Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G55340 179 / 1e-55 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34520 176 / 1e-54 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55350 176 / 1e-54 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55330 174 / 1e-53 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34490 173 / 2e-53 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT3G51970 167 / 4e-51 ATASAT1, ASAT1, ATSAT1 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) AT1G34500 166 / 2e-50 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55360 165 / 3e-50 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55320 164 / 4e-50 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55380 157 / 3e-47 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039576 [exp] 192 / 7e-61 AT3G51970 329 / 7e-112 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Lus10003655 [exp] 183 / 1e-59 AT5G55380 126 / 5e-36 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G055100 [exp] 202 / 3e-64 AT3G51970 330 / 8e-112 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.009G054900 [exp] 196 / 6e-62 AT3G51970 280 / 1e-92 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.016G014700 [exp] 193 / 1e-60 AT5G55340 242 / 1e-77 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.001G106800 [exp] 187 / 2e-58 AT3G51970 255 / 1e-82 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.016G014600 [exp] 185 / 2e-57 AT3G51970 299 / 1e-99 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.009G055000 [exp] 184 / 2e-57 AT3G51970 314 / 7e-106 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.001G260700 [exp] 184 / 3e-57 AT3G51970 268 / 2e-87 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.008G145700 [exp] 182 / 7e-57 AT5G55340 264 / 1e-86 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.006G009800 [exp] 182 / 1e-56 AT3G51970 244 / 3e-78 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.006G009600 [exp] 119 / 5e-33 AT5G55360 145 / 3e-41 MBOAT (membrane bound O-acyl transferase) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0517 [flax] [poplar] MBOAT-like PF03062 [flax] [poplar] MBOAT MBOAT, membrane-bound O-acyltransferase family
Representative CDS sequence Show only first row Show all	>Lus10022293 pacid=23139455 polypeptide=Lus10022293 locus=Lus10022293.g ID=Lus10022293.BGIv1.0 annot-version=v1.0 ATGGTGACTTTCTGCGCGGTCCCGGCTCGAACCCTTTTTGGGTTCGAGCTGGAGCCGCAATTCGACGAGCCATATCTCGCCACGTCGCTTCAGGATTTTT GGGGGCGGAGGTGGAATCTGATGGTCACCAAGATATTGCGTCCTACCGTCTACGTTCCGATCAGAGCAGTGGCGGGGCGTGTAGTGGGCTGGCAGTGGGC CTCGCTGCCGGCGGTGGTGGCCACTTTCGTGGTGTCGGGGTTAATGCACGAATTGATGTATTACTATATGAATAGGGTGGGGCCCACGTGGGAGGTGACG TGGTTTTTCGTGATTCACGGAGTTTGCGTGGCTGTGGAAGTCGGGCTTAAGAAGAAATTTAAGGAGGAAGCATTTCGGTTGCCGTCAGTGGTGTCGGTGC CGTTGACGGTTGGGTTTGTTGGGGTGACAGGGTTTTGGCTTTTCTTCCCGCAGATTTTGAGGAATGGTGCGGTTGAACGAGTCATTGCGGAGTATTCGGC GTTTGTTGGTTTTTTCTCAAGTAGATTCACCAATTTTGTAATTTCCTTCTCTTCATGA
AA sequence Show only first row Show all	>Lus10022293 pacid=23139455 polypeptide=Lus10022293 locus=Lus10022293.g ID=Lus10022293.BGIv1.0 annot-version=v1.0 MVTFCAVPARTLFGFELEPQFDEPYLATSLQDFWGRRWNLMVTKILRPTVYVPIRAVAGRVVGWQWASLPAVVATFVVSGLMHELMYYYMNRVGPTWEVT WFFVIHGVCVAVEVGLKKKFKEEAFRLPSVVSVPLTVGFVGVTGFWLFFPQILRNGAVERVIAEYSAFVGFFSSRFTNFVISFSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G55340			MBOAT (membrane bound O-acyl t...		Lus10022293 [exp]	0	1
AT1G36370		SHM7	serine hydroxymethyltransferas...		Lus10019942 [exp]	1.4	0.8733
AT2G37110			PLAC8 family protein (.1)		Lus10026492 [exp]	1.4	0.9178
					Lus10018015 [exp]	2.4	0.8723
AT5G56750		NDL1	N-MYC downregulated-like 1 (.1...		Lus10020241 [exp]	3.2	0.8426
AT1G71940			SNARE associated Golgi protein...		Lus10014818 [exp]	8.0	0.8247
AT3G53720		ATCHX20	cation/H+ exchanger 20, cation...		Lus10024414 [exp]	9.5	0.8403
AT1G36370		SHM7	serine hydroxymethyltransferas...		Lus10015471 [exp]	10.2	0.8302
AT5G10530			Concanavalin A-like lectin pro...		Lus10016833 [exp]	12.0	0.8064
AT2G38360		PRA1.B4	prenylated RAB acceptor 1.B4 (...		Lus10002853 [exp]	12.3	0.8387
AT3G02360			6-phosphogluconate dehydrogena...		Lus10003043 [exp]	12.5	0.8484

Compare expression of checked genes

Lus10022293 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.