Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G38360 293 / 3e-98 LAZ1 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) AT1G77220 123 / 4e-33 Protein of unknown function (DUF300) (.1) AT1G23070 67 / 3e-13 Protein of unknown function (DUF300) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003321 [exp] 335 / 2e-116 AT4G38360 321 / 2e-106 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Lus10018920 [exp] 122 / 7e-33 AT1G77220 316 / 5e-104 Protein of unknown function (DUF300) (.1) Lus10028621 [exp] 121 / 1e-32 AT1G77220 316 / 2e-103 Protein of unknown function (DUF300) (.1) Lus10035832 [exp] 68 / 1e-13 AT1G23070 205 / 6e-63 Protein of unknown function (DUF300) (.1) Lus10036614 [exp] 60 / 9e-11 AT1G23070 184 / 2e-55 Protein of unknown function (DUF300) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G165600 [exp] 267 / 6e-88 AT4G38360 717 / 0.0 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Potri.004G204600 [exp] 259 / 7e-85 AT4G38360 713 / 0.0 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Potri.002G071400 [exp] 115 / 3e-30 AT1G77220 753 / 0.0 Protein of unknown function (DUF300) (.1) Potri.005G188200 [exp] 114 / 9e-30 AT1G77220 756 / 0.0 Protein of unknown function (DUF300) (.1) Potri.018G062600 [exp] 66 / 7e-13 AT1G23070 522 / 0.0 Protein of unknown function (DUF300) (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022626 pacid=23178645 polypeptide=Lus10022626 locus=Lus10022626.g ID=Lus10022626.BGIv1.0 annot-version=v1.0 ATGGGCATTGCTTCTGCTTTCCATCTATACGTGTTCCCAGCGAAGCCATATGCCCTAATGGGAGATCGTTTCACCGGAACGATCTCAGTCCTCGGAGACT ATGCTTCGGTCGATTGCCCTATAGATCCTGACGAGGTCAGGGACAGCGAACGCCCCACGAAACTACGGCTCCCTCAGCCCGACGAAGATGTCAGGAGCGG AATGACACTCAAGGAAAGTGTCCGGGATGTTGTTGTTGGTGGCGGTGGATTCATAGTGAATGATGTCAAGTTCACAGTGACACAAGCAGTGGAGCCAGTG GAAAAGGGCATAACGAAGTTCAACGAGAAACTACACAAGATCTCTGAAAACATGAGGAAGGACAAGGACAAGAAGAGAACGAAGGACGATAGCTGTTTAA CTTCGTCTCCACGAAGAGTTATTCGTGGTATAGATGACCCTCTTCTGAATGGAAGCCTTAGTGACAACAGTGGAGCAATTAGAACGAAGAAGCATCGTCG AAAATCAGACTATAACAGTGGCGAAAGTGGGGGAGAAAGTAGCAGTGATCAGAACTATGGTGGATATCAGGTCAGGGGACGTAGGTGGATAACTAAAGAC TAA
AA sequence Show only first row Show all	>Lus10022626 pacid=23178645 polypeptide=Lus10022626 locus=Lus10022626.g ID=Lus10022626.BGIv1.0 annot-version=v1.0 MGIASAFHLYVFPAKPYALMGDRFTGTISVLGDYASVDCPIDPDEVRDSERPTKLRLPQPDEDVRSGMTLKESVRDVVVGGGGFIVNDVKFTVTQAVEPV EKGITKFNEKLHKISENMRKDKDKKRTKDDSCLTSSPRRVIRGIDDPLLNGSLSDNSGAIRTKKHRRKSDYNSGESGGESSSDQNYGGYQVRGRRWITKD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G38360		LAZ1	LAZARUS 1, Protein of unknown ...		Lus10022626 [exp]	0	1
AT4G38360		LAZ1	LAZARUS 1, Protein of unknown ...		Lus10003321 [exp]	1.4	0.9356
AT1G61670			Lung seven transmembrane recep...		Lus10025219 [exp]	5.7	0.8766
AT5G47090			unknown protein		Lus10035063 [exp]	6.7	0.8943
AT1G55340			Protein of unknown function (D...		Lus10013616 [exp]	6.7	0.8880
AT5G62200			Embryo-specific protein 3, (AT...		Lus10027387 [exp]	6.8	0.8810
AT2G20140		RPT2b	regulatory particle AAA-ATPase...		Lus10015524 [exp]	7.6	0.9052
AT2G21150		XCT	XAP5 CIRCADIAN TIMEKEEPER, XAP...		Lus10007576 [exp]	7.7	0.8939
AT5G22875			unknown protein		Lus10037369 [exp]	10.0	0.8518
AT2G32080		PUR ALPHA-1, PU...	purin-rich alpha 1 (.1.2)		Lus10001781 [exp]	13.4	0.8932
AT1G32310			unknown protein		Lus10030955 [exp]	13.6	0.8993

Compare expression of checked genes

Lus10022626 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.