Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G07020 740 / 0 UGT80A2, SGT UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) AT1G43620 561 / 0 UGT80B1, TT15 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) AT5G24750 77 / 7e-15 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011882 [exp] 794 / 0 AT3G07020 885 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10020382 [exp] 692 / 0 AT3G07020 790 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10011883 [exp] 672 / 0 AT3G07020 648 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10024544 [exp] 639 / 0 AT3G07020 714 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10009556 [exp] 636 / 0 AT3G07020 707 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10018878 [exp] 580 / 0 AT1G43620 849 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Lus10028572 [exp] 574 / 0 AT1G43620 840 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Lus10020381 [exp] 512 / 9e-178 AT3G07020 568 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10009557 [exp] 272 / 5e-88 AT3G07020 261 / 6e-83 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G238600 [exp] 749 / 0 AT3G07020 839 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.014G178300 [exp] 744 / 0 AT3G07020 817 / 0.0 UDP-glucosyl transferase 80A2, sterol glucosyltransferase, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.002G067100 [exp] 584 / 0 AT1G43620 800 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Potri.005G193100 [exp] 575 / 0 AT1G43620 805 / 0.0 TRANSPARENT TESTA 15, UDP-Glycosyltransferase superfamily protein (.1.2.3) Potri.003G021100 [exp] 84 / 6e-17 AT5G24750 606 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase CL0113 [flax] [poplar] GT-B PF03033 [flax] [poplar] Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10022815 pacid=23159932 polypeptide=Lus10022815 locus=Lus10022815.g ID=Lus10022815.BGIv1.0 annot-version=v1.0 ATGAGCTCGTCGTCAACGGCCACCATCGAGAAATGCACCGGCGATGGTAATGTTGCTGCTTCCGGTGGTAGTAGCGGCGGCGGTACAGTGAATAACGGAG GAGATGATGAGCCTCTCGTTGCAGTAGAGGTTCAGAATGTACCACCGTTGCAAATAGTAATGCTTATTGTTGGCACTCGAGGAGATGTGCAGCCATTTGT TGCCATCGGTCTGCGACTGAAGGATTATGGTCATCGTGTCAGACTAGCTACTCATTCAATATTTAAAGAGTTCGTCTTGTCAGCTGGGTTGGAGTTCTAC CCTTTAGGTGGAGACCCAAAGGTTCTTATTGGTTACATGGTGAGAAATAGAGGCTTCTTGCCTTCCGTGCCATCCGATATACCTGTGAATCGGAATCAAA TGAAGCAAATAATATGGTCCTTGCTTCCTGCTTGTAAGGAACCTGACATTGATTCTGGTATTCCCTTTGAGGCAGAAGCTATAATCGCCAATCCTCCAGC ATATGGGCAAATTCATGTAGCAGAGGCGCTGAACATCCCTATCCACATATCTTTCATTATGCCATGGACGCCAACAAATGAGTTTCCGCACCCTTTATCT CGGGTCAAGCAACCAGCTGCATATTGGCTTTCATATCAAGTAGTAGACTCTCTGATTTGGCTGGGAATGCGGGATTTGATAAATGACTTCAGGAAGAAAT TGTTGAAGCTACGTCCTGTTACCTATCTTACTGGTTCACAAGGTTTCAGTACTGATTTACCACATGCATACCTCTGGAGTCCTCACCTTGTCCCTAAACC AAAAGACTGGGGACCAAAAGTAGATGTGGTAGGATTTTGCTTTCTCGATCTGGCATCAAATTTCGACCCTCCTGATGAACTCGTGACGTGGCTGAAAGCT GGTCCGAAACCTATTTATGTTGGATTTGGTAGCCTTTTGTGTAAATTGTTGCAGCCAGTTGAGGAACCTGAGAAAATGACATCAATAATTGTGGAGGCAT TGGAACAAACTGGACAGAGGGGGATCATTAACAAAGGCTGGGGTGGCCTTGGCAACTTGGCAGAACCGAAGGACTTCGTATATCTCTTAGATAACGTCCC TCATGACTGGTTATTCCTGCAGTGCAAAGCAGTGGTTCATCATGGAGGTTGCGGGACGACAGCTGCTGGTCTTAAAGCCGCGTGCCCGACGACAATCATA CCCTTCTTCGGCGACCAACATTTCTGGGGCGATAGGGTACACGCTAGAGGAGTCGGCCCACCTCCTATTCCAGTCGATGAATTCTCGCTTCTTAAGTTGG TCGATGCTATAAAGTTCATGCTCGATCCCCAGGTGAAGGAGAGGGTAGTGGAGCTTGCCAGGGCAATGGATGATGAAGATGGAGTAGCTGGTGCAGTTAC AGCATTCTTCAACCAACTACCTAAGAGAAGTAAGTCCGAGCCTGCTCGAGTTTCGAAACCATCTAGCTCCATTGGCCTCTCCTTCAGTCGATGCTTCGGC TGTTCCATGATAAGAAAGTTGTGA
AA sequence Show only first row Show all	>Lus10022815 pacid=23159932 polypeptide=Lus10022815 locus=Lus10022815.g ID=Lus10022815.BGIv1.0 annot-version=v1.0 MSSSSTATIEKCTGDGNVAASGGSSGGGTVNNGGDDEPLVAVEVQNVPPLQIVMLIVGTRGDVQPFVAIGLRLKDYGHRVRLATHSIFKEFVLSAGLEFY PLGGDPKVLIGYMVRNRGFLPSVPSDIPVNRNQMKQIIWSLLPACKEPDIDSGIPFEAEAIIANPPAYGQIHVAEALNIPIHISFIMPWTPTNEFPHPLS RVKQPAAYWLSYQVVDSLIWLGMRDLINDFRKKLLKLRPVTYLTGSQGFSTDLPHAYLWSPHLVPKPKDWGPKVDVVGFCFLDLASNFDPPDELVTWLKA GPKPIYVGFGSLLCKLLQPVEEPEKMTSIIVEALEQTGQRGIINKGWGGLGNLAEPKDFVYLLDNVPHDWLFLQCKAVVHHGGCGTTAAGLKAACPTTII PFFGDQHFWGDRVHARGVGPPPIPVDEFSLLKLVDAIKFMLDPQVKERVVELARAMDDEDGVAGAVTAFFNQLPKRSKSEPARVSKPSSSIGLSFSRCFG CSMIRKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G07020		UGT80A2, SGT	UDP-glucosyl transferase 80A2,...		Lus10022815 [exp]	0	1
AT3G07180			GPI transamidase component PIG...		Lus10022779 [exp]	1.7	0.8344
AT1G25290		ATRBL10	RHOMBOID-like protein 10 (.1.2...		Lus10022969 [exp]	3.5	0.8232
AT4G30900			DNAse I-like superfamily prote...		Lus10022154 [exp]	3.7	0.8386
AT4G28706			pfkB-like carbohydrate kinase ...		Lus10011270 [exp]	3.7	0.8295
AT4G17190		FPS2	farnesyl diphosphate synthase ...		Lus10022545 [exp]	5.7	0.8620
AT5G66030		ATGRIP, GRIP	Golgi-localized GRIP domain-co...		Lus10010676 [exp]	6.2	0.8213
AT3G49645			unknown protein		Lus10002833 [exp]	7.7	0.8201
AT5G28840		GME	"GDP-D-mannose 3',5'-epimerase...		Lus10015915 [exp]	8.8	0.8085
AT4G36290		CRT1	compromised recognition of TCV...		Lus10014276 [exp]	11.0	0.8340
AT4G14965		ATMAPR4	membrane-associated progestero...		Lus10018026 [exp]	13.3	0.8235

Compare expression of checked genes

Lus10022815 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.