Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G14180 526 / 0 MPL1 Myzus persicae-induced lipase 1 (.1) AT2G15230 277 / 1e-89 ATLIP1 lipase 1 (.1) AT1G18460 84 / 4e-17 alpha/beta-Hydrolases superfamily protein (.1) AT1G73920 78 / 3e-15 alpha/beta-Hydrolases superfamily protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041571 [exp] 813 / 0 AT5G14180 525 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10015159 [exp] 419 / 8e-145 AT5G14180 409 / 2e-141 Myzus persicae-induced lipase 1 (.1) Lus10031523 [exp] 415 / 4e-143 AT5G14180 410 / 1e-141 Myzus persicae-induced lipase 1 (.1) Lus10038401 [exp] 385 / 3e-131 AT5G14180 383 / 4e-131 Myzus persicae-induced lipase 1 (.1) Lus10038378 [exp] 380 / 6e-130 AT5G14180 377 / 2e-129 Myzus persicae-induced lipase 1 (.1) Lus10023171 [exp] 367 / 5e-124 AT5G14180 358 / 3e-121 Myzus persicae-induced lipase 1 (.1) Lus10015158 [exp] 365 / 2e-123 AT5G14180 351 / 2e-118 Myzus persicae-induced lipase 1 (.1) Lus10031524 [exp] 360 / 2e-121 AT5G14180 359 / 2e-121 Myzus persicae-induced lipase 1 (.1) Lus10002808 [exp] 298 / 1e-95 AT2G15230 551 / 0.0 lipase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G332300 [exp] 599 / 0 AT5G14180 533 / 0.0 Myzus persicae-induced lipase 1 (.1) Potri.014G159700 [exp] 431 / 2e-149 AT5G14180 441 / 5e-154 Myzus persicae-induced lipase 1 (.1) Potri.014G159800 [exp] 422 / 6e-146 AT5G14180 422 / 3e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159900 [exp] 421 / 9e-146 AT5G14180 421 / 9e-146 Myzus persicae-induced lipase 1 (.1) Potri.017G069700 [exp] 391 / 3e-134 AT5G14180 374 / 4e-128 Myzus persicae-induced lipase 1 (.1) Potri.009G094900 [exp] 285 / 2e-92 AT2G15230 564 / 0.0 lipase 1 (.1) Potri.012G060600 [exp] 79 / 1e-15 AT1G73920 917 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF00561 [flax] [poplar] Abhydrolase_1 alpha/beta hydrolase fold CL0028 [flax] [poplar] AB_hydrolase PF04083 [flax] [poplar] Abhydro_lipase Partial alpha/beta-hydrolase lipase region
Representative CDS sequence Show only first row Show all	>Lus10022349 pacid=23139354 polypeptide=Lus10022349 locus=Lus10022349.g ID=Lus10022349.BGIv1.0 annot-version=v1.0 ATGGCTAGTCATGGCTTCAACAAGTTGCTTAAAACGAGCTTCAATGTGTTGGTTATAGCCTTGATGGTCATGAGTGATCATGGATCCTCAAGTTTTCTTG GGAGGAAGAGAGGAGGCAGTAGCAGCAGCAGTGTTGTGATTGATCCAGCACCAATTGGGATATGTGCTTCTTCAGTCATTGTTCATGGCTATAAATGCCA GGAGATTGATGTGACAACAAACGATGGGTTCATACTGAATATGCAGAGAATACCAGAAGGCAGAAATGGAGGTGATGGGAGTAGGAGGCAGCCTGTTTTG ATTCAGCATGGAGTTCTTGTGGATGGCTTGACGTGGCTTCTGAATTCACCAGAACAGAACTTACCTATGATCTTGGCTGATAAAGGTTTCGATGTTTGGA TTGCTAACACCAGAGGGACCAGGTTCAGCAGGAGACACACCTCTCTCCAGCCCAACCAACAGGAATTCTGGAATTGGTCATGGGATGAACTGGTGGTGTA TGATCTTCCGGCTGTTGCTGACCATGTCTACAAAGAAACCGGTCAAAAGATGCACTATGTCGGCCATTCTCTGGGGACTTTGATAGGATTGGCATCTTTC TCAGAAGGGCTACTGTCGGATAGGCTGAAATCAGCTGCATTTCTAAGTCCCATTGCCTACTTGAGCCATATGAACACCGTCCTTGGTGCTCTTGCAGCCA GAGCCTTTGTGGGTGAGATGACTACAATGCTTGGTGTTGCTGAGTTCAATCCTAAAGGGAAGCAAGTTTCTGACTTTCTGAATGCCCTTTGTGCCTCTCC TGGACTTGACTGCTATGACCTAATGACTGCCTTCACTGGCAAGAATTGCTGCCTGAATTCTTCAACAATGGCTGTTTTCCTTAAGAATGAGCCTCAATCA ACATCCACCAAGAACCTGGTCCATTTGGCTCAAACTGTCAGGGATGGTGTACTAGCCAAATTCAACTATGGAAAAGCTGACTACAACATTATGCACTATG GAGAATCCAGGCCACCAGTGTACAATCTTTCCAACATCCGTCCTGACCTTCCAATATTCCTCAGCTATGGAGGCCAGGACGCGCTCTCAGACACCCGGGA TGTGGAGCATTTGCTTGACAACTTCAGGTCCCATGACGTGGACAAGCTTACGGTTCAGTATGTGAAGGAGTATGCTCATGCGGATTTCATCATGGGAGTC AATGCCAAAGACATTGATGGTTATGAAGTTGCTGTAGTGCTGTTCTCAAGTTTGACAGACATTAGTGAGATGGCCAATCATCACCCTTGGCTATATAATG AGTCCAATAAGAGGGGAAGAAGTAGGGAGTGA
AA sequence Show only first row Show all	>Lus10022349 pacid=23139354 polypeptide=Lus10022349 locus=Lus10022349.g ID=Lus10022349.BGIv1.0 annot-version=v1.0 MASHGFNKLLKTSFNVLVIALMVMSDHGSSSFLGRKRGGSSSSSVVIDPAPIGICASSVIVHGYKCQEIDVTTNDGFILNMQRIPEGRNGGDGSRRQPVL IQHGVLVDGLTWLLNSPEQNLPMILADKGFDVWIANTRGTRFSRRHTSLQPNQQEFWNWSWDELVVYDLPAVADHVYKETGQKMHYVGHSLGTLIGLASF SEGLLSDRLKSAAFLSPIAYLSHMNTVLGALAARAFVGEMTTMLGVAEFNPKGKQVSDFLNALCASPGLDCYDLMTAFTGKNCCLNSSTMAVFLKNEPQS TSTKNLVHLAQTVRDGVLAKFNYGKADYNIMHYGESRPPVYNLSNIRPDLPIFLSYGGQDALSDTRDVEHLLDNFRSHDVDKLTVQYVKEYAHADFIMGV NAKDIDGYEVAVVLFSSLTDISEMANHHPWLYNESNKRGRSRE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10022349 [exp]	0	1
AT5G46600			Aluminium activated malate tra...		Lus10022030 [exp]	1.4	0.9282
AT5G46600			Aluminium activated malate tra...		Lus10042571 [exp]	4.5	0.9009
AT1G72610		ATGER1, GLP1	A. THALIANA GERMIN-LIKE PROTEI...		Lus10015646 [exp]	5.2	0.9334
AT3G10410		CPY, SCPL49	CARBOXYPEPTIDASE Y, SERINE CAR...		Lus10017466 [exp]	8.5	0.9100
AT3G27960			Tetratricopeptide repeat (TPR)...		Lus10008786 [exp]	9.4	0.9103
AT3G23430		PHO1, ATPHO1	ARABIDOPSIS PHOSPHATE 1, phosp...		Lus10021164 [exp]	10.0	0.9257
AT5G28540		BIP1	heat shock protein 70 (Hsp 70)...		Lus10031208 [exp]	11.6	0.9270
AT2G21940		ATSK1	shikimate kinase 1 (.1.2.3.4.5...		Lus10035843 [exp]	15.7	0.9208
AT2G39518			Uncharacterised protein family...		Lus10040298 [exp]	20.4	0.9229
AT1G66230	MYB	ATMYB20	myb domain protein 20 (.1)		Lus10038913 [exp]	26.3	0.9183

Compare expression of checked genes

Lus10022349 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.