Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G13080 208 / 2e-62 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) AT3G13100 182 / 3e-53 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1) AT3G13090 182 / 4e-53 ATMRP8, ATABCC6 ATP-binding cassette C6, multidrug resistance-associated protein 8 (.1) AT3G60970 159 / 2e-45 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1) AT3G60160 159 / 2e-45 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) AT1G04120 124 / 5e-33 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) AT3G21250 112 / 1e-28 ATMRP6, ABCC8 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) AT3G62700 111 / 2e-28 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) AT3G59140 109 / 6e-28 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) AT2G47800 103 / 8e-26 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013201 [exp] 263 / 1e-81 AT3G13080 1498 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Lus10030716 [exp] 251 / 6e-79 AT3G13080 1256 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Lus10018027 [exp] 157 / 2e-44 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10042023 [exp] 156 / 4e-44 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10022858 [exp] 136 / 4e-37 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10024965 [exp] 133 / 4e-36 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10027567 [exp] 120 / 1e-31 AT3G59140 2001 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10022808 [exp] 119 / 1e-31 AT3G60160 504 / 7e-169 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10039320 [exp] 120 / 2e-31 AT3G59140 1991 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G362300 [exp] 224 / 5e-68 AT3G13080 2008 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.001G362200 [exp] 208 / 2e-62 AT3G13080 1952 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197200 [exp] 201 / 5e-60 AT3G13080 1832 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124606 [exp] 201 / 5e-60 AT3G13080 1830 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124506 [exp] 200 / 2e-59 AT3G13080 1847 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197101 [exp] 200 / 2e-59 AT3G13080 1862 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T125806 [exp] 200 / 2e-59 AT3G13080 1826 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G198401 [exp] 200 / 2e-59 AT3G13080 1827 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124406 [exp] 196 / 5e-58 AT3G13080 1847 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197100 [exp] 193 / 4e-57 AT3G13080 1842 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022243 pacid=23139368 polypeptide=Lus10022243 locus=Lus10022243.g ID=Lus10022243.BGIv1.0 annot-version=v1.0 ATGGAACTTACAGATGCACATTCCCGCCCCAAGTTTCACACCGCTGGTGCAATGGAATGGCTTTGCGTCCGCCTCGACTTTTTTTCTTCAGTTACATTAG CCTTCTCTTTGTTTTTCTTAATCTCTGTCCCTGGGATAAATCCATTTCTTGCTGGTTTAACGGTGACATATGGGCTGAATCTAAACATGATCCAAGCTTG GGTGATATGGAATCTTTGTAATGTGGAGAACAAAATCATATCAGTGGAGAGAACTCTTCAGTATATATCTATTCCCAGTGAGCCTCCTCTTGTTATACAA GAGACCAGACAGGATCTTTCTTGGCCGTCACTTGGAAAAGTTGATATTGATGGCTTGGAGGTTCGATATGCCCCGCACTTGCCACTTGTGCTGAGAGGTC TTACCTGCACAATAACATCTGTTCTTGACAGCGACATGGTTCTTCTGCTGAGTCACGCTCTTATTGAAGAATATGATAGTCCAGCAAGATTGTTGGAGAA CAAGTCATCCTCGTTTGCACAACTTGTAGCTGGGTACACTGAGAGATCGAAAGAACAGTTCTGA
AA sequence Show only first row Show all	>Lus10022243 pacid=23139368 polypeptide=Lus10022243 locus=Lus10022243.g ID=Lus10022243.BGIv1.0 annot-version=v1.0 MELTDAHSRPKFHTAGAMEWLCVRLDFFSSVTLAFSLFFLISVPGINPFLAGLTVTYGLNLNMIQAWVIWNLCNVENKIISVERTLQYISIPSEPPLVIQ ETRQDLSWPSLGKVDIDGLEVRYAPHLPLVLRGLTCTITSVLDSDMVLLLSHALIEEYDSPARLLENKSSSFAQLVAGYTERSKEQF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G13080		EST2, ATMRP3, A...	MULTIDRUG RESISTANCE PROTEIN 3...		Lus10022243 [exp]	0	1
AT5G57015		CKL12	casein kinase I-like 12 (.1)		Lus10008472 [exp]	2.2	0.6584
AT3G04560			unknown protein		Lus10035363 [exp]	9.5	0.6075
AT4G10850		SWEET7, AtSWEET...	Nodulin MtN3 family protein (....		Lus10003200 [exp]	19.7	0.5596
AT3G62930			Thioredoxin superfamily protei...		Lus10029440 [exp]	26.8	0.5482
AT5G59380		MBD6, ATMBD6	methyl-CPG-binding domain 6 (....		Lus10029564 [exp]	32.8	0.5357
					Lus10026426 [exp]	47.5	0.5100
AT3G49030			FBD, F-box and Leucine Rich Re...		Lus10029424 [exp]	49.4	0.4724
AT5G05390		LAC12	laccase 12 (.1)		Lus10040957 [exp]	52.0	0.5075
AT3G47040			Glycosyl hydrolase family prot...		Lus10000391 [exp]	52.6	0.4974
					Lus10006584 [exp]	65.4	0.4794

Compare expression of checked genes

Lus10022243 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.