Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G52750 382 / 2e-131 FTSZ2-2 Tubulin/FtsZ family protein (.1) AT2G36250 373 / 5e-128 ATFTSZ2-1, FTSZ2-1 Tubulin/FtsZ family protein (.1.2) AT5G55280 228 / 1e-71 ATFTSZ1-1, CPFTSZ, FTSZ1-1 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014196 [exp] 476 / 1e-168 AT3G52750 569 / 0.0 Tubulin/FtsZ family protein (.1) Lus10017047 [exp] 386 / 9e-133 AT2G36250 597 / 0.0 Tubulin/FtsZ family protein (.1.2) Lus10021367 [exp] 385 / 3e-132 AT3G52750 607 / 0.0 Tubulin/FtsZ family protein (.1) Lus10016579 [exp] 225 / 5e-71 AT5G55280 535 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10002442 [exp] 185 / 8e-56 AT5G55280 479 / 6e-169 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10035091 [exp] 56 / 2e-08 AT1G75010 559 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1) Lus10031930 [exp] 54 / 7e-08 AT1G75010 549 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G083100 [exp] 393 / 8e-136 AT3G52750 647 / 0.0 Tubulin/FtsZ family protein (.1) Potri.004G203100 [exp] 359 / 2e-122 AT2G36250 613 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.009G164100 [exp] 311 / 8e-104 AT2G36250 524 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.001G359500 [exp] 228 / 3e-72 AT5G55280 547 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0566 [flax] [poplar] Tubulin PF00091 [flax] [poplar] Tubulin Tubulin/FtsZ family, GTPase domain CL0442 [flax] [poplar] Tubulin_C PF12327 [flax] [poplar] FtsZ_C FtsZ family, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10022718 pacid=23178572 polypeptide=Lus10022718 locus=Lus10022718.g ID=Lus10022718.BGIv1.0 annot-version=v1.0 ATGCAGGCGGGCATGGGGGGAGGAACTTGGACTGGTGCGGCTCCAAGGCCAGCAGGCATTGCAAAAGCTATGGGCATCCTCACAGTTGGTATAGTGACAA CCCCGTTTTCTTTTGAGGGACGAAAGAGAGCTATTCAGGCCCATGAAGGAATTGCAGAATTAAGAGGAAATGTCGATACACTGATCGTCATTCCAAATGA CAAGTTATTGACTGCTGTATCCGAGTCCACTCCAGTAACAGAAGCATTTAACCTTGCTGATGATATTCTGCGACAGGGAGTTCGTGGTATCTCTGATATC ATTACGATTCCAGGACTTGTGAATGTGGATTTTGCTGATGTCCAGACAATAATGACAAATGCTGGTTCTTCACTGATGGGGATAGGAACGGCAACAGGTC AAACAAGGGCAAGGGATGCGGCCTTAAATGCAATCAAATCGCCATTACTAGATATTGGCATAGAGCGTGCAACTGGAATTGTGTGGACCATTACCGGTGG AACTGATTTGACCTTATTTGAGGATCAGTATCATTATATCATCCATACGAACGCACCTGGAATGCTCTTTCCAGAACATGACCTGACTGGTTTGCCTCGT CATTTCCCTGTTCAACTCCTGCAGGTGAATGCTGCAGCCGAAGTTATATACGATCTCGTAGATCAAACTGCGAATTTGATATTTGGAGCGGTCATAGATG AATCATATACTGGTCAAGTCAGCATAACGCTTGTTGCAACTGGGTTCAAGCGCCAACAAGAATTGGAAGACAAATCCGTGGAGGCAAGTCAGCCAGCACC AGAATCAAGGGATGGCAAGAACGATGGTGAAATCAACAGGCGACCGTTCTCAGTTACTGGAGGCGGTTCGGTAGAGATACCCGAGTACCTAAAAAAGAAG GGTCGTTCTCGGTTTTCAAGATCGTAG
AA sequence Show only first row Show all	>Lus10022718 pacid=23178572 polypeptide=Lus10022718 locus=Lus10022718.g ID=Lus10022718.BGIv1.0 annot-version=v1.0 MQAGMGGGTWTGAAPRPAGIAKAMGILTVGIVTTPFSFEGRKRAIQAHEGIAELRGNVDTLIVIPNDKLLTAVSESTPVTEAFNLADDILRQGVRGISDI ITIPGLVNVDFADVQTIMTNAGSSLMGIGTATGQTRARDAALNAIKSPLLDIGIERATGIVWTITGGTDLTLFEDQYHYIIHTNAPGMLFPEHDLTGLPR HFPVQLLQVNAAAEVIYDLVDQTANLIFGAVIDESYTGQVSITLVATGFKRQQELEDKSVEASQPAPESRDGKNDGEINRRPFSVTGGGSVEIPEYLKKK GRSRFSRS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G52750		FTSZ2-2	Tubulin/FtsZ family protein (....		Lus10022718 [exp]	0	1
					Lus10022719 [exp]	1.0	0.7663
AT1G27190			Leucine-rich repeat protein ki...		Lus10010615 [exp]	4.6	0.7034
AT3G49740			Tetratricopeptide repeat (TPR)...		Lus10019278 [exp]	7.1	0.7426
AT5G46100			Pentatricopeptide repeat (PPR)...		Lus10015397 [exp]	9.5	0.6266
AT4G20310			Peptidase M50 family protein (...		Lus10038402 [exp]	23.8	0.5841
AT5G01110			Tetratricopeptide repeat (TPR)...		Lus10028943 [exp]	28.7	0.6195
AT2G37500			arginine biosynthesis protein ...		Lus10023757 [exp]	35.0	0.5547
AT4G13650			Pentatricopeptide repeat (PPR)...		Lus10040997 [exp]	40.3	0.6506
AT4G14170			Pentatricopeptide repeat (PPR)...		Lus10026778 [exp]	59.4	0.6358
AT5G08680			ATP synthase alpha/beta family...		Lus10024114 [exp]	80.2	0.6016

Compare expression of checked genes

Lus10022718 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.