Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G50380 1853 / 0 Protein of unknown function (DUF1162) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G034900 [exp] 3099 / 0 AT3G50380 2380 / 0.0 Protein of unknown function (DUF1162) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06650 [flax] [poplar] SHR-BD SHR-binding domain of vacuolar-sorting associated protein 13
Representative CDS sequence Show only first row Show all	>Lus10022476 pacid=23171774 polypeptide=Lus10022476 locus=Lus10022476.g ID=Lus10022476.BGIv1.0 annot-version=v1.0 ATGTTCTTCCGCGAGGCACTCAGGCGGAGACTCTCGTCTCTGCTGCAGCCGTGGTTGCTGGAGGAGCCGGAGATTGAATTGGAGCTAGGTATAATCAACT CCCGTCTCACTGCGAGGAGCCTTAACCTGGATGCTTCTTCGCTCAATCCATTTCTTGATAGTTCCTGTCAGTTCTCGCTGGCGAAGGTGAATGTGGAGCT ATTTTCTGTGCGGTTTTCCAATTGGTCGGCTCCTGCTCTCACTGTTGAAGTTCGCGGCGTGAATGTTGTGCTCTCAGCAGGGGAAATGAAAGAAGACGAG CGTTTGAGTAGAGCTAGGAGGAGGACGAGTGAGGATGCTTATGAGGAGAAGAAAAAGAGAGTCGCTGGGCTTGATCCTCAGGGCAGTGACGTGCATGATC TACTGGAGAGGATGTTTAGTACAAGTTGCTCAAGCCGTAGTTTCAAGACATCTCTGTTACATGCTGTTCTTGCACATTGCAGTCTTCGGATATTCGATAT ATGTCTTGAAGTGCAATACCCCAGTGTAAATGACGCGCCTCAGTGCTTAGCAGAATTGAAATCGCTAAATATTGAATCCGACAATCTTGAGAGGTGTTTT GTCAGACAACTTACAGAAGCAATAATTATACCTCAGAAAGAGACCTCTTTTGTCATGGATTTTAGAGGATTTGACATCGGATATAGGATGACTGACCAAT CGGATCAAGTTGTTTCTTCTGCAGATCTAGTTGCATATGCTAAACTTAGTGATCTTCATCTAATAGACTTCAGTGTCCATGCTTCAGAATGGAATCTATT ACTGTCTCCAATTGACTTACCAGTTCTGTCAATATATGTCAAGACTTTCTCGAATAAATCAAAGAGGGTTAGAAATGGTAGAGAGCTTTGGAAAATTGCT GCAAACAGATTACGATATGCGAATTTATCTCCCAGGCTTTCCTTGTATAATTTAGTCGAATTTGTCTGTCTATGGCTACAATATCTTGGTACTTATGAGT GTCTATTGTTGCTAGTTGACTATGCTGATAAGGGATCATTAAAAATGGTCATTCCCAAGATGTGCAAGGATAAGATGCTCTTGAATTCTGTTAAACACAG ATGGTTGTTGATTTCTGGTTTTGAGAAAGAGCTTCCAGCTGAATATATTGCCCAGGCACGACGGATAGCTCGGCATAGAGTTACAATGAGCATACAACAT CGTCAAAGCAATTACATGTCATCTACCAGTGGTCTGGTCAAAGTATTTTCTAAGGCTTTCCAGGGATTATCTGTTATCTGGAATACGATCTGCAGGATCC TCTTGATTTTACGCTGTTTCTGTTTCACAAATCTCTTCCTTCAGAAACCAGAAGTTCGTGGTATATTGGAAGTCAAGTCCGAAGATTACTTCCCTGAATT CCGTGTCCTCATATACTTTGGAAAAATCTCCATCACCTTATTCCCTGTGTTGGATTCTCAGAGCGCTAATGAACAATTAGAACCGGTTGTTGGTATTTCA ATTTCAGACCTCTACTCGTTCTGTCTATCAATGGATGACTTACTATGCTTGTATGTAGACAAAACCTTTGAACAGTCCATGTTTATTTCCTTTGGGCAGT TGAAAGTTAATCCTTCATGCAAATCCACTAGCTCAACTGAAATCCAATCAAAGGATAATTTTAAGTTTGATAATGCAGATAAACAAATGCCATCCAAATA TTTGAAATCTGTTCTCTGGAGTGAACCCGCTCAAACACTGGTGTCTGTGCAACCAGGAACTGCTGCTGGAGGTCAAGTGGAAGGTGCCTGTTATGGGTTT CTAAAAGAGATTATTGGAGAACTGTGGCTGGCTTGGGAAAGAACATGTATCGAACTTGATACTCGTGAGGTTGAGTACTCTGAAAACCCTTGGTTTCTTT GTCAAATAAAGAACCGTTTAACACGGCCAGACCTGAATACTTCAGACTTTGGGTTTTGTGAATGTTGCCTGACTTTCGGAAAACTAAATCTGTCTCTAGG ATATCAATCAATGTTATCAGCTCTGATTTTGTGCCAACAGATAGAACAGGCTCTTAGCTTTGTCAAGGATGAAGAAATGTTATGTGTCTTGTCACAAACT ACCATAGTCCAGGAGGTGCAAGAAACTGACTTGGGAATCAAATATGAAAATTTTGTTGGTGTAATGAAGAAGACTTTGTTTAGCATGGTGCCAGAGAAAC AAATTCGACTTGGCATGTTCATAACTGGGCTTGACATTGAACTTCTTTCAAGTCAGGCTGGTCTTGGCTGTGATGGTCAAAATGGTAACAGTGTCCTTGG TCAAAGTGGGCTTCAGGTTGGGGTTGATTTCCGTAGCATTGAGGTTGCTATCTGGCCGTCTTCCAAGTATGATACAGGGTTGTTAGGATATCATGGTGTA GAACCACAGGGCCCAAGGTTGAGGGATCCTGTGAAAATGGAAATTCCTAGGATAGAGAATGAAAAGTATGCTTCTCATGGATGGGTTTCCCTAGGTTCGT ACATGAAAGTTAATGGTCTAAATATTACTGTGCGAGAAATGGTGGGAAGACAAGACTGTGGATATATTGCAGTGAAGCCAATAACTCTCCAGTTATCGTT ATTCAGGGAGTCCGTTCATTCTTTTGGCAGCACTGTCATTGCTTTCTCTACGGCTTTAAACGTAACAGCTACAAAGTTCTCTGTTTTTTCTTGCATGGAT GAGGTGGAAGATCTGTTTAAGGTTGTAGCAGGTCTGTTTTGTTCGCCTACTAATCCCTACGGTGGCTTTGACTTGGTTGGCTGTTCACATGACACGTATA TGAGGCTCCATATGGTGTTTGAAGAAGCTGGTGCCGATCATTTAAGTATGGAAGGAGCACCTTTAATTCAAAGTATTCTTCTGTGCAAAACTGAAAGCTC CTTTGCATTCAGGGAAATGGATATGATTCTTCAAAAATCGAGGATATATGATAGGTTTGATGGTCATATTGACATTGAGGATGCATTTGGCAGTGAAGAA AATTCCGTGATCCCTGATCCTAGCAGTTATGGAATTCGGATATTTGTTCATCAAAGTAACCTGGACATATCATGTGAAGAATGCAAACTGGAATTCCATG CTCATTTGGCAGAAATACGTTACGTGATTTTCAGATATGCAGATATGATGCAAAATTCTTCTACTCATTCTGGCAGTTACAACTTAGTGCAACAAGCTCA TAGTTGCACACATGAGATATCTCTTCCGAATTGCAAAGTTGCTTTTTTGTTAAGTGAAAGGCGCATACTGGATAAGTCGCTTGAAGGTTATAGCCTTGTA AATATAGCCAGGAATTCTCATTTGACGAATGAAGCTGAGACATTAAGCATTCCCTCCTACACATCATCTCAATCTTCTGATTTTACTTCATCAATCACAA ACCTATCTGCAAGTTATTGTGTTATTATAAACGCTGAACTGGATGCAATTACTGTCTCAAGATGCTCTGCAAAGAAGTTAGTCACAGCTCATCACTATGA TAAACTTGCATCTCTGCTTTTGCTTGGCGGAGATCTTCAAAGTATTTCGTTGGAAATACAGGTAATAACTTCCTATTCAAGACATGCTAGAAAAGGAACA AATAATAATAATAACTATTCTGCCGTATCTCAACATTATAACATCATGAAATTAAGCTTAGGAGTGGCACATTATGCTATTGAGCAGGGTGGTCCTTTGT TCCTCGACGTTAAAGCTCTTTCGCTGTTGGGCCAATGTTTTGCTTCATTCCTTCATCGCATAACAGATATTGTATCGATCATAAATTCATCGTCTGAACA CACACAATGTGATGAAAGGAGGCTCCAAGAAACATCGGGTACAACTCAACAGTTAAAATGGGAGCTACCTCAAGCTTCCACATTGAATGTGTCAGAGCTT TCTGTTGTTCTTGCTGTTGAAGATGGCTCTGGTGGCTTTCAGGAATTTGAGATTAGAGTTGACATCTGTATGAAATTTCAGTCACAAGACATACTGAGGG AACTGGTATTTCAAGTTTCTCGCATGTCAATCTTTTCTCAGGTCATTAGAGAACAGTTAAAAACTGGAAATCAAACACCTCATTTTTCTTCCGTGGAGTC AACTGGACCATCTCCTGTTTATCAAGGTCCTGCTATGACGTCCCGGCTCATGTATGGGAGCCATATAAGTCACCGAAGTGACATATTGAAGCACTTGATT GTATCTGTTACAGCTGAGAAGCCAAATAATGGAACTGGAAACCTAGCCGAGGTTTGGGTTGGTCAAGGTTCAATATCAGGTTTTGATATAACTATATCAC TATCTGAAATAGAGATGATTTCTTCTCTGCTTTCATCCATTTCTCCTGCACACGCTGAAGAGACAACTAATGACACAATGAAGAAACGCTGGTCCACTGA CCAAGGCAATGACAGTGATTTTACTGTTATGGTTCCTGATGGTGCCATAGTTTCAGTCCAAGATGTGCATCAACACATGTATTTTGCAGTGCAAGGAGAA GGAGATAAGTATGACGTGGTTGGTACAATTCATTATTCTCTTTCTGGAGACAGGGCTCTTTTCAGGGTCAAGCACCATGTGCAGAGGGTGTGGAAATCAT CCACCATATGGTTCTCCTTGATATCTTTGCATGCTAAGAATCATGACGGTGAACCATTTCGATTGAGCTACCGTCCAGGATCAAGTTTTGTTGATATCTG TAGCACAAGTGATAATGCAGGATCACTTTGGCGAATCGTCTCACGTGAACCAGAAAGTTCTACTGATGAGATTGACTGGGAACCGTACAATAGGTTGGTG ATGAATACTTTTTACCTGGTCAACAAAAAGAATGATTATGCTGTCGCTTTTGTCAATGGTATTCCAGAGTTTGTCAGGAAGCCTGGAAATCCTTTCAAGT TCAAAGTTTTCCGGGGTAGTATTCTGGCTCGTGCAATCACATCAGATTGTTACTTACCGGAGCCATCTGGTTCTGGAACAAATGTGGTGCCTGCTGTCCA CCAAGATCAAAGCCAAAGTTCCATGCAGAGTGGGGGTCCTCCGTGCGTTCAAATACAAAGCAATAGTATTAACATTACTATTGTTCATGAACTTCTAGAT TCGAAGGATAAGTCTCCCTTGCTTCGTTGTTGCATCAACAATTCCCAAATCAATGTTCAAGTTCTGTCTAGCAAAACCAGAGTTATGAGCACGTCAACTG CTTCACTTTTTTACTTTGATTCACAAAGAAGTGAATGGGTTGAATTTGCTCATCCAGTTGATTTATGTATATTTTACCGCTCAAGAGTAGAATCGAAAAC AAACCGCCACAAACTACCAGTTGACATCTACTGCAGAACTAACGAGGTGCATATTTCATTAAGTGAGCTTGCACTTGATGTACTTCTTTTCGTGATCGGG AAATTAGACTTGGCTGGTCCATTCTCTGTGAGGAGCTCAAAAATTCTGTCTAATTGCTGCAAGGTGGAAAACCAGTCAGGTTTAGAACTTACATGTCATC TCAGTGAAGGCAGAAGTATTAAAGTTGTCAGAGGAAAATATGCTTCAATATTTTTAAGGGATACTTCTGCAGACCAACGCGTGGAGAATACATCAGGTGT CACTGTTCAACTTTCTAATGGTGCATCTTGGATCACATCAGCAGTTCAGCTTTCTGTATTGAGATCTCAAACAGTAGCTTGGAGAACAAGAATCATGTCA CCTCAAGATTCAAGAACTCACCCTGGGCCGTTTATTGTTGTTGACATTTCAAGAAGATCGGAGGATGGTTTGAAGATTGTGGTGTCCCCTTTGATAAGGA TACATAACGAAACTGGTTTCTCCATGGAACTACGTTTTAAGCGACCTCAAGAAATTGAAGATGTATTTGCTTCAGTATTCTTGAAAACAGGGGATGCAAT CGATGATACCTTGGCAACATTTGATGCCATAAACTCATCTGGCGGACTGAAGAAGACTTTAATGTCATTGAGTGTTGGTAACTTCTTATTTTCTTTTCGG CCGGAAGTTCCAGAAGGCTCTTTCAATTCCATTAGTTCCGTCTCTGTGGGATGGTCAGATGATTTTAAAGGCGGAAAGGCAGTTCGTCTTTCTGGAATTT TTGATAAATTAGGCTATAAAGTTCGGAAGGCCCTCTCTGTTGATTCAATGACATCTTCCTTCAGCACTGCATACTGCAGTATCAAATCCAAAGATGCACA TATTACTGACTTACATTTTTTAATTCAGAGTATTGGAAGGGATATACCTATTGGAAAACCTGACACATCTAATGATGGTTCAGAGAGTAGAAGTTCAGCA GTTGCATTACGAGAACAAAGAGAAATATTTATTCTACCTACAGTGCAGGTGTCTAATTTATTGCATTTTGATATCCAGGTGCTCCTTACTGAAAGAGGCA AGTGGATGAAACATTCAGACTTCTTCTCTTTGACTTTGTTTGTGTGTGTTCCTTGGTGGAGCAATCGTAATACTATCTCTCATTGTGCAGATGTATCTCC CTCCTGTAGTGTAGACATCGGAAAGCAAGCAACTGTACCTTCTGGATCAGCAGTGAACTTTTATGCTAATCCTGCTATGATCTATTTTACTGTTACCTTA ACTGCTTTTGGTTCAAGCTGCAAACCTGTGAACAGCGGCGATTGGGTCAAGAAGTTACACAAGAACAAAAGTGATGTCTCTTGCTTAGACATTGATTTGG AATTCGGAGGTGGAAAATATTTTGCATCTCTTAGGTTGTCCCGTGGGCCCAGAGGTGTTCTGGAGGTTGCTGTCTTCACTCCGTATTCCTTGAAGAATGA GACTGATTATTCCTTGTTCTTTCTAACACCCAGTCAAAAGACCTTATCAAGGAATGAATTAGAGATGTCTGTCTCTAGCATTGCTCCAGACTTGGGCGTA TTTTTGCCTCCTAAATCAATTAGGTCATGGTTTTCGAGATCTCACAAGTTGCATCTCATTGTCTTGGAGCATCACCAATCAAAGGCGTTGCTGGACTTGG ATGCTTTGTCTGCTCTGACAGAAATAAGCTTGACAATAGAAGAGGAGTCCAGACTTGAATACATTGTGAAGTTGGGGGTGTCTGTAGGACCTCATATAAG CAAGGTGGTTGTCCCGTCACAGATGGTAACTTTGGTCCCAAGACATTTGGTATTCAATGAGTCAGATGAAAGTGTTAGTATTCGTCAATGTTACCTGGAG AATGAAACAGCAGGAATGGTTTGCGTTGGCAGTAAGCAAAGAAAGGCATTGCTACTGCAGAGTGGCATTACCAAGAGCAAGGAACTCAATTCGTTTGAAA ATATGATTAGAAGACATAGAAATGATGTAGATTCTTCATTATTGTATATTCAGTTTCGTTTGGATAAGTCTTCTACTTGCTGGTCAGGGCCAGTGTGTAT TGCTTCCTTGGGGCGTTTCTTTGTGAAATTCAGGAAAGAGCCTGACCAAGTTCAAGATGTAGATAACAGCACTACAGAATTTGCTGCAGTTTTTGTTGCT GACGAAGGGTCTGTTCTTGGTGTGCACTTCCACAAACCACCCAATATTGGTCTTCCCTATAGGATTGAGAATCACTTACATGATACTTCTATAACATATT ACCAGAAGGATTCAGCAGAGAGAGAGGTTCTTGGTTCTAGCGATAATGCTTTTTATGTCTGGGAAGATTTGACCCTGCCGCACAAACTAGTTGTTTTAAT CAACGGTCTGCACCTATCGCGTGAAATCAACCTGGATAAGGTGCGTACTTGGAAGCCTTTCAAAAGGTTGACTCCACTCAGAAGCCTTGTCTCTCATTCA CTTTCGGACGGAAAAGGGGTCCAGAAATCCAGCCAGTCAAACAACATAGCTGTTGTGAGGATAGGATATGAAGTGTATGCTGAAGGTGCTACACGGGTTT TAAGGATTTGTGAGTTTTCTGATAGTCACAAAGGAGACCGATCGTCTCAGTCTAGTGCACGGATTCGATTGCGGCTGACCGAGTTTGCTATTCGTATACT TGAACAAGGAACAGAGGTTTCAGATGATAATGAGGATTTGCGTTATAGCCCTTTGGCCGTGGCAAGATTGGGAAATATTGACTTGGATTCAGTAATCACT GATGAGCAGAAATATAACCTGATCAGTATACAGCTATTAGCCGTCGATAATAAGTGGAAAGGTGCCCCTTTTGCATCTATGCTTCGGAGACATCAACTAG AATCAAGTGGCCTAGATTTTCCTGTACTCAAAGTTGTGTTTGTCCCCATTTCAACCAGCTCGAAAGTGACTCAAGTCAAATATTCATCAATTATCCTGCA GCCAATTGATTTGAACATAGACGAGGAGACTCTGATGAGACTTGCCTCATTTTGGAGATATTCTCTCAGTGACTCCAGTGCTCCAAGTCGGCAATATTAC TTCGACTATTTTGAGATCCATCCCATAAAGATAATTGCAAACTTTCTCCCCGGGGACTCTTATTCAAGTTATAACTCAACACAGGAAACTCTAAGATCGC TAATCCATAGTGTTGTGAAGGTTCCCACTATTAAAAATATGGTAGTAGAGCTGAACGGGGTTCTGTTAACTCATGCTTTGATCACTATGCGGGAATTGCT CATAAAATGTGCACAACACTACTCCTGGTATGCAATGAGGGCCATCTATATCGCCAAGGGAAGCCCCTTGCTTCCTCCAGCCTTTGCATCTATGTTTGAT GACATGGCTTCATCTTCTCTTGATGTCTTCTTCGATCCTTCTCGTGGATTGGTCAGTCTTCCAGGCTTAACTTTCGGTACCTTCCGGATCATCAGCAATT GTATTGGTGGCAGAGGGTTCTCAGGAACAAAGCGCTACTTTGGTGATTTGGGGAAAACGTTGAGGACATTGGGGTCAAATGTGCTATTTGCTGCTGTAAC CGAAGTATCTGACTCTGTCCTGAGGGGAGCGGAAACAACCGGCTTTGATGGAATGGTCCGCGGTTTTCACCAAGGAATTCTGAATTTGGCCATGGAACCA TCAGTCATTGGGACAGCCGTTATGGTTGGTGGCCCAGATAGGAAGATCAAACTTGACAGGAGTCCAGGAATCGATGAGCTGTACATTGAAGGATACCTGC AAGCCATGCTGGATTCGATGTATAAACAAGAGTACCTTAGGGTCAGAGTCATAGATGATCAGGTTATCCTGAAGAATCTACCTCCAAGCAGTTCCTTGAT AGATGAGATAATGGACCGTGTGAAGGCCTTCTTGGTGAGCAAGGCACTGTTGAAAGGAGACGCAAACTCGTCTTCTCGCCCATTCCGAAGTCTGAGGGGT GAAAACGATTGGAAGATTGGTCCGACAGTGCTGACGCTGTGTGAGCACCTGTTTGTCAGCTTTGCAATCCGCATTCTGAGAAAGCAGACCGGGAAAGTGT CTGGAAAGGTGTTAGAGAAGATGAAGTTTAAAAGCAGCGAAGATGATGGTAAAGCAATAGTCCCAGTTTCTGGCGGTGGCAGTGGGGAGATGAAATTCGT GTGGCAATGGGGTATTGGTAAATTTGTAATGTCAGGTATCTTAGCATATATTGACGGAAGATTATGCCGCCGGATTCCTAACCCGTTAGCTCGGAGGATC GTGGGAGGCTACTTGCTGAGTTTCCTAGACAAGGATGAAAGGGACAAGTGA
AA sequence Show only first row Show all	>Lus10022476 pacid=23171774 polypeptide=Lus10022476 locus=Lus10022476.g ID=Lus10022476.BGIv1.0 annot-version=v1.0 MFFREALRRRLSSLLQPWLLEEPEIELELGIINSRLTARSLNLDASSLNPFLDSSCQFSLAKVNVELFSVRFSNWSAPALTVEVRGVNVVLSAGEMKEDE RLSRARRRTSEDAYEEKKKRVAGLDPQGSDVHDLLERMFSTSCSSRSFKTSLLHAVLAHCSLRIFDICLEVQYPSVNDAPQCLAELKSLNIESDNLERCF VRQLTEAIIIPQKETSFVMDFRGFDIGYRMTDQSDQVVSSADLVAYAKLSDLHLIDFSVHASEWNLLLSPIDLPVLSIYVKTFSNKSKRVRNGRELWKIA ANRLRYANLSPRLSLYNLVEFVCLWLQYLGTYECLLLLVDYADKGSLKMVIPKMCKDKMLLNSVKHRWLLISGFEKELPAEYIAQARRIARHRVTMSIQH RQSNYMSSTSGLVKVFSKAFQGLSVIWNTICRILLILRCFCFTNLFLQKPEVRGILEVKSEDYFPEFRVLIYFGKISITLFPVLDSQSANEQLEPVVGIS ISDLYSFCLSMDDLLCLYVDKTFEQSMFISFGQLKVNPSCKSTSSTEIQSKDNFKFDNADKQMPSKYLKSVLWSEPAQTLVSVQPGTAAGGQVEGACYGF LKEIIGELWLAWERTCIELDTREVEYSENPWFLCQIKNRLTRPDLNTSDFGFCECCLTFGKLNLSLGYQSMLSALILCQQIEQALSFVKDEEMLCVLSQT TIVQEVQETDLGIKYENFVGVMKKTLFSMVPEKQIRLGMFITGLDIELLSSQAGLGCDGQNGNSVLGQSGLQVGVDFRSIEVAIWPSSKYDTGLLGYHGV EPQGPRLRDPVKMEIPRIENEKYASHGWVSLGSYMKVNGLNITVREMVGRQDCGYIAVKPITLQLSLFRESVHSFGSTVIAFSTALNVTATKFSVFSCMD EVEDLFKVVAGLFCSPTNPYGGFDLVGCSHDTYMRLHMVFEEAGADHLSMEGAPLIQSILLCKTESSFAFREMDMILQKSRIYDRFDGHIDIEDAFGSEE NSVIPDPSSYGIRIFVHQSNLDISCEECKLEFHAHLAEIRYVIFRYADMMQNSSTHSGSYNLVQQAHSCTHEISLPNCKVAFLLSERRILDKSLEGYSLV NIARNSHLTNEAETLSIPSYTSSQSSDFTSSITNLSASYCVIINAELDAITVSRCSAKKLVTAHHYDKLASLLLLGGDLQSISLEIQVITSYSRHARKGT NNNNNYSAVSQHYNIMKLSLGVAHYAIEQGGPLFLDVKALSLLGQCFASFLHRITDIVSIINSSSEHTQCDERRLQETSGTTQQLKWELPQASTLNVSEL SVVLAVEDGSGGFQEFEIRVDICMKFQSQDILRELVFQVSRMSIFSQVIREQLKTGNQTPHFSSVESTGPSPVYQGPAMTSRLMYGSHISHRSDILKHLI VSVTAEKPNNGTGNLAEVWVGQGSISGFDITISLSEIEMISSLLSSISPAHAEETTNDTMKKRWSTDQGNDSDFTVMVPDGAIVSVQDVHQHMYFAVQGE GDKYDVVGTIHYSLSGDRALFRVKHHVQRVWKSSTIWFSLISLHAKNHDGEPFRLSYRPGSSFVDICSTSDNAGSLWRIVSREPESSTDEIDWEPYNRLV MNTFYLVNKKNDYAVAFVNGIPEFVRKPGNPFKFKVFRGSILARAITSDCYLPEPSGSGTNVVPAVHQDQSQSSMQSGGPPCVQIQSNSINITIVHELLD SKDKSPLLRCCINNSQINVQVLSSKTRVMSTSTASLFYFDSQRSEWVEFAHPVDLCIFYRSRVESKTNRHKLPVDIYCRTNEVHISLSELALDVLLFVIG KLDLAGPFSVRSSKILSNCCKVENQSGLELTCHLSEGRSIKVVRGKYASIFLRDTSADQRVENTSGVTVQLSNGASWITSAVQLSVLRSQTVAWRTRIMS PQDSRTHPGPFIVVDISRRSEDGLKIVVSPLIRIHNETGFSMELRFKRPQEIEDVFASVFLKTGDAIDDTLATFDAINSSGGLKKTLMSLSVGNFLFSFR PEVPEGSFNSISSVSVGWSDDFKGGKAVRLSGIFDKLGYKVRKALSVDSMTSSFSTAYCSIKSKDAHITDLHFLIQSIGRDIPIGKPDTSNDGSESRSSA VALREQREIFILPTVQVSNLLHFDIQVLLTERGKWMKHSDFFSLTLFVCVPWWSNRNTISHCADVSPSCSVDIGKQATVPSGSAVNFYANPAMIYFTVTL TAFGSSCKPVNSGDWVKKLHKNKSDVSCLDIDLEFGGGKYFASLRLSRGPRGVLEVAVFTPYSLKNETDYSLFFLTPSQKTLSRNELEMSVSSIAPDLGV FLPPKSIRSWFSRSHKLHLIVLEHHQSKALLDLDALSALTEISLTIEEESRLEYIVKLGVSVGPHISKVVVPSQMVTLVPRHLVFNESDESVSIRQCYLE NETAGMVCVGSKQRKALLLQSGITKSKELNSFENMIRRHRNDVDSSLLYIQFRLDKSSTCWSGPVCIASLGRFFVKFRKEPDQVQDVDNSTTEFAAVFVA DEGSVLGVHFHKPPNIGLPYRIENHLHDTSITYYQKDSAEREVLGSSDNAFYVWEDLTLPHKLVVLINGLHLSREINLDKVRTWKPFKRLTPLRSLVSHS LSDGKGVQKSSQSNNIAVVRIGYEVYAEGATRVLRICEFSDSHKGDRSSQSSARIRLRLTEFAIRILEQGTEVSDDNEDLRYSPLAVARLGNIDLDSVIT DEQKYNLISIQLLAVDNKWKGAPFASMLRRHQLESSGLDFPVLKVVFVPISTSSKVTQVKYSSIILQPIDLNIDEETLMRLASFWRYSLSDSSAPSRQYY FDYFEIHPIKIIANFLPGDSYSSYNSTQETLRSLIHSVVKVPTIKNMVVELNGVLLTHALITMRELLIKCAQHYSWYAMRAIYIAKGSPLLPPAFASMFD DMASSSLDVFFDPSRGLVSLPGLTFGTFRIISNCIGGRGFSGTKRYFGDLGKTLRTLGSNVLFAAVTEVSDSVLRGAETTGFDGMVRGFHQGILNLAMEP SVIGTAVMVGGPDRKIKLDRSPGIDELYIEGYLQAMLDSMYKQEYLRVRVIDDQVILKNLPPSSSLIDEIMDRVKAFLVSKALLKGDANSSSRPFRSLRG ENDWKIGPTVLTLCEHLFVSFAIRILRKQTGKVSGKVLEKMKFKSSEDDGKAIVPVSGGGSGEMKFVWQWGIGKFVMSGILAYIDGRLCRRIPNPLARRI VGGYLLSFLDKDERDK

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G50380			Protein of unknown function (D...		Lus10022476 [exp]	0	1
AT1G21580			Zinc finger C-x8-C-x5-C-x3-H t...		Lus10028660 [exp]	1.4	0.9625
AT3G05040		HST1, HST	HASTY 1, HASTY, ARM repeat sup...		Lus10033845 [exp]	2.2	0.9411
AT3G62300		ATDUF7	DOMAIN OF UNKNOWN FUNCTION 724...		Lus10000430 [exp]	3.7	0.9353
AT3G05040		HST1, HST	HASTY 1, HASTY, ARM repeat sup...		Lus10018994 [exp]	5.3	0.9239
AT5G59710		ATVIP2, VIP2	VIRE2 interacting protein 2 (....		Lus10004921 [exp]	5.9	0.9122
AT3G54280		RGD3, ATBTAF1, ...	ROOT GROWTH DEFECTIVE 3, DNA b...		Lus10003868 [exp]	6.8	0.9498
AT4G13970			zinc ion binding (.1)		Lus10003970 [exp]	8.7	0.9163
AT5G49430			WD40/YVTN repeat-like-containi...		Lus10037748 [exp]	8.7	0.9414
AT4G02260		AT-RSH1, RSH1, ...	RELA-SPOT HOMOLOG 1, RELA/SPOT...		Lus10003599 [exp]	10.1	0.9123
AT5G10470		KAC1, KCA1	KINESIN CDKA;1 ASSOCIATED 1, k...		Lus10035940 [exp]	10.8	0.9143

Compare expression of checked genes

Lus10022476 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.