Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25737 126 / 5e-34 Sulfite exporter TauE/SafE family protein (.1) AT2G36630 76 / 7e-16 Sulfite exporter TauE/SafE family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011683 [exp] 194 / 5e-60 AT2G25737 444 / 9e-154 Sulfite exporter TauE/SafE family protein (.1) Lus10011682 [exp] 119 / 2e-31 AT2G25737 632 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10026025 [exp] 112 / 1e-28 AT2G25737 533 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10014316 [exp] 109 / 9e-28 AT2G25737 536 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10029813 [exp] 76 / 6e-16 AT2G36630 612 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10020733 [exp] 75 / 2e-15 AT2G36630 611 / 0.0 Sulfite exporter TauE/SafE family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G037500 [exp] 152 / 7e-44 AT2G25737 529 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.006G242100 [exp] 132 / 3e-36 AT2G25737 568 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.003G053000 [exp] 129 / 5e-35 AT2G25737 501 / 2e-175 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183400 [exp] 124 / 4e-33 AT2G25737 418 / 5e-143 Sulfite exporter TauE/SafE family protein (.1) Potri.001G182700 [exp] 123 / 9e-33 AT2G25737 428 / 6e-147 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037400 [exp] 122 / 2e-32 AT2G25737 535 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.007G026800 [exp] 117 / 7e-31 AT2G25737 434 / 2e-149 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183300 [exp] 114 / 1e-29 AT2G25737 381 / 2e-128 Sulfite exporter TauE/SafE family protein (.1) Potri.005G124200 [exp] 112 / 8e-29 AT2G25737 453 / 1e-156 Sulfite exporter TauE/SafE family protein (.1) Potri.006G117900 [exp] 88 / 5e-20 AT2G36630 578 / 0.0 Sulfite exporter TauE/SafE family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022134 pacid=23146479 polypeptide=Lus10022134 locus=Lus10022134.g ID=Lus10022134.BGIv1.0 annot-version=v1.0 ATGACAAGTTTCTTCAGTTTTGAAATCATCCGGTGGAAGGAACTTGGACTCGTGACTTTTGTCTGGCTAGCTTACCTCGCCCTTCAGATCTCCAAGAACT ACACTGCGACGTGTTCAACGTACTACTGGGTATTGAACTTGGTACAGATTCCAGTGTCGGGGAGCGTGTTTCTATATCAGACGATTGGGCTGTACAGAGG AACAAAGAAGATTGCATCCAAGGAAGAAGAAGGAATGAAGAATTTGAAAGTGAAGCAGCTAGCTTTGTTCTCCATCAGTGGGTTGTTTGCTGGAATAGTT GGTGGCATGTTGGGGTTAGGTGGAGGCTTTGTCACGGGTCCTCTTTTTCTTGAGCTCGGAATTCCTCCTCAGGCAAAATCACACTACTCCTGCTCTTTCG TGATTCCACCTTTTTCAATAACACCCACTCACAGTACTATATATGCACTGTATCTTGTGGCAGTGTCCATTGTGGCTGTATACATTGGACAGTATTTGAT CAGTGTGGTGGTGGGGTGGTCAGGGAGGGCATCACTCATCATATTTGTACTCTCCTCCACAATCTCTGTTAGTGCAATATCAATAGGTGGAATTGGGATC ACAAGCAACGGCGGCAACATAATCTTAGCGGTGGAAATCTCATGGTGA
AA sequence Show only first row Show all	>Lus10022134 pacid=23146479 polypeptide=Lus10022134 locus=Lus10022134.g ID=Lus10022134.BGIv1.0 annot-version=v1.0 MTSFFSFEIIRWKELGLVTFVWLAYLALQISKNYTATCSTYYWVLNLVQIPVSGSVFLYQTIGLYRGTKKIASKEEEGMKNLKVKQLALFSISGLFAGIV GGMLGLGGGFVTGPLFLELGIPPQAKSHYSCSFVIPPFSITPTHSTIYALYLVAVSIVAVYIGQYLISVVVGWSGRASLIIFVLSSTISVSAISIGGIGI TSNGGNIILAVEISW

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10022134 [exp]	0	1
					Lus10004996 [exp]	1.7	1.0000
					Lus10003285 [exp]	3.5	1.0000
					Lus10000363 [exp]	4.2	1.0000
AT3G27080		TOM20-3	translocase of outer membrane ...		Lus10041558 [exp]	5.5	1.0000
AT3G10340		PAL4	phenylalanine ammonia-lyase 4 ...		Lus10001405 [exp]	6.0	1.0000
AT1G61330			FBD, F-box and Leucine Rich Re...		Lus10006726 [exp]	6.7	1.0000
AT1G20480			AMP-dependent synthetase and l...		Lus10011621 [exp]	7.5	1.0000
AT3G61150	HD	HD-GL2-1, HDG1	HOMEODOMAIN-GLABRA2 1, homeodo...		Lus10003300 [exp]	8.0	1.0000
AT2G37890			Mitochondrial substrate carrie...		Lus10006265 [exp]	8.5	1.0000
					Lus10000977 [exp]	8.9	1.0000

Compare expression of checked genes

Lus10022134 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.