Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G49200 63 / 6e-12 O-acyltransferase (WSD1-like) family protein (.1) AT3G49210 62 / 1e-11 O-acyltransferase (WSD1-like) family protein (.1) AT3G49190 60 / 1e-10 O-acyltransferase (WSD1-like) family protein (.1) AT5G53390 57 / 1e-09 O-acyltransferase (WSD1-like) family protein (.1) AT5G53380 54 / 9e-09 O-acyltransferase (WSD1-like) family protein (.1) AT5G16350 52 / 3e-08 O-acyltransferase (WSD1-like) family protein (.1) AT5G12420 49 / 4e-07 O-acyltransferase (WSD1-like) family protein (.1) AT2G38995 49 / 4e-07 O-acyltransferase (WSD1-like) family protein (.1), O-acyltransferase (WSD1-like) family protein (.2) AT5G22490 49 / 6e-07 O-acyltransferase (WSD1-like) family protein (.1) AT2G43255 45 / 9e-06 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009718 [exp] 88 / 1e-20 AT3G49200 532 / 0.0 O-acyltransferase (WSD1-like) family protein (.1) Lus10020194 [exp] 73 / 1e-16 ND / Lus10010044 [exp] 71 / 4e-15 ND / Lus10020402 [exp] 63 / 3e-13 ND / Lus10006041 [exp] 61 / 2e-11 ND / Lus10028156 [exp] 61 / 4e-11 AT3G60240 1275 / 0.0 CUCUMOVIRUS MULTIPLICATION 2, eukaryotic translation initiation factor 4G (.2.3.4) Lus10025720 [exp] 53 / 9e-09 ND / Lus10026710 [exp] 46 / 7e-07 ND / Lus10004008 [exp] 46 / 5e-06 AT5G53390 475 / 2e-164 O-acyltransferase (WSD1-like) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G014200 [exp] 69 / 6e-14 AT5G53390 559 / 0.0 O-acyltransferase (WSD1-like) family protein (.1) Potri.019G070900 [exp] 55 / 5e-09 AT5G53390 446 / 2e-153 O-acyltransferase (WSD1-like) family protein (.1) Potri.019G070975 [exp] 54 / 1e-08 AT5G53390 427 / 4e-146 O-acyltransferase (WSD1-like) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06974 [flax] [poplar] WS_DGAT_C WS/DGAT C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10022417 pacid=23171649 polypeptide=Lus10022417 locus=Lus10022417.g ID=Lus10022417.BGIv1.0 annot-version=v1.0 ATGAGATTATTGGAGAGCTCATACGAATCTACCCAATCTCGTCTGGACAGTAAGGTACAACCCCGTATTCTTCAGTGTCGTTTTGCAACGAATCTGGACA TCGAGATAATCATTGTTGCAAGCGCAACTTCTGTAACTATTGTAAGAAGTCTGGACAGGTTGATCTTGAGGGGGGATGCTGATACCGTGCTCTACCGGAT TTCTAGACGATGCACCCAATGTGTTGCCGGTGGGGCTATCATCGCAGAGATCTTATCCTTCTTGACGGTATGTCCTCGTATTCGGATCATGGTGGTGCCC CGTAATGCCAACGGAGCTGCCCATAAAGTCGCTCGTCAAACTTTTTTATATCTCCCGCCTTTTGCCTTGACCATCCATTTCCAGAGTTACTGCAACAAGA TGACCATTTCCCTGGCGGTAGATCCAGGAGTGATTCCTGACCCTCATGTACTCCGCGATGACATTAAAGATTCTCTCAAAGCTGCCAAGGAAGCCGTTGT AAAGAAATTCGTACAGAAAGGACCCGACTCCGTGTAG
AA sequence Show only first row Show all	>Lus10022417 pacid=23171649 polypeptide=Lus10022417 locus=Lus10022417.g ID=Lus10022417.BGIv1.0 annot-version=v1.0 MRLLESSYESTQSRLDSKVQPRILQCRFATNLDIEIIIVASATSVTIVRSLDRLILRGDADTVLYRISRRCTQCVAGGAIIAEILSFLTVCPRIRIMVVP RNANGAAHKVARQTFLYLPPFALTIHFQSYCNKMTISLAVDPGVIPDPHVLRDDIKDSLKAAKEAVVKKFVQKGPDSV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G49210			O-acyltransferase (WSD1-like) ...		Lus10022417 [exp]	0	1
					Lus10001326 [exp]	3.3	1.0000
AT5G35750		AHK2	histidine kinase 2 (.1)		Lus10009736 [exp]	4.5	1.0000
					Lus10026755 [exp]	6.0	1.0000
AT1G16930			F-box/RNI-like/FBD-like domain...		Lus10008511 [exp]	6.9	1.0000
AT1G04410		c-NAD-MDH1	cytosolic-NAD-dependent malate...		Lus10021183 [exp]	7.3	1.0000
AT2G43610			Chitinase family protein (.1)		Lus10020253 [exp]	7.7	1.0000
AT1G17260		AHA10	autoinhibited H\(+\)-ATPase is...		Lus10003924 [exp]	10.4	1.0000
AT3G15850		JB67, FADB, ADS...	FATTY ACID DESATURASE B, fatty...		Lus10009470 [exp]	10.5	1.0000
AT1G60000			RNA-binding (RRM/RBD/RNP motif...		Lus10014470 [exp]	11.2	1.0000
AT3G23730		XTH16	xyloglucan endotransglucosylas...		Lus10023221 [exp]	11.7	1.0000

Compare expression of checked genes

Lus10022417 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.