Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G03070 388 / 3e-138 Bax inhibitor-1 family protein (.1.2) AT3G63310 363 / 2e-128 BIL4 BRZ-INSENSITIVE-LONG HYPOCOTYLS 4, Bax inhibitor-1 family protein (.1) AT4G02690 360 / 3e-127 Bax inhibitor-1 family protein (.1) AT4G14730 261 / 3e-88 Bax inhibitor-1 family protein (.1) AT4G15470 243 / 8e-81 Bax inhibitor-1 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042631 [exp] 466 / 4e-169 AT1G03070 408 / 5e-146 Bax inhibitor-1 family protein (.1.2) Lus10004077 [exp] 376 / 2e-133 AT1G03070 404 / 2e-144 Bax inhibitor-1 family protein (.1.2) Lus10041240 [exp] 234 / 1e-77 AT4G15470 369 / 2e-130 Bax inhibitor-1 family protein (.1) Lus10021950 [exp] 168 / 9e-52 AT4G15470 288 / 8e-99 Bax inhibitor-1 family protein (.1) Lus10004078 [exp] 67 / 6e-13 AT4G02690 85 / 2e-19 Bax inhibitor-1 family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G049000 [exp] 376 / 2e-133 AT1G03070 393 / 2e-140 Bax inhibitor-1 family protein (.1.2) Potri.005G214000 [exp] 371 / 1e-131 AT1G03070 310 / 2e-107 Bax inhibitor-1 family protein (.1.2) Potri.008G157100 [exp] 291 / 6e-100 AT3G63310 243 / 4e-81 BRZ-INSENSITIVE-LONG HYPOCOTYLS 4, Bax inhibitor-1 family protein (.1) Potri.005G213900 [exp] 283 / 9e-97 AT3G63310 259 / 9e-88 BRZ-INSENSITIVE-LONG HYPOCOTYLS 4, Bax inhibitor-1 family protein (.1) Potri.010G028900 [exp] 236 / 2e-78 AT4G15470 348 / 2e-122 Bax inhibitor-1 family protein (.1) Potri.008G199200 [exp] 233 / 4e-77 AT4G15470 348 / 3e-122 Bax inhibitor-1 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0453 [flax] [poplar] Apoptosis-Inhib PF01027 [flax] [poplar] Bax1-I Inhibitor of apoptosis-promoting Bax1
Representative CDS sequence Show only first row Show all	>Lus10022085 pacid=23160204 polypeptide=Lus10022085 locus=Lus10022085.g ID=Lus10022085.BGIv1.0 annot-version=v1.0 ATGTGGCCGCCGCAGCCGTTCCGGAAGAACAACGACGTCGAGATTGGGGGCTCCTCCTCCAGGCCTCTCTACCCGATGATGCTCGAGAGCCCCGAGCTCC GCTGGTCTTTCATCAGGAAAATCTACTCCATCATCACCATCCAGTTGCTCGCTACTGTCGCCGTCGCCGCCACTGTCGTCTCTGTACGCCCGATTGCGGT CTTCTTCGTTACTACCTCCGCCGGATTGGCTCTTTACATCGTCCTCATCATCACGCCCTTCATCGTTTTGTGTCCGCTCTATTACTATCACCAGAAGCAT CCAGTGAATTACCTGCTCCTAGGGATTTTCACAGTCGCGATTTCCTTTGCCGTGGGATTGAGCTGTGCATTCACAAGTGGGAAAGTAATCCTTGAAGCGG CAATCCTGACAGCAGTTGTGGTTGTGGGTCTAACCCTCTTCACATTCTGGGCGGCGAAGAGAGGCTATGATTTCAATTTCCTTGGACCCTTTTTGTTTGG TGCTATTCTCGTTCTCATGGCGTTTGCTATCATCCAGATCTTCTTCCCGTTGGGTAAGCTCTCTACGATGATCTACGGGTGCCTGGCTGCAATCATCTTC TGTGGCTATATTGTGTACGACACCGACAACCTCATCAAGCGCTACACTTACGACGAGTACATCTGGGCTGCGGTGTCTCTCTACTTGGATATCATCAACT TGTTCCTCTCGCTGTTGACCATATTCAGGGCTGCTGATTCGTAA
AA sequence Show only first row Show all	>Lus10022085 pacid=23160204 polypeptide=Lus10022085 locus=Lus10022085.g ID=Lus10022085.BGIv1.0 annot-version=v1.0 MWPPQPFRKNNDVEIGGSSSRPLYPMMLESPELRWSFIRKIYSIITIQLLATVAVAATVVSVRPIAVFFVTTSAGLALYIVLIITPFIVLCPLYYYHQKH PVNYLLLGIFTVAISFAVGLSCAFTSGKVILEAAILTAVVVVGLTLFTFWAAKRGYDFNFLGPFLFGAILVLMAFAIIQIFFPLGKLSTMIYGCLAAIIF CGYIVYDTDNLIKRYTYDEYIWAAVSLYLDIINLFLSLLTIFRAADS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G03070			Bax inhibitor-1 family protein...		Lus10022085 [exp]	0	1
AT4G31420	C2H2ZnF		Zinc finger protein 622 (.1.2)		Lus10026949 [exp]	4.1	0.9420
AT1G80180			unknown protein		Lus10030064 [exp]	9.7	0.9233
AT1G05000		AtPFA-DSP1	plant and fungi atypical dual-...		Lus10035333 [exp]	9.7	0.9353
AT4G24290			MAC/Perforin domain-containing...		Lus10010894 [exp]	12.0	0.9141
AT4G17030		ATHEXPBETA3.1, ...	expansin-like B1 (.1)		Lus10040115 [exp]	17.2	0.8583
AT4G02380		SAG21, ATLEA5	Arabidopsis thaliana late embr...		Lus10008170 [exp]	18.5	0.9234
AT3G24170		ATGR1	glutathione-disulfide reductas...		Lus10000758 [exp]	19.6	0.9277
AT4G25225			unknown protein		Lus10027209 [exp]	27.5	0.9008
AT4G02280		ATSUS3, SUS3	sucrose synthase 3 (.1)		Lus10013417 [exp]	27.6	0.9201
AT4G24290			MAC/Perforin domain-containing...		Lus10012717 [exp]	28.6	0.9105

Compare expression of checked genes

Lus10022085 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.