Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035139 [exp] 84 / 6e-21 AT2G16676 41 / 1e-04 unknown protein Lus10020135 [exp] 60 / 2e-11 ND / Lus10014248 [exp] 50 / 1e-07 ND / Lus10016642 [exp] 48 / 1e-07 ND 38 / 8e-04 Lus10019378 [exp] 42 / 4e-05 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022598 pacid=23178608 polypeptide=Lus10022598 locus=Lus10022598.g ID=Lus10022598.BGIv1.0 annot-version=v1.0 ATGGAAGCCGCCGTCGCCAGACAAGTTTCGCTTGCTGCAATCGATGAAACTATGGGTTCGGTTGGAGTGAGTTCCGGATGGAGTACACTCCTCTGCCTTT GTTTCTGGGTTGTTGGGTTCGATCGGGGAGGTCTTGGTCGCCGTCAGGCTCGATCGGAGGACGGAATGGAGTTCAGGGTCCGATTGCGGTATGAATGGTT GCCAGTGGTCTGCTTCAGCTGTGGGCGTCTAGGACACCCTCATACGCGCTGCTCGGCCGGTGGTCTTCCTCCCTTGGATCTTGATGCGCGTGCGCCATGG ATTACTCTGCGAATCGACACTTATCGAAGAGTCAATGAGTTCACCATGCAACCGGAATCTGGGACTGTTGCGCCGCTGTTGCTTCCTCGACATACGGCGG AGCAGGGACATAAGCTCTGTTGGTTCTTCCTCGGTGCGGCCGCCGACTAA
AA sequence Show only first row Show all	>Lus10022598 pacid=23178608 polypeptide=Lus10022598 locus=Lus10022598.g ID=Lus10022598.BGIv1.0 annot-version=v1.0 MEAAVARQVSLAAIDETMGSVGVSSGWSTLLCLCFWVVGFDRGGLGRRQARSEDGMEFRVRLRYEWLPVVCFSCGRLGHPHTRCSAGGLPPLDLDARAPW ITLRIDTYRRVNEFTMQPESGTVAPLLLPRHTAEQGHKLCWFFLGAAAD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10022598 [exp]	0	1
AT1G71040		LPR2	Low Phosphate Root2, Cupredoxi...		Lus10032443 [exp]	1.0	0.9308
AT2G39450		ATMTP11	Cation efflux family protein (...		Lus10040318 [exp]	1.7	0.9226
AT4G03230			S-locus lectin protein kinase ...		Lus10031592 [exp]	2.0	0.9209
AT5G49690			UDP-Glycosyltransferase superf...		Lus10008955 [exp]	2.6	0.9068
AT1G28280			VQ motif-containing protein (....		Lus10041929 [exp]	3.5	0.9230
AT3G54700		PHT1;7	phosphate transporter 1;7 (.1)		Lus10033886 [exp]	5.1	0.8918
AT1G22710		SUT1, ATSUC2, S...	SUCROSE TRANSPORTER 1, ARABIDO...		Lus10007702 [exp]	5.5	0.9086
AT5G37660		PDLP7	plasmodesmata-located protein ...		Lus10020814 [exp]	7.1	0.9161
AT1G12940		ATNRT2.5	nitrate transporter2.5 (.1)		Lus10013042 [exp]	7.7	0.8948
AT1G48480		RKL1	receptor-like kinase 1 (.1)		Lus10031350 [exp]	8.5	0.9033

Compare expression of checked genes

Lus10022598 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.