Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G32700 2282 / 0 TEB TEBICHI, helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding (.2) AT2G42270 142 / 2e-33 U5 small nuclear ribonucleoprotein helicase (.1) AT1G20960 137 / 5e-32 EMB1507 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) AT5G61140 124 / 6e-28 U5 small nuclear ribonucleoprotein helicase (.1.2) AT1G59760 110 / 7e-24 AtMTR4 homolog of yeast MTR4, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) AT2G06990 107 / 9e-23 HEN2 hua enhancer 2, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) AT3G27730 99 / 2e-20 MER3, RCK ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) AT3G46960 88 / 6e-17 RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) AT1G70070 88 / 7e-17 ISE2, EMB25, PDE317 PIGMENT DEFECTIVE 317, INCREASED SIZE EXCLUSION LIMIT 2, EMBRYO DEFECTIVE 25, DEAD/DEAH box helicase, putative (.1) AT3G20540 77 / 1e-13 PolIB, POLGAMMA1 polymerase I B, polymerase gamma 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007675 [exp] 722 / 0 AT4G32700 81 / 4e-16 TEBICHI, helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding (.2) Lus10007673 [exp] 420 / 2e-130 AT4G32700 313 / 6e-94 TEBICHI, helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding (.2) Lus10025168 [exp] 129 / 2e-29 AT1G20960 3286 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10016048 [exp] 125 / 3e-28 AT1G20960 3558 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10042628 [exp] 122 / 8e-28 AT1G20960 921 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10040524 [exp] 111 / 6e-24 AT5G61140 3299 / 0.0 U5 small nuclear ribonucleoprotein helicase (.1.2) Lus10027599 [exp] 110 / 1e-23 AT2G06990 1633 / 0.0 hua enhancer 2, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Lus10014551 [exp] 105 / 3e-22 AT3G27730 1354 / 0.0 ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) Lus10032137 [exp] 105 / 4e-22 AT3G27730 1291 / 0.0 ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G036600 [exp] 2605 / 0 AT4G32700 2501 / 0.0 TEBICHI, helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding (.2) Potri.012G097300 [exp] 130 / 7e-30 AT1G20960 3440 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Potri.015G095500 [exp] 127 / 7e-29 AT1G20960 3326 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Potri.015G056501 [exp] 120 / 1e-26 AT5G61140 3496 / 0.0 U5 small nuclear ribonucleoprotein helicase (.1.2) Potri.004G228700 [exp] 106 / 1e-22 AT1G59760 1581 / 0.0 homolog of yeast MTR4, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Potri.001G348200 [exp] 106 / 2e-22 AT3G27730 1542 / 0.0 ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) Potri.006G078000 [exp] 98 / 6e-20 AT2G06990 1634 / 0.0 hua enhancer 2, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Potri.018G146001 [exp] 96 / 1e-19 AT2G06990 972 / 0.0 hua enhancer 2, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Potri.009G041200 [exp] 91 / 1e-17 AT3G46960 1988 / 0.0 RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Potri.010G038500 [exp] 80 / 2e-14 AT1G70070 1502 / 0.0 PIGMENT DEFECTIVE 317, INCREASED SIZE EXCLUSION LIMIT 2, EMBRYO DEFECTIVE 25, DEAD/DEAH box helicase, putative (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00271 [flax] [poplar] Helicase_C Helicase conserved C-terminal domain CL0023 [flax] [poplar] PF00476 [flax] [poplar] DNA_pol_A DNA polymerase family A CL0023 [flax] [poplar] P-loop_NTPase PF00270 [flax] [poplar] DEAD DEAD/DEAH box helicase
Representative CDS sequence Show only first row Show all	>Lus10022115 pacid=23146488 polypeptide=Lus10022115 locus=Lus10022115.g ID=Lus10022115.BGIv1.0 annot-version=v1.0 ATGACGTCTGATTCTCCAAAGACACAGATTAACCAGTTTTATGCTTCAAAGAAGAGAAAACTCTCTTCGCCTGCACTGAAGGTGGGTAGGGCTGAGAAAG GTGCTAGACTTTCTGCAGAAGGATCCCCGATTTCAAAAGGAACTTTACCCATTTATTTGGTGGGTTCAAAAGAGCAAGATCATGTCATCAAGGCTGTTTC TGAAGATCGAGGTCCGAAGGGTGGAGAAGATTCTACTCAAAGACAACTCTTATCAGAGGTCAACAGGTTTTCGAAACAAGACAACAAGGACTTGTTTTCT TCTGTTCGGCCTTCAAAAGGAGATACTACAAGGAAGGAAACTTGTCAGGGTTCTTCTAATGTCGGAAATGTTGCAATTGGAAGTGCTTTCAAAGGTTGCT CGGTTTCAGGTGCCCATGCAGAAAATTTGGAACTTAAACAGTTTGCAACTGACTTTTTGTCTTTGTATTGTAGTGAACTTCAGTCAACTGCAACCTCGCC GTCCAAAACAAATTTGACTGATAATGAGATACATTCCAATCATTTGTCAGAGGATGGTAAGGATAGAGTGCTGAAGAAGCGGTTATACATACCTAATCAG TTGCATTCAGGGCCTCTTGTTGCTTGCTCTACTATGAACAAGACAGAAGATATGCAGTCATTTACTCCTGAGAATAAAACATACATTGTTGGTGCTTCAG AACAGCATCCGTCAGGCTTGAAGAAATGTGACAAAAAGTCGAAGTTGACTGTGAACTTGACTGACTGCTGTACACCAGGGCCACCTAGTGTGAAAGCACA TCTGCATGAAACCCCTAAGTCAGCACGTGGCAGTTCAATGTTCTCCCCAGGGGAAGCTTTCTGGTGTGAAGCAATTCAAGTTGCTGATGGTATATTTGCC GATACTGAAAATGCTCTTACTATAGTCAGTATGAATGATGGACACAATGGAGAAAATCAAATGGAAGTCTTGTATGAAGCTGAGAGTAGAAGTCAGGTTA TGGGCAATGGCAATTACAGGGAGTCAGTTATGAGGAATCACACCAAAAGTTCTGCTGATGAAGTGTCTCCGCTGCCTGTGAAACATCTTAACTTTTTGTT GGATGAAAAAGCCTCGAACTCAAATATCCAATGTGGTGCAACTAAAAGTTTAAAAACGAGCAGAGATGGGAAACAATCAGCATCTGAAATGGCTGGTCTG ACACACTCTCGAAAAACTAACGTTCTAAGATCTCTCTGTAAGGCTGGAGCAAACCAGGAGGCTCATGGAGTAAAACAAAATATAGATAGTTCATCGCCCA TTGAGGCTAAAGTTTCCGTGTTTAATAACTCTTGTGTTGCATCTGAAACTCCTTCAAGGTTGGCTTCTTGCAAAGATGGACTTGAGATAACCAACTGGCT TCCTTCAGAAGTATGCTGCATATATAGAAGAAGAGGAATCACAAAACTATATCCTTGGCAGGTGGAATGTCTGCAGGTTGATGGTGTTTTACAGAGAAGA AATCTTGTATATTCTGCATCCACAAGTGCTGGCAAAAGTTTTGTTGCTGAAATTTTGATGTTGCGGCGGGTCATATCGATGGGAAAAATTGCAATACTTG TTCTCCCTTATGTGTCATTATGTGCAGAAAAGGCTGAACATCTTGAAAGCCTTCTAGAACCTCTTGGTAAGCATGTCAGGAGCTTTTATGGGAATCAAGG TGGCGCAACACTTCCCAAAGATACTTCTGTAGCTGTCTGCACGATAGAAAAAGCAAACTTTTTAATCAACAGATTGCTGGAAGAGGGCCGTCTATTGGAA ATTGGAATTATTGTCATAGACGAGCTTCACATGGTTGGAGATCAAAGTAGGGGTTATCTTCTAGAACTTATGCTGACAAAGCTCCGGTATGCAACGGGTG AGGGCCAGTCAGAATCCAGCAGTGGAGAAAGCTCCGGCACAAGCAGTAAGGCTGATCCTACTAATGGCTTGCAAATTGTGGGGATGAGTGCTACCATGCC GAATGTTGGAGCTGTTGCTGATTGGCTGCAAGCAGCATTATACCAGACAGATTTTCGGCCAGTTCCACTCGAGGAATATATCAAAGTTGGTAACACCATC TATGACAAAAAATTGAATATCATCAGAACAATTCCAAAGGTAGCAGAACGAGGTGGTAAAGATCCAGATCACATAGTTGCACTCTGTGATGAGGTTGTTC AAGAAGGGCACTCAGTGCTTATATTTTGCTCTAGTCGCAAAGGATGTGAATCAACTGCAAGACATGTTGCAAAGTTCCTGAAAGGATTCTCCGTTAATGT TCAGAATGATAGCAACTTTGTGGACATTTTTTCAGCTGTTGATGCATTGCGGAGGTGTCCTGTGGGATTGGATCCAGTATTAGAAGAGACTCTTCCTTGT GGTGTTGCATATCACCATGCTGGGTTGACAGCTGAGGAGAGAGAAATTATTGAGACCTGTTATCGCAGGGGCCTCGTTCGAGTCTTAACTGCCACATCTA CGTTGGCCGCTGGGGTAAATCTACCCGCTAGGAGGGTCATTTTTCGTCAACCCAGGGTTGGGCGTGATTTTCTTGATGGGACAAGATATAAACAGATGGC TGGTCGGGCTGGTCGTACTGGAATAGATACTAAAGGGGAAAGTGTACTAATTTGCAAAGCAGACGAGCTGAAGAGAATCATGGAACTGCTGAATGAAAGC TGTCCACCCTTGCAGTCATGTCTATCAGAAGATAAAAATGGCATGACACATGCAATTTTAGAAGTTGTTGCGGGTGGCATTGTACAATCTGCCAATGACA TTCATCGATATGTTAAGTGCACTCTTCTTAATGCTACTAAACATTTTAACGATGTGGTGAAATCAGCGCAGGATTCACTTCGGTGGCTATGCCACAAGAA GTTTATTGAGTGGAATGAAGATACAAAGCTATATAGCAGCACGCCCCTTGGACGTGCAGCTTTTGGAAGTTCTCTCTGTCCTGAAGAATCACTTATAGTA CTTGATGATCTCTCCAGGGCAAGAGAAGCATTTGTGCTTGCATCGGATTTGCATTTAGTGTACTTAGTGACACCTACAAATGTAGATGTTGAGCCAGACT GGGAAGTGTATTATGGAAGGTTTGTGGAACTATCTGCTATCGATCAGTCTGTGGGAAACCGAGTTGGGGTTATGGAGCCATTTTTGATGCGGATGGCTCA TGGGGCACCCATGAGACATTCAAAAAAGACTACAATTAATACAGCAGCATTACGAGGAAAGCTTGAAAAACATGCTGGGCTTATTGGCAACAGTAGCCTG TCAGACGAGCAAGCACTTAGAGTTTGCAAACGGTTTTTTGTTGCTCTCTTATTGTCAAGATTAGTGCAGGAATCACCTGTTGCCGAGGTCTGTGAAGCCT TCAAGGTAGCTAGAGGCACAATCCAAGCCTTACAAGAAAATTCTGGAAGGTTTGCATCCATGGTCACTTTGTTTTGCGAAAGACTAGGTTGGCATGATCT GGAGGGCCTGGTGTCCAAGTTCCAGAACCGTGTTTCTTTTGGGGTGAGAGCTGAGATTGTGGAACTTACTACTATTCCACATGTCAAGGGTTCTCGTGCT AGAGCACTTTATAAAGCTGGATTGCGTACACCTACTGCTATTGCTGAAGCGTCAATTCCTGATATTGTCAAAGCACTGTTTGAGACTTCAACATGGTCTA CAGTACAAGAATGCTCAGCACAAAGACGGTTTCAGTTTGGAGTTGCGAAGAAAATCAATAATGGTGCCCGGAGAATTGTTCTTGAAAAAGCTGAGGAGGC AAGGATGGCAGCTTTCTCAGCTTTCCAGTCACTGGGATTGAGCGTTCCTCATCTTTCTCGACCTTTACTATATGATGATAACCATAATCCTATTGAGAAT GGAGCTGTAAGGGATGAGAAAACTGTTATGACTTCTCCTGCAGAACCGGCACGGCTTGTTTCTCCTAAGCTGGCAGGGGTAGCTGGTAAGACCTCTGTTA AAGTTGGATCAAAAGGGGAGGGACACGAGTCAGCAAAAGCACGTGATTTTGGTCCAGCATGCCTTGGAGGAGTAACCTTAAATAACCTGCTGCAGTCTAC AGACATAGTAGATCCAACAATACTAGTTAGAAGCTCAATCGTCAAATCCAATCCTGATTGTAGTGCTGATAGGATTAGGAACATAAGTGCGGATGCAGTT GTAGTTGCTCAATTAGGAAGAAACGGTGACCTAATGCAAGGCCATGAGCATATTAGCCATGAATCAGAAGAACAAGATGATCGAAAATCTTTCAGCAGTA AAGAGAAGTTGAGTGTTAAGGGCCCTATAAATGCTAGTAGTGTTTCTGGTGGATTTGATTCTTTCTTGGATATCTGGGATGCTACTCAGGAGTTTTACTT TGATATCCACTATACCAAACCCACGAGAATGAATTCTGCTGCCACTTTTGATATACATGGTATTGCCATCTGCTGGGAAAAGTCTCCTGTGTACTATATC AAACTTCCCAAGGATCTATTGCAGCATGAAGATAAGAAAATCAATGACCCACAATTAGACGAAGTCAGTGAGATGGGTAGCCATATACCTACCAAGAATA TGTTGGAAGCAGTTCAGCAGCGATGGAATCGAATTGGTGAAATCATGAGGAAAAGGAATGTCAAAAAATTTACATGGAACTTAAAAGTTCAGATGCAGGC CCTCAAGAAGGCTTCAGTCTCTGCTCGTAGATTTGGCTCGAAGTGTATGCCTACCGAAGATTTGGGGCTCCAAATTTCAGAGACCTCAGACATATTGCTT CCGGCTGTTAATATCAGAGAGGGAGTCGACTTGTGTGTTGTGGCATGGATTCTTTGGCCTGATGAAGAGAGAAGCTCCAATCCTAGTCTGGAAAAGGAAG TAAAGAAAAGGTTGTCGAGCGAGGCCATTGCAGCTGCTAATTTGATTAGCAGGTGGAAGAATCAAATGCGCGGAGTCGCACACAATGGTTGTTGCCGTCG TGTGGCTCAAATCCGTGCCTTATCTTCCGTTCTTTGGAAACTACTGATAACTGAAGGGCTTCTTGAACCACTTAATTCCATTGAGAGTCCATTGGTAAAT GTTCTAGCAGAGATGGAGATGTGGGGAATAGGTGTTGACATGGAGGGCTGCATTCAAGCACGTACTCTTCTCGGGAAAAAAATTAGGCAACTTGAGAAGG AGGCTTATGAACTTGCTGGTGTGAAGTTTTCGCTAAATACACCAGCAGACATTGCACATATTCTCTATTCGCATCTGAAGCTGCCATTACCAGAAAGACT TATTAGGGGGAAGCAACATCCAAGCACTGACAAGCACTGCTTAGACTGGTTAAGACATGAACATCCCATAATACCTATCATCAGAGAGCACCGAACCTTG GCAAAGTTGCTGAACTCAACACTGGGTTCGATATGCTCACTGGGTAAGCTATCTATCAGCTCGCAGAAATACACCATCCATGGCCGTTGGCTTCAAACAT CGACAGCAACTGGAAGACTTTCAATGGAAGAGCCCAATCTTCAGTGCGTTGAGCATATGGTTGACTTCAAACTGAGGACAGATGAAAGTGGGAGCGAGAC TGCTTTTGGTCATTACAGAATAAATGCCCGTGATTTCTTTGTTCCTACGCAGGATAACTGGGTACTTCTAACAGCAGATTATTCCCAAATAGAGCTCCGG TTAATGGCACACTTTTCCATGGATAATTCATTGATTGAACTCCTTAGCGAACCTCAGAGTGACGTTTTTACAACGATAGCTGCTAAATGGACTGGGAAGT CGGAAGATTCTGTTGGCTTAGATGAGCGAGATCATACAAAAAGGCTAGTCTATGGAATTCTCTATGGTATGGGTGCTAACAGTCTAGCTCAGCAACTGGA TTGTAGCCCAGATGAAGCTGCAGAGAAGATTAGAAGCTTCAAACACAGCTTTCCGGGAGTTGCGTCCTGGCTCAAGGAAACAGTTTCTTCTTGCCGTGAA AAGGGGTGCCTTATTTTTCATATCTGTGTTCTATGCCTATTTGGGTATGTGGAAACTCTCAAGGGAAGAAAACGCTTCTTGTCCAAAATAAAATTGGGGA ACAGTGAAGAAAAAGCCAAGGCTCAGAGACAAGCAGTTAATTCAATTTGTCAGGGATCAGCTGCTGACATAATAAAGATAGCAATGATGACCCTACACTC AGCAATTTTTGAAGAAACCGACAAGACAGATTCTGATTCTCCCCGTCTGAATGGGTTTTATATGCTGAAAGGACGGTGTCGTATTCTTTTGCAAGTACAT GATGAATTGGTGTTGGAAGCTGATCCTTCTGTGATTAAAGAAGCTGCTTCATTATTACAAATGAGCATGGAAAATGCTGTGTTGCTTCGTGTTCCTCTGC TCGTTAAACTGAGCGTCGGGCCAACATGGGGTTCTATGGAGCCTTTCAAAGCTGGAAATTATGCAAATGGTGTTGAAGTTACCGGATCTTGA
AA sequence Show only first row Show all	>Lus10022115 pacid=23146488 polypeptide=Lus10022115 locus=Lus10022115.g ID=Lus10022115.BGIv1.0 annot-version=v1.0 MTSDSPKTQINQFYASKKRKLSSPALKVGRAEKGARLSAEGSPISKGTLPIYLVGSKEQDHVIKAVSEDRGPKGGEDSTQRQLLSEVNRFSKQDNKDLFS SVRPSKGDTTRKETCQGSSNVGNVAIGSAFKGCSVSGAHAENLELKQFATDFLSLYCSELQSTATSPSKTNLTDNEIHSNHLSEDGKDRVLKKRLYIPNQ LHSGPLVACSTMNKTEDMQSFTPENKTYIVGASEQHPSGLKKCDKKSKLTVNLTDCCTPGPPSVKAHLHETPKSARGSSMFSPGEAFWCEAIQVADGIFA DTENALTIVSMNDGHNGENQMEVLYEAESRSQVMGNGNYRESVMRNHTKSSADEVSPLPVKHLNFLLDEKASNSNIQCGATKSLKTSRDGKQSASEMAGL THSRKTNVLRSLCKAGANQEAHGVKQNIDSSSPIEAKVSVFNNSCVASETPSRLASCKDGLEITNWLPSEVCCIYRRRGITKLYPWQVECLQVDGVLQRR NLVYSASTSAGKSFVAEILMLRRVISMGKIAILVLPYVSLCAEKAEHLESLLEPLGKHVRSFYGNQGGATLPKDTSVAVCTIEKANFLINRLLEEGRLLE IGIIVIDELHMVGDQSRGYLLELMLTKLRYATGEGQSESSSGESSGTSSKADPTNGLQIVGMSATMPNVGAVADWLQAALYQTDFRPVPLEEYIKVGNTI YDKKLNIIRTIPKVAERGGKDPDHIVALCDEVVQEGHSVLIFCSSRKGCESTARHVAKFLKGFSVNVQNDSNFVDIFSAVDALRRCPVGLDPVLEETLPC GVAYHHAGLTAEEREIIETCYRRGLVRVLTATSTLAAGVNLPARRVIFRQPRVGRDFLDGTRYKQMAGRAGRTGIDTKGESVLICKADELKRIMELLNES CPPLQSCLSEDKNGMTHAILEVVAGGIVQSANDIHRYVKCTLLNATKHFNDVVKSAQDSLRWLCHKKFIEWNEDTKLYSSTPLGRAAFGSSLCPEESLIV LDDLSRAREAFVLASDLHLVYLVTPTNVDVEPDWEVYYGRFVELSAIDQSVGNRVGVMEPFLMRMAHGAPMRHSKKTTINTAALRGKLEKHAGLIGNSSL SDEQALRVCKRFFVALLLSRLVQESPVAEVCEAFKVARGTIQALQENSGRFASMVTLFCERLGWHDLEGLVSKFQNRVSFGVRAEIVELTTIPHVKGSRA RALYKAGLRTPTAIAEASIPDIVKALFETSTWSTVQECSAQRRFQFGVAKKINNGARRIVLEKAEEARMAAFSAFQSLGLSVPHLSRPLLYDDNHNPIEN GAVRDEKTVMTSPAEPARLVSPKLAGVAGKTSVKVGSKGEGHESAKARDFGPACLGGVTLNNLLQSTDIVDPTILVRSSIVKSNPDCSADRIRNISADAV VVAQLGRNGDLMQGHEHISHESEEQDDRKSFSSKEKLSVKGPINASSVSGGFDSFLDIWDATQEFYFDIHYTKPTRMNSAATFDIHGIAICWEKSPVYYI KLPKDLLQHEDKKINDPQLDEVSEMGSHIPTKNMLEAVQQRWNRIGEIMRKRNVKKFTWNLKVQMQALKKASVSARRFGSKCMPTEDLGLQISETSDILL PAVNIREGVDLCVVAWILWPDEERSSNPSLEKEVKKRLSSEAIAAANLISRWKNQMRGVAHNGCCRRVAQIRALSSVLWKLLITEGLLEPLNSIESPLVN VLAEMEMWGIGVDMEGCIQARTLLGKKIRQLEKEAYELAGVKFSLNTPADIAHILYSHLKLPLPERLIRGKQHPSTDKHCLDWLRHEHPIIPIIREHRTL AKLLNSTLGSICSLGKLSISSQKYTIHGRWLQTSTATGRLSMEEPNLQCVEHMVDFKLRTDESGSETAFGHYRINARDFFVPTQDNWVLLTADYSQIELR LMAHFSMDNSLIELLSEPQSDVFTTIAAKWTGKSEDSVGLDERDHTKRLVYGILYGMGANSLAQQLDCSPDEAAEKIRSFKHSFPGVASWLKETVSSCRE KGCLIFHICVLCLFGYVETLKGRKRFLSKIKLGNSEEKAKAQRQAVNSICQGSAADIIKIAMMTLHSAIFEETDKTDSDSPRLNGFYMLKGRCRILLQVH DELVLEADPSVIKEAASLLQMSMENAVLLRVPLLVKLSVGPTWGSMEPFKAGNYANGVEVTGS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G32700		TEB	TEBICHI, helicases;ATP-depende...		Lus10022115 [exp]	0	1
AT2G41520		TPR15	tetratricopeptide repeat 15, H...		Lus10031042 [exp]	1.4	0.9599
AT5G47690			binding (.1.2.3)		Lus10039082 [exp]	1.7	0.9471
AT2G02560		TIP120, HVE, ET...	HEMIVENATA, CULLIN-ASSOCIATED ...		Lus10026261 [exp]	2.0	0.9425
AT5G51200		EMB3142	EMBRYO DEFECTIVE 3142, Protein...		Lus10005726 [exp]	5.5	0.9521
AT1G58060			RNA helicase family protein (....		Lus10020816 [exp]	5.9	0.9367
AT1G27590			unknown protein		Lus10007229 [exp]	8.1	0.9317
AT4G38760			Protein of unknown function (D...		Lus10012168 [exp]	9.2	0.9348
AT4G40000			S-adenosyl-L-methionine-depend...		Lus10026840 [exp]	9.5	0.9344
AT1G27590			unknown protein		Lus10028228 [exp]	9.8	0.9305
AT1G79950			RAD3-like DNA-binding helicase...		Lus10011460 [exp]	9.9	0.9154

Compare expression of checked genes

Lus10022115 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.