Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G11810 322 / 2e-110 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003649 [exp] 564 / 0 AT5G11810 301 / 5e-102 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G230000 [exp] 424 / 2e-150 AT5G11810 333 / 9e-115 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022300 pacid=23139490 polypeptide=Lus10022300 locus=Lus10022300.g ID=Lus10022300.BGIv1.0 annot-version=v1.0 ATGGCTGATATGCCAAGCAGATCACTGGTACTGTACGGTGATGGCCTGGCTCGTTTTGTTGATTCCTCACACACCCATCTCCACTCCCTTGCATCTAAAG CGGCTTGTGGCTTCTTGAGCCTCCCCAACGCCCCTCCCTCAGAAAGTGAGGATGAGAGGATAGTTAGAGAGTTTGCTCTGCTTTTGGATTCTTGGGACAC TGCCAATCAGGGCACGAATAATGCCTCAACTCCAACCATTGCAGATAGGTTCATGGGAATGAAGGCTGCCGTAGTCACAAATAATCCTTCTTTGAAATCT TTTGGTGGGAAGCTTGGCTTCACTGTATTCCCATTCAATGACGTTTCTTGTGAGTCTATGGGTTTGGAGCAAATGAACATGCTCGGGTTTCAACAAGGAA GCGTGTTAGATGTCAGTCAATTTGATATAGTGTTTGTCCACATGGGTTCCGGGGAAGGCAAGGATGGTGATAAAGATAATCGTGGTGCCGAAGATGTTGC GTTTATCAATTCTCTAGTTGATGGGATAATGCATGCAGCCGAACCTGGTTCTGCAATTGGTTCACGTCTACACTTATCACTAGTGATGAGCTATGGATCT GTTTCGGAGGCTGATGGTACTGATACCTCAATTTTCGTTTCGCATGATGAGATGAACCCTGCACTTTCAGGGTTGTTTCCTCGACAAAGTTACACAATGA GAGGGGAAAAACTGCGTCCAGATGTAAGGCACAACTACCCAATGCTAGTTGCTCAATGGCAATATGCTGTAACCCGCATGGACAAGGCCCAGGCGTTTTC TTTTAAAGAATTCAAAGAGCGTGGTGGAAATCTTGCAATACCAGCTGATAGGTTTGTGCATGAAGTAGCATTTAAACTGTGGAAAGCTCCCAAATATGGA GCTTGA
AA sequence Show only first row Show all	>Lus10022300 pacid=23139490 polypeptide=Lus10022300 locus=Lus10022300.g ID=Lus10022300.BGIv1.0 annot-version=v1.0 MADMPSRSLVLYGDGLARFVDSSHTHLHSLASKAACGFLSLPNAPPSESEDERIVREFALLLDSWDTANQGTNNASTPTIADRFMGMKAAVVTNNPSLKS FGGKLGFTVFPFNDVSCESMGLEQMNMLGFQQGSVLDVSQFDIVFVHMGSGEGKDGDKDNRGAEDVAFINSLVDGIMHAAEPGSAIGSRLHLSLVMSYGS VSEADGTDTSIFVSHDEMNPALSGLFPRQSYTMRGEKLRPDVRHNYPMLVAQWQYAVTRMDKAQAFSFKEFKERGGNLAIPADRFVHEVAFKLWKAPKYG A

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G11810			unknown protein		Lus10022300 [exp]	0	1
AT5G64430			Octicosapeptide/Phox/Bem1p fam...		Lus10010752 [exp]	1.7	0.9046
AT1G71780			unknown protein		Lus10016547 [exp]	2.4	0.9005
AT3G22590		PHP, CDC73	PLANT HOMOLOGOUS TO PARAFIBROM...		Lus10041198 [exp]	2.4	0.8889
AT2G43970			RNA-binding protein (.1.2)		Lus10027080 [exp]	4.9	0.8403
AT3G18410			Complex I subunit NDUFS6 (.1.2...		Lus10009027 [exp]	6.3	0.8661
AT5G09620			Octicosapeptide/Phox/Bem1p fam...		Lus10010753 [exp]	7.3	0.8386
AT5G08530		CI51	51 kDa subunit of complex I (....		Lus10015807 [exp]	8.1	0.8454
AT1G16210			unknown protein		Lus10022649 [exp]	8.1	0.8493
AT3G57990			unknown protein		Lus10012013 [exp]	9.9	0.8042
AT5G11260	bZIP	TED5, HY5	REVERSAL OF THE DET PHENOTYPE ...		Lus10002028 [exp]	10.5	0.8346

Compare expression of checked genes

Lus10022300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.