAGGTCAAGGAGAAGTAGCCAGTAGAGTTCTCTCATCGAGTGCTTCCGCAGAAGCTGAGTGCTGTAAGCATTCTGGGGCGAGAC CGATTGTTCTTGGGCTAGGAATGTTTGGAGCTGGTGGGTCACGAACCAGAACATTTGATGCGAACAAAGAGTTTCATGGGATTCCCGATGGTAAATTATT CGATACAACTAAGGATGACGGAGGATTGAGAAGTAGAGGTAAGGCTAAGTTCAAGGAGGAATGTGTGGGAGAAATGAGCACCGATTCAGCTAAAGATAAT GATTGTAAATTGATTGATTCTGGCAGAGGGGAAGATGGTTCATGTGGTGGTCAGAACAATGTGCTAGAAGGAGAGGGTAGAGATGCTCCAAACAATGACG AATCCAGCGAGCTGTGTGGTATAGCAATGAGTAAGAAAATCAACGAGACAGAAAGTGGAGGTTGTGTTATTCAGACGAAGAAAGCAAATGAAAAGGATTT GGATGGTCATGTGACAGTTACCCATAGGGTTCTACTGTTCACTGGTTCGGGAAAAAGCGAGCCTGAGAAGGATCTTGCTGGTGAGAAGAGCAAGGATGTA GTAGTTGGTACTGGGACCAACATAGCACGCGTGTCTGAAATGATAAATTCTGAGGTCAAGGAGCACGATGAATTAAGGAAAGAACTGGATCACCCTTCTG ATTGTAAATTATTAGAGGAAGCAAAAGAAGATGGGCAGGAAAGCCGAATAACAGCTACATGTGGTGAGGAAAAAACAGGAAAAGATCTTACAGATTTTAA TGGGGACGAGGACTGTCATTTGACAAATATTGGCAAAGAAGACGAGGGTCTATTTGCTGATCAGAATATTGTTCTGGAAGGGCATGAGAGAACTGAGATG AAAAATAACAATTCTAATGAGCATAACCAAAAAATTATTCACGAAGCTGATGATGGAAGGGAAGAGAGTGAGAAAGATGGTGGGAAGAAAGGTGGACGTG CTCTTGTACGAAAGATGAAGGCACGGGGAAAAGATTTAGACGGTCAAATGCATATAGTTCGCAGAGTTCTGCGGTCAAACACCTTGCCACAAGCAGAATG CGATAAGGATCTGGTTTTCTTAGGGGTTGAAACCGGGACAGATGAATGTAATGAATCTGACTCCGAGGTTAAAAAAAAGTGTCAACAGCTGCTTGATATT GAGTGCACTGGTCCTCTGGTGGATGAGGAGAAACAGTTAAAACGTAAGCGTGGAAGACCACCCAAGAGTAGTCCTAAGGGAGAAACTGATACACCCTGTA AGCGCGGTAGACCACCCAAGGGTTGGCTTAAGGAAGAAACTGATTCACCCCGTAAGCGTGGAAGACCTTTTAAAGTTTCCAGGTCGAACAGTGCTAACAA GATTAGATTGAAATATCAAGAGAGGGTAGAAACTGGCAAACCACGAGGCAGACCCAAGAAGCTTTGTTTGACTGATGATGACTGCGGTGATGTAGCGGTT AAAGAAGTCGAAAAGGACAATAATAATGAGAGCCGTAAACGGGGCCCAGGTAGGCCACCAAAGGTGAAACCCGGGAAGAAAAAACAAATGCATGTAAGGC CCCGTGAGAAGCTTCAGAATACATTGTTGGAGAGAATGAGCAAAACTGATGAGGGTGATGCTCATGTTGGAAAAGAACTTGGCTTCAACAAATCTGAGGT GCAAAAACCTTCCAAATCTAAGGAGGTCGATGAGGAGCTGGGACAAGAGAAAGTCAAACCAACGGCTGGAGACATTGGAGCAAGGAAGTTAGAAAAGCAG TTGGTGAGAGATAAAATCGTGGACATGCTGTTGAGTGCCGGTTGGACAATTGATTATAGGCCCAGGAATGGAAGAGTATATAATGATGCAGTGTATGTTA ATCCTGAAGGAAGAACTCATTGGTCGGTGACTAAGGCTTACAGGATGCTTAAAGATCATTATGATAACGGTGGTGGTCATTCTGCATCTTGCAAACCTGG ATTCAAGTTTACTCCACTTTCTGATGAAGAAATAGAGGTTCTGCGTAGAGTAGCTGGTAAAGTGAGGTGTGATAAAAATAAAAAGAAAAAGGATTGGAGG CGGGAAAAGCAGGGTCTGAAGAAAGGTGGAGCTCAAATAAAGCCAAAAGGGAAAGGGAAACTCAATAAAGGAGGTAAGATGACGAAGTCGAAAAAGAGCT CAAAACGTTTGTCATCATCGGACCAAATGACAGCAGTTAAGGGGAATAAACATCGCAATGATACAATGCGATATGGGTTGATGGTTCGTAACACCACAGA ACTTTCAGACCGTGATGGTGGCAGTTATCTGCTATATAATGGGAAGCGTACTGTACTTTCCTGGATGATAGATTTGGGCTGCCTGCTACTGGATGCCAAG GTGGAGTACATAGAAGGTCAAAAAACGCAGACAGCTTTTACGGGGACAATTCTATCAGAAGGAATTCAGTGTGATTGCTGCAGTAGAACTTTTACTGTTC CTCTATTTGTTAACCATGCTGGTTGCAAAACCCATGACTCGTACAATATCACATATTTAGATGATGGACGTTCACTCTTGCAGTGCCAGCTAGATTCATG GCTTAAACAAAAAGAGCCTGATCTTAAAGGTTTCCATTTTGTTGATACTAATGGTGACGATCCAAATGATGACACCTGTGGGATCTGTGGAGATGGGGGA GACCTGATTTGTTGTGATGGCTGCCCATCAACCTTCCATCAGACCTGTCTGGGGTTTGAGAATTTTCCTTCAGGGTTCTGGAACTGTATATACTGTTGCT GCAAATTTTGTGGCGAAGGGGGTGAGAAAGATCCTACAGCCGTGCAGCCATTACTTCAATGTAGCCTGTGCGAGGAATCATATCACGTATCTTGTGTCCA GGAAAATGATTCTCAAGATGATGACCCAATGTTTCAATCATTTTGTGGGAAGAATTGCCAACAGCTGTATCGGAGGCTACAGTTGCTTCTAGGGGTAAAG CATGAACTTGAAGATGGGTTTTCATGGACCCTTGTTCGACGGTTTGATGTTGGGACTGATATTTCTCTTAGTGGGATGCGACAAAAGGTTGAATGCAACT CCAAGACGGCTGTTGCTTTGCAGATAATGGATGAGTGTTTCCTACCCATGGCTGACCATAGAAGTGGGGTTAATTTGATTCGTAATGTTGTTTATAACTT CGGGTCAAACTTCACCAGACTGAATTACAGCGGTTTTCTAACTATGGTCTTGGAGAGAGGGGATGAAATGATATCTGCTGCATCCATTCGGATCCACGGG AATCATTTGGCAGAGATGCCTTTCATTGGTACCCGTCATATGTATAGGCGGCAAGGAATGTGTCGGCGCCTTTTAAGTGCAATTAATAGTGCTCTTTCCT CGCTAAACGTGGAGAGATTGGTAATACCTGCAATATCTGAGTTAAAGGAAACATGGACCTCTGTCTTCGGTTTCGCACCTCTTGAGAGATTAAGCAGCCC AAAAATCAGAAACACGAACATGCTTGTGTTTCCTAGAGTTGACATGTTACAGAAACCAGTGTTGATTCAACAGCCTGATGGATACAACATGGCTACTGCC GAAGGTTCAAAATTGAATGATTCTGATGATAGATTACCAGCTGGATTTGATTTAAACAGCACTTATGAGCCTACTGAATCTTGCTCGCTTCCTGATGGCT GCTTGAATAATACTTCCGACTTGCCACATAATCTTAGTGATGGAGAGCCCCTTGATAAAATCTGTGAGATTCCTGGTAATGTGGAGAAAAATGGCGCAAA TATACATAATCCTATCTCTGTTGGTGATGCCAGGGGACAAAGTGGAAAGTTTTCTGAACCTATGGCTGGCATTACTGATGAGAGAAAATGGGAATCGGGT TCCAAATCATTGATTTGCCATGTTGGTTCCGAATCTGGTGATTGTAGGAGACAATCCCTTGCCGATCATAAAGCAGCTCCTTCGGAAGTGAATCTGGAAG AGAAAATGGTTCCTGGTAAAGCAGCTCCTTCTGAAGTGAATCCCGAAGAGAAAATGGTTGATCTAAATCTGACTTCACATGAAGGCTCTGTCGATGATAT GCAAGTCATGGATGATGAACACACTGGTCTGCCTTTGAAGTCCGAGCCGTCAAGTACTGATGATATCCATCAGGGATCCGAAACCAAGATCTTGCCTGAT GAAATACTACAGTCACACGAAAATGATGAAAGTAATAGCCGTTGTGGCATCCCTGATGATCATCAAGATGATTCATTTCAGCAGAAGAACTTGAACGAGG CACATGGGAGGGAAGTTGGATCAAACCCTCTAATAACCAAGTCGAGTGACATCTCCGTTGCAGCTGAAAAAGATGCCCCTTCTCTGATGAAGCAGCGTCA GCCGAATACCGAGGATATGCAGCCCGCGAGTCCAGCTGCTGAGGTGGATATTGACAGACTGACGCAGCATGAGAAGGAAGCTGAATCAACCCCTCTAATC ACCAACGAACCTTCTCATGCTGGTGCTCCAGATACCATGGTGGAACCTCAATGTCAAACGCACGAGCACGAACGAGATGCCCCTTCTCTGATGAAGCAGC CTCAGCCGAAAACTGAGGATATGCAGCCCGTGGATATTGACAGAATGACTCAGTGCAGTTTGGAACCAATGTGTTCTTCTTCGAGGTCTGGCCCTGGTGT CGGGATTCATTTGCCCGATTTGGGAGCATCAGTTCCTACAATACCCCAAAGGTGA
AA sequence Show only first row Show all	>Lus10022053 pacid=23160293 polypeptide=Lus10022053 locus=Lus10022053.g ID=Lus10022053.BGIv1.0 annot-version=v1.0 MSVMRLRSRGKSLGTVNEGEGTGRITRAKAAVQEGGGNGTYCKVMIFDEDGDGLLSNEDAAPGLNESDEECFGRSGFERKRDRVDSEVESESGTDRKKKV KDNGSVGQGEVASRVLSSSASAEAECCKHSGARPIVLGLGMFGAGGSRTRTFDANKEFHGIPDGKLFDTTKDDGGLRSRGKAKFKEECVGEMSTDSAKDN DCKLIDSGRGEDGSCGGQNNVLEGEGRDAPNNDESSELCGIAMSKKINETESGGCVIQTKKANEKDLDGHVTVTHRVLLFTGSGKSEPEKDLAGEKSKDV VVGTGTNIARVSEMINSEVKEHDELRKELDHPSDCKLLEEAKEDGQESRITATCGEEKTGKDLTDFNGDEDCHLTNIGKEDEGLFADQNIVLEGHERTEM KNNNSNEHNQKIIHEADDGREESEKDGGKKGGRALVRKMKARGKDLDGQMHIVRRVLRSNTLPQAECDKDLVFLGVETGTDECNESDSEVKKKCQQLLDI ECTGPLVDEEKQLKRKRGRPPKSSPKGETDTPCKRGRPPKGWLKEETDSPRKRGRPFKVSRSNSANKIRLKYQERVETGKPRGRPKKLCLTDDDCGDVAV KEVEKDNNNESRKRGPGRPPKVKPGKKKQMHVRPREKLQNTLLERMSKTDEGDAHVGKELGFNKSEVQKPSKSKEVDEELGQEKVKPTAGDIGARKLEKQ LVRDKIVDMLLSAGWTIDYRPRNGRVYNDAVYVNPEGRTHWSVTKAYRMLKDHYDNGGGHSASCKPGFKFTPLSDEEIEVLRRVAGKVRCDKNKKKKDWR REKQGLKKGGAQIKPKGKGKLNKGGKMTKSKKSSKRLSSSDQMTAVKGNKHRNDTMRYGLMVRNTTELSDRDGGSYLLYNGKRTVLSWMIDLGCLLLDAK VEYIEGQKTQTAFTGTILSEGIQCDCCSRTFTVPLFVNHAGCKTHDSYNITYLDDGRSLLQCQLDSWLKQKEPDLKGFHFVDTNGDDPNDDTCGICGDGG DLICCDGCPSTFHQTCLGFENFPSGFWNCIYCCCKFCGEGGEKDPTAVQPLLQCSLCEESYHVSCVQENDSQDDDPMFQSFCGKNCQQLYRRLQLLLGVK HELEDGFSWTLVRRFDVGTDISLSGMRQKVECNSKTAVALQIMDECFLPMADHRSGVNLIRNVVYNFGSNFTRLNYSGFLTMVLERGDEMISAASIRIHG NHLAEMPFIGTRHMYRRQGMCRRLLSAINSALSSLNVERLVIPAISELKETWTSVFGFAPLERLSSPKIRNTNMLVFPRVDMLQKPVLIQQPDGYNMATA EGSKLNDSDDRLPAGFDLNSTYEPTESCSLPDGCLNNTSDLPHNLSDGEPLDKICEIPGNVEKNGANIHNPISVGDARGQSGKFSEPMAGITDERKWESG SKSLICHVGSESGDCRRQSLADHKAAPSEVNLEEKMVPGKAAPSEVNPEEKMVDLNLTSHEGSVDDMQVMDDEHTGLPLKSEPSSTDDIHQGSETKILPD EILQSHENDESNSRCGIPDDHQDDSFQQKNLNEAHGREVGSNPLITKSSDISVAAEKDAPSLMKQRQPNTEDMQPASPAAEVDIDRLTQHEKEAESTPLI TNEPSHAGAPDTMVEPQCQTHEHERDAPSLMKQPQPKTEDMQPVDIDRMTQCSLEPMCSSSRSGPGVGIHLPDLGASVPTIPQR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G36740			Acyl-CoA N-acyltransferase wit...		Lus10022053 [exp]	0	1
AT5G36740			Acyl-CoA N-acyltransferase wit...		Lus10042602 [exp]	1.0	0.9404
AT1G79280		AtTPR, NUA	TRANSLOCATED PROMOTER REGION, ...		Lus10030142 [exp]	3.9	0.9134
AT4G21430		B160	Zinc finger, RING-type;Transcr...		Lus10020084 [exp]	4.2	0.9138
AT5G18230			transcription regulator NOT2/N...		Lus10002632 [exp]	5.3	0.9073
AT1G73460			Protein kinase superfamily pro...		Lus10026360 [exp]	5.9	0.8843
AT1G65440		GTB1	global transcription factor gr...		Lus10003130 [exp]	5.9	0.8927
AT5G14610			DEAD box RNA helicase family p...		Lus10001272 [exp]	8.2	0.8752
AT1G01950		AtKINUb, ARK2	Arabidopsis thaliana KINESIN U...		Lus10038007 [exp]	8.4	0.8825
AT3G11220		ELO1	ELONGATA 1, Paxneb protein-rel...		Lus10024652 [exp]	9.6	0.8310
AT3G53320			unknown protein		Lus10023170 [exp]	14.8	0.8713

Compare expression of checked genes

Lus10022053 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.