Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25890 86 / 2e-20 Oleosin family protein (.1) AT4G25140 82 / 2e-18 OLE1, OLEO1 oleosin 1 (.1) AT5G51210 65 / 9e-13 OLEO3 oleosin3 (.1) AT5G40420 55 / 8e-09 OLE2, PA23, OLEO2 oleosin 2 (.1) AT3G01570 54 / 2e-08 Oleosin family protein (.1) AT3G27660 50 / 2e-07 OLE3, OLEO4 OLEOSIN 3, oleosin 4 (.1) AT5G07550 49 / 2e-07 ATGRP19, GRP19 glycine-rich protein 19 (.1.2.3) AT3G18570 47 / 2e-06 Oleosin family protein (.1) AT1G48990 46 / 7e-06 Oleosin family protein (.1) AT5G07560 45 / 2e-05 ATGRP20, GRP20 glycine-rich protein 20 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031387 [exp] 84 / 1e-19 AT4G25140 164 / 1e-52 oleosin 1 (.1) Lus10027161 [exp] 81 / 3e-18 AT4G25140 154 / 3e-48 oleosin 1 (.1) Lus10039683 [exp] 80 / 5e-18 AT4G25140 159 / 2e-50 oleosin 1 (.1) Lus10028822 [exp] 78 / 1e-17 AT4G25140 146 / 3e-46 oleosin 1 (.1) Lus10010943 [exp] 82 / 3e-17 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10017460 [exp] 78 / 3e-17 AT4G25140 136 / 9e-42 oleosin 1 (.1) Lus10042957 [exp] 67 / 5e-13 AT3G18570 139 / 2e-42 Oleosin family protein (.1) Lus10032461 [exp] 67 / 5e-13 AT3G18570 142 / 1e-43 Oleosin family protein (.1) Lus10017992 [exp] 55 / 9e-09 AT3G18570 136 / 4e-41 Oleosin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G080000 [exp] 86 / 2e-20 AT4G25140 108 / 1e-30 oleosin 1 (.1) Potri.003G150600 [exp] 85 / 3e-20 AT4G25140 124 / 3e-37 oleosin 1 (.1) Potri.018G057800 [exp] 83 / 3e-19 AT2G25890 91 / 5e-24 Oleosin family protein (.1) Potri.006G234900 [exp] 80 / 5e-18 AT2G25890 113 / 1e-32 Oleosin family protein (.1) Potri.012G059400 [exp] 60 / 1e-10 AT3G18570 113 / 4e-32 Oleosin family protein (.1) Potri.T125308 [exp] 49 / 4e-07 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.015G081901 [exp] 49 / 4e-07 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.001G345800 [exp] 45 / 7e-06 AT3G01570 140 / 6e-43 Oleosin family protein (.1) Potri.017G071800 [exp] 45 / 7e-06 AT3G01570 130 / 4e-39 Oleosin family protein (.1) Potri.012G083400 [exp] 45 / 1e-05 AT5G40420 97 / 2e-25 oleosin 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01277 [flax] [poplar] Oleosin Oleosin
Representative CDS sequence Show only first row Show all	>Lus10022141 pacid=23146463 polypeptide=Lus10022141 locus=Lus10022141.g ID=Lus10022141.BGIv1.0 annot-version=v1.0 ATGTTACCTAACGTTGAGCTAATAGTGGCGGCGTTGATCCATGCCGTCCTCATAGCCTCTGTCCTAATGGCAACAGTCTTTATCGTCCTCACCGCCCTTT CATTGGCTCTCCTCATAATGCTCTTTTCCATCCCAATCCTCGACCTCCATGATGCCGTTTCGTTGTTGTCCCGCAGCCGCGTCGTGAAGTCCCTTGAAGC AAACTTCCAACTGGGTTTTGTCCTTGTTCTTTATTTCTTCATCTCCCACGCCGCCATCCCACTCCTCCTCCACCACTCTGCCTCTACTACTACTACTCTA CTCTGCGGTCGCAAGTTTGATATTGCCCGCTCCAATGAGTTGGACCGTCGCCGTCGAATCAGCCAGGATGGGTTGTCGTCCTCGTCGTCGCGGAGATGGA TATCGACCACGTCCAAGCTTCACACCGCTTCACTCTCCACCATATCCCCCCATAGGCCACTCCGCCACCGCCGCTCATCCTCCTCCTCCAGGCGGCGGAT GGTGGTCAAGCTTACCACAGCCATCACCATATGCACGCTTTCCACGCTTCTTTTCGCCCTCACGCTGACAGCCACCGTCATGACTCTAGTCATAGCAACT CCTCTCATAGTCCTGTTCAGCCCCGTGCTGCTCCCGGCCGCTTTGGCTACCGTGTTCGTCACTGCAGGGTTCTTTGTATCCGGCGGCTGCGGGATTGCCG CGGCGGCTACGCTGAGCTGGATGTACAGTTACGTGGCAGGGAAGCAGCCCCCGGGTTCTGAGGAGTTGGAGTACGGGAGAATGAAGATAGTGGGCATGGC TAAGCAAGTGAAGGATATGGCTATCTATTATATTACTGACCATCATCATCATCACCATACTAATGAATATGAGTATAGCAGCAGCAGCACCAGCAGCAAA GATGTCGGTTTAGATGATGAGGCCAATCACGTGCCATATGGAACACAATGGTCATAA
AA sequence Show only first row Show all	>Lus10022141 pacid=23146463 polypeptide=Lus10022141 locus=Lus10022141.g ID=Lus10022141.BGIv1.0 annot-version=v1.0 MLPNVELIVAALIHAVLIASVLMATVFIVLTALSLALLIMLFSIPILDLHDAVSLLSRSRVVKSLEANFQLGFVLVLYFFISHAAIPLLLHHSASTTTTL LCGRKFDIARSNELDRRRRISQDGLSSSSSRRWISTTSKLHTASLSTISPHRPLRHRRSSSSSRRRMVVKLTTAITICTLSTLLFALTLTATVMTLVIAT PLIVLFSPVLLPAALATVFVTAGFFVSGGCGIAAAATLSWMYSYVAGKQPPGSEELEYGRMKIVGMAKQVKDMAIYYITDHHHHHHTNEYEYSSSSTSSK DVGLDDEANHVPYGTQWS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G25140		OLE1, OLEO1	oleosin 1 (.1)		Lus10022141 [exp]	0	1
AT3G26350			unknown protein		Lus10006464 [exp]	1.4	0.9501
AT3G20650			mRNA capping enzyme family pro...		Lus10003803 [exp]	4.2	0.9383
AT1G23530			unknown protein		Lus10013015 [exp]	4.9	0.9157
AT5G19875			unknown protein		Lus10034527 [exp]	7.7	0.9018
AT1G14730			Cytochrome b561/ferric reducta...		Lus10034427 [exp]	8.5	0.9096
AT4G01410			Late embryogenesis abundant (L...		Lus10030193 [exp]	9.9	0.9121
AT5G04890		RTM2	RESTRICTED TEV MOVEMENT 2, HSP...		Lus10028874 [exp]	10.5	0.9183
AT3G62860			alpha/beta-Hydrolases superfam...		Lus10007877 [exp]	15.6	0.8507
AT1G23530			unknown protein		Lus10030608 [exp]	17.9	0.9137
					Lus10009581 [exp]	18.3	0.8894

Compare expression of checked genes

Lus10022141 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.