Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G04120 2260 / 0 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) AT3G13080 1381 / 0 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) AT3G60160 1354 / 0 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) AT3G13090 1320 / 0 ATMRP8, ATABCC6 ATP-binding cassette C6, multidrug resistance-associated protein 8 (.1) AT3G13100 1291 / 0 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1) AT3G60970 1182 / 0 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1) AT2G47800 1105 / 0 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) AT3G62700 1103 / 0 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) AT3G59140 1095 / 0 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) AT3G21250 1069 / 0 ATMRP6, ABCC8 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024965 [exp] 2173 / 0 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10018027 [exp] 1316 / 0 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10042023 [exp] 1301 / 0 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10013201 [exp] 1157 / 0 AT3G13080 1498 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Lus10027567 [exp] 1126 / 0 AT3G59140 2001 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10039320 [exp] 1120 / 0 AT3G59140 1991 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10004896 [exp] 1053 / 0 AT3G21250 1727 / 0.0 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) Lus10011498 [exp] 1029 / 0 AT2G47800 1796 / 0.0 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) Lus10017548 [exp] 1007 / 0 AT3G59140 1544 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G255800 [exp] 2489 / 0 AT1G04120 2361 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Potri.014G193400 [exp] 2418 / 0 AT1G04120 2323 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Potri.001G362300 [exp] 1426 / 0 AT3G13080 2008 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.014G180100 [exp] 1397 / 0 AT3G60160 1930 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Potri.001G362200 [exp] 1389 / 0 AT3G13080 1952 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197200 [exp] 1347 / 0 AT3G13080 1832 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124606 [exp] 1344 / 0 AT3G13080 1830 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T125806 [exp] 1344 / 0 AT3G13080 1826 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G198401 [exp] 1343 / 0 AT3G13080 1827 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197101 [exp] 1332 / 0 AT3G13080 1862 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0241 [flax] [poplar] ABC_membrane PF00664 [flax] [poplar] ABC_membrane ABC transporter transmembrane region CL0023 [flax] [poplar] P-loop_NTPase PF00005 [flax] [poplar] ABC_tran ABC transporter
Representative CDS sequence Show only first row Show all	>Lus10022858 pacid=23160069 polypeptide=Lus10022858 locus=Lus10022858.g ID=Lus10022858.BGIv1.0 annot-version=v1.0 ATGGGTTCTTCGTATTGGGTGGTTGATAATCACTATTGGCTACCATTTCATCACACTCTCTGGGAAGCAATCCACGGCATTCCCGTCTTGGAACTCACTT CAATTTGCGTCAATTTGACACTCTTTCTGGTGTTCTTGTTGATCATCTTTGCGAGCAAGCTTTCTTTATGTGTTGGAAGGACCAGGCTGCTCAAAGATGA TGCCTCTTCGGTTGCCAGCTCTAGCCCAATTCGACGGGCTAGTATTGTGGATGGAGAGACTCGTGAGATTGTTGTCGGCACTATGTTCAAGTTCTCTTTG TTTTGCTGCTTCTATGTCTTGTTTCTCCAGCTTTTGGTGCTGGGATACGATGGTTTTGTTCTGGTTAGAGATTCGGTTGGTGGGGAAGTCCAGGACTGGA CCGTGCTTTGCTTGCCTGCTTCTCAAGGCTTAACATGGCTTCTCTTGAGCTCTTGGGCTCTTCATTGTAAATTCCACGCATGTGAGAAGTTCCCGGCGCT GCTAAGAATATGGTGGGTGTTCTCATTTCTGATGTGCTTGTGTACTTTGTATGTGGACTGGAGGAGCCTTCTGACGGACGGTTACGGGCATCTGAATGCT ACAGTTGTGGTGAATTTTGCTGCAACACCTGCCATGGCTTTTCTATCTTTTCTTTCGACCAGAGGGGTTACTGGCATAGAAGTTCTGAGAAACTCTGACC TTCAAGAGCCATTGCTTCTGGAAGAAGACCCTGCATGTCTCAGGATAACTCCTTACAGTGATGCTGGGTTCTTTAGCGTGCTCACTCTCTCTTGGTTGAA CCCACTACTGTCCACTGGTGCAAAGAGACCGCTAGAGCTGAAGGACATTCCCTTGCTTGCACCAGAAGATCGAGCGAAAGCCAATTTTAAGCTTTTGAAT TCAAACTGGGAGAAAATGAAGGCTGATAATCCTTCAAAGCAACCTTCTTTAGCTATGGCAATTCTGAAGTCTTTTTGGAGGGAAGCATTTCGTAATGCCA TCTTTGCCCTGTTGAACACTGTTGTCTCTTATGTTGGCCCATACTTGATTAGCTACTTTGTGGAGTATCTGGGAGGGCAGCAGACTTTTCAATATGAGGG GTACATTCTGGCTGGAATATTTTTCTCCGCCAAGCTTGCTGAGACTGTAACGACCCGCCAATGGTATCTTGGGGTTGACATATTAGGCATGCATGTGAGA TCGGCTTTGACTGGCATGGTTTATCGTAAAGGGCTCAAGCTCTCGAGCTTGTCTAAGCAAAGTCATACCAGTGGAGAAATTGTCAACTATATGGCAGTTG ATGTCCAGAGAGTAGGGGATTACTCTTGGTATCTTCACGATATATGGATGCTTCCCTTGCAGATTATATTGGCTCTGGCAATTTTGTATAAGAATGTTGG AATTGCTGCAGGAGCAACTTTACTTGCCACCATCTTCTCTATTGTGGTAACCATTCCTCTTGCTAGGCTGCAAGAAAACTATCAGGACAAACTAATGGCT GCAAAGGATGAAAGAATGAGGAAGACTTCTGAGTGCCTGAGGAACATGAGGATCCTGAAGCTGCAGGCTTGGGAGGATAGGTATCGACTGCAGTTGGAGG AAATGCGGAGTGTGGAATTCAAGTGGCTCCAAAAAGCCCTTTATTCGCAATCCTTCATAACTTTCTTCTTCTGGAGCTCTCCTATATTTGTTGCTGTTGT CACTTTTGGTACTTCTATATTGCTGGGTGGTCAGCTAACAGCTGGAAGCGTGCTTTCATCACTGGCCACTTTCAGAATTCTACAGGAGCCACTCAGAAAC TTCCCTGACTTGGTTTCTATGATGGCCCAGACTAAAGTATCCCTTGATCGACTTTCTACATTCCTGCAAGAGGAAGAGTTGAGCGAAGATGCCACTATTG TGCTACCACGAGGTACAACTCCCTTTGCAATTGAGATTAAAGATGGTGAGTTCTCCTGGACCCCTACGGTTCCAATGCCCACCTTATCGGGGATACAAAT GAAAGTGCAAAAAGGAATGCGTGTAGCTGTTTGTGGAAAAGTTGGCTCTGGTAAATCAAGCTTCCTCTCGTGCATTCTGGGCGAGATACCAAAATTATCT GGTGAAGTGCGAATATGTGGGTCTGCTGCTTATGTTCCCCAGTCTGCTTGGATACAATCTGGAAATATTGAAGAAAATATCCTATTTGGCAGTCCAATGG ACAAGCCCAAGTATAAAGCAGTTATTCATGCTTGTTCACTCAAAAAGGATTTGGAACTTTTCTCACACGGGGATCAGACCATTATTGGGGATCGGGGTAT AAATTTAAGCGGTGGTCAAAAGCAAAGAGTTCAGCTTGCAAGAGCGCTTTATCAAGATGCAGATGTTTATTTGCTTGATGATCCTTTCAGTGCTGTTGAT GCACATACTGGTTCAGAATTGTTTAAGGAATATATATTAACAGCACTAGCAGCTAAAACTGTGATTTATGTGACTCACCAAGTTGAGTTCTTGCCAGCTG CAGATCTAATATTGGTTCTTAAGGAAGGTCAGATTACGCAAGCAGGTAGGTACGAGGAGCTTCTACGAGCAGGAACTGATTTCATCAGTTTGGTCTCTGC TCACCAGGAAGCAATTGGAGCTATGGACATTCCTATTCATTCGACAGACGATTCAGATGACGGTGTAGCTTTGGATGGTCCTATCATGCTTCATAAAAAG TGTGAAGCATCTGTAAGTAATGTTGACAATCTTGCAAAAGAAGTGCAAGAAACTGCAGCTTCTTCTGATCAGAAAGCAGTGAAAGAGAAAAAGAAAGTAA AACGTTCGAGGAAGAAACAGCTTGTTCAAGAGGAGGAAAGGGTTAGGGGAACAGTAAGCATGAAAGTTTATTTGTCATATATGGCTGCAGCATATAAGGG GATGTTGGTTCCCCTCATACTCCTGTCACAAGCACTATTTCAGTTTCTTCAAATAGCTAGTAATTGGTGGATGGCTTGGGCAAATCCCCAGATGGAAGGA GGAGAAGCGAAAGTGAGTCCGATGGTCCTACTTGGTGTTTATATGGCCCTTGCTTTTGGGAGCTCTGTGTTTATACTTTCCAGGGCTGTTTTGGTTGCTA CATTTGGTTTAGCTGCTGCACAGAAGTTGTTTCTGATGATGCTTAGAAGTGTGTTTCGATCGCCTATGTCTTTCTTCGACTCTACTCCAGCTGGACGGAT CTTGAATCGTGTATCTGTTGACCAAAGTGTTGTTGATCTGGATATACCTTTTAGACTCGGTGGCTTTGCTTCAACAACAATACAGCTTATTGGAATCGTT GCTGTAATGACACAAGTGACTTGGCAAATTTTGCTTCTTGTTATTCCAATGGCTGTAGCATGCCTATGGATGCAGAAATACTACATGGCTTCATCAAGGG AACTAGTTCGCATCGTCAGCATCCAGAAGTCTCCTGTCTTCCATCTTTTCAGCGAGTCCATTGCTGGAGCCGCCACTATAAGAGGTTTTGGGCAAGAGAA AAGGTTCATGAAAAGGAATCTTTATCTTCTTGACTGTTTCACTCGCCCGTTCTTCTGCAGTCTGGCGGCTATCGAGTGGCTCTGTCTGCGCATGGAACTA CTGTCAACCTTCGTATTTGCTTTCTGCATGCTTTTGCTCGTAAGCTTTCCCCATGGAAGCATCGACCCAAGTATGGCAGGCCTTGCTGTGACATATGGCC TTAATCTTAATGCTCGTCTGTCACGATGGATACTTAGCTTTTGCAAGGTTGAAAACAAAATAATTTCCATAGAAAGGATATATCAATATAGCAGAATTTC GAGTGAAGCACCAGCAATTATAGAGGAGTCTCGCCCACCGTCCTCATGGCCGGAGAATGGACAAATTGACATAATTGATTTGAAGGTCCGTTATGGTGAG AATCTCCCTATGGTGCTTCATGGGGTATCCTGCAGCTTTCCTGGTGGCAAGAAGATTGGAATTGTTGGGAGAACCGGTAGTGGAAAATCTACACTGATCC AGGCCTTGTTTCGGTTAATCGAACCAGCTGGTGGAAGAATCATTATAGACAACATTGATATTTCAAAGATTGGGCTCCATGATCTTCGTAGCCGCCTCAG TATCATTCCTCAAGATCCAACCTTGTTTGAAGGAACCATTAGGGGAAATCTCGACCCTCTTGAGGAGCACACTGATCAGGAAATCTGGCAGGCTCTAGAT AAGTCTCAACTTGGTGATGTAATCCGGGAGAAAGATGAAAAACTTGATGCCCCAGTTCTAGAAAATGGAGATAACTGGAGCGTGGGACAGAGGCAACTTG TTGCACTAGGGCGTGCGTTGCTCAAACAGGCCAGAATACTGGTACTAGATGAAGCAACCGCATCAGTCGACACGGGGACTGACAATCTTATCCAGAAGAT TATCCGGACAGAGTTCAAGAACTGCACTGTCTGCACAATTGCTCACCGCATCCCAACAGTCATTGACAGTGATCTCGTTTTGGTACTAAGCGACGGTCGT CGCGCTGAGTTTGATACTCCAACTCGGTTGTTAGAGGATAAATCGTCCATGTTCCTAAAACTGGTCACTGAATACTCGTCAAGGTCAAATGGCATACCTG ACTTCTAA
AA sequence Show only first row Show all	>Lus10022858 pacid=23160069 polypeptide=Lus10022858 locus=Lus10022858.g ID=Lus10022858.BGIv1.0 annot-version=v1.0 MGSSYWVVDNHYWLPFHHTLWEAIHGIPVLELTSICVNLTLFLVFLLIIFASKLSLCVGRTRLLKDDASSVASSSPIRRASIVDGETREIVVGTMFKFSL FCCFYVLFLQLLVLGYDGFVLVRDSVGGEVQDWTVLCLPASQGLTWLLLSSWALHCKFHACEKFPALLRIWWVFSFLMCLCTLYVDWRSLLTDGYGHLNA TVVVNFAATPAMAFLSFLSTRGVTGIEVLRNSDLQEPLLLEEDPACLRITPYSDAGFFSVLTLSWLNPLLSTGAKRPLELKDIPLLAPEDRAKANFKLLN SNWEKMKADNPSKQPSLAMAILKSFWREAFRNAIFALLNTVVSYVGPYLISYFVEYLGGQQTFQYEGYILAGIFFSAKLAETVTTRQWYLGVDILGMHVR SALTGMVYRKGLKLSSLSKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIAAGATLLATIFSIVVTIPLARLQENYQDKLMA AKDERMRKTSECLRNMRILKLQAWEDRYRLQLEEMRSVEFKWLQKALYSQSFITFFFWSSPIFVAVVTFGTSILLGGQLTAGSVLSSLATFRILQEPLRN FPDLVSMMAQTKVSLDRLSTFLQEEELSEDATIVLPRGTTPFAIEIKDGEFSWTPTVPMPTLSGIQMKVQKGMRVAVCGKVGSGKSSFLSCILGEIPKLS GEVRICGSAAYVPQSAWIQSGNIEENILFGSPMDKPKYKAVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADVYLLDDPFSAVD AHTGSELFKEYILTALAAKTVIYVTHQVEFLPAADLILVLKEGQITQAGRYEELLRAGTDFISLVSAHQEAIGAMDIPIHSTDDSDDGVALDGPIMLHKK CEASVSNVDNLAKEVQETAASSDQKAVKEKKKVKRSRKKQLVQEEERVRGTVSMKVYLSYMAAAYKGMLVPLILLSQALFQFLQIASNWWMAWANPQMEG GEAKVSPMVLLGVYMALAFGSSVFILSRAVLVATFGLAAAQKLFLMMLRSVFRSPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIV AVMTQVTWQILLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPVFHLFSESIAGAATIRGFGQEKRFMKRNLYLLDCFTRPFFCSLAAIEWLCLRMEL LSTFVFAFCMLLLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKVENKIISIERIYQYSRISSEAPAIIEESRPPSSWPENGQIDIIDLKVRYGE NLPMVLHGVSCSFPGGKKIGIVGRTGSGKSTLIQALFRLIEPAGGRIIIDNIDISKIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHTDQEIWQALD KSQLGDVIREKDEKLDAPVLENGDNWSVGQRQLVALGRALLKQARILVLDEATASVDTGTDNLIQKIIRTEFKNCTVCTIAHRIPTVIDSDLVLVLSDGR RAEFDTPTRLLEDKSSMFLKLVTEYSSRSNGIPDF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G04120		ATABCC5, ABCC5,...	MULTIDRUG RESISTANCE PROTEIN 5...		Lus10022858 [exp]	0	1
AT1G04120		ATABCC5, ABCC5,...	MULTIDRUG RESISTANCE PROTEIN 5...		Lus10024965 [exp]	1.0	0.9330
AT4G29900		CIF1, ATACA10, ...	COMPACT INFLORESCENCE 1, autoi...		Lus10001638 [exp]	1.4	0.9302
AT4G15840			BTB/POZ domain-containing prot...		Lus10002873 [exp]	2.2	0.8881
AT2G42520			P-loop containing nucleoside t...		Lus10016207 [exp]	4.1	0.8594
AT1G67960		POD1	POLLEN DEFECTIVE IN GUIDANCE 1...		Lus10033013 [exp]	6.6	0.8315
AT1G61850			phospholipases;galactolipases ...		Lus10018349 [exp]	6.7	0.9099
AT1G04200			unknown protein		Lus10006619 [exp]	7.0	0.8815
AT4G30020			PA-domain containing subtilase...		Lus10006973 [exp]	9.7	0.8568
AT1G19835			Plant protein of unknown funct...		Lus10024324 [exp]	11.0	0.8911
AT5G47490			RGPR-related (.1)		Lus10004721 [exp]	13.5	0.8643

Compare expression of checked genes

Lus10022858 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.