Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G51550 49 / 5e-07 FER FERONIA, Malectin/receptor-like protein kinase family protein (.1) AT1G30570 43 / 4e-05 HERK2 hercules receptor kinase 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032976 [exp] 143 / 9e-40 AT3G51550 682 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10003942 [exp] 136 / 1e-37 AT3G51550 656 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10032971 [exp] 135 / 3e-37 AT3G51550 706 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10014185 [exp] 47 / 2e-06 AT3G51550 1254 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10016907 [exp] 45 / 9e-06 AT3G04690 967 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Lus10037768 [exp] 44 / 3e-05 AT3G04690 400 / 1e-147 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Lus10029945 [exp] 0 / 1 AT3G51550 424 / 1e-137 FERONIA, Malectin/receptor-like protein kinase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G095566 [exp] 52 / 4e-08 AT3G51550 270 / 2e-81 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G095900 [exp] 50 / 2e-07 AT3G51550 845 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G096600 [exp] 49 / 4e-07 AT3G51550 829 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G096800 [exp] 48 / 7e-07 AT3G51550 823 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G097001 [exp] 48 / 7e-07 AT3G51550 506 / 2e-168 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G096000 [exp] 47 / 1e-06 AT3G51550 832 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.016G138700 [exp] 47 / 2e-06 AT3G51550 1252 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.008G105500 [exp] 45 / 7e-06 AT3G04690 999 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Potri.010G145600 [exp] 44 / 2e-05 AT3G04690 1027 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Potri.006G110000 [exp] 42 / 0.0001 AT3G51550 1256 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022104 pacid=23146477 polypeptide=Lus10022104 locus=Lus10022104.g ID=Lus10022104.BGIv1.0 annot-version=v1.0 ATGGCTTTCTGGGTCAACATCATGAATCAAACGGATGGGGGTTATGTGGATGTCATATATGAAGCAGGTGAGAACGAAATCCCTCTGTTCAAAGATTACT TGTCGAGAATGGAAGGAGCTAAGAATAAGAACCTCTTCATCGCTTTTTCTCCTTATGAGGTGAACAACGCCTACATAATTTCCATCCTCAATGGAGTTGA GATCTACAAATTGAGCTCCTCCAACAATCTAGTAGTCAGACCCAACCCTAGCCTGCCACCACTTCAATCCCAGTCCTCCTCATCAAAATCCGGTAGAAAC CAGACAAAATTAGTCGCTACCGTAGCCGGCAGCATTCTTTCAGGTTTGCTGATGCTCTCCCTTTTACTCTTGTTCATCATTAGGCAGAAACGGAAAGTTA AGGGCCGAAATGTTGGAGGCTCTACTTCTCCTTCTACAGGGTTTGCAAAATTTTCTTTCATTCAATCAACGTTGCCCTCAATAAAATTTGCTGTCGATTT TCACTAA
AA sequence Show only first row Show all	>Lus10022104 pacid=23146477 polypeptide=Lus10022104 locus=Lus10022104.g ID=Lus10022104.BGIv1.0 annot-version=v1.0 MAFWVNIMNQTDGGYVDVIYEAGENEIPLFKDYLSRMEGAKNKNLFIAFSPYEVNNAYIISILNGVEIYKLSSSNNLVVRPNPSLPPLQSQSSSSKSGRN QTKLVATVAGSILSGLLMLSLLLLFIIRQKRKVKGRNVGGSTSPSTGFAKFSFIQSTLPSIKFAVDFH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G51550		FER	FERONIA, Malectin/receptor-lik...		Lus10022104 [exp]	0	1
AT5G59190			subtilase family protein (.1)		Lus10040251 [exp]	5.1	0.7659
AT1G53000		AtCKS, KDSB	CMP-KDO synthetase, Nucleotide...		Lus10040889 [exp]	5.2	0.7791
AT5G63810		BGAL10	beta-galactosidase 10 (.1)		Lus10023976 [exp]	6.1	0.6175
AT3G23730		XTH16	xyloglucan endotransglucosylas...		Lus10021638 [exp]	9.2	0.6995
AT1G04670			unknown protein		Lus10002298 [exp]	10.1	0.7308
AT1G04110		SDD1	STOMATAL DENSITY AND DISTRIBUT...		Lus10029577 [exp]	10.6	0.6740
AT2G02450	NAC	LOV1, ANAC034, ...	LONG VEGETATIVE PHASE 1, Arabi...		Lus10003366 [exp]	11.2	0.6832
AT1G17930			Aminotransferase-like, plant m...		Lus10001981 [exp]	11.7	0.7308
					Lus10021979 [exp]	12.7	0.6916
					Lus10004853 [exp]	13.0	0.7308

Compare expression of checked genes

Lus10022104 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.