Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G54700 156 / 1e-45 PHT1;7 phosphate transporter 1;7 (.1) AT2G38940 155 / 2e-45 PHT1;4, ATPT2 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) AT5G43360 147 / 1e-42 PHT1;3, ATPT4, PHT3 PHOSPHATE TRANSPORTER 3, phosphate transporter 1;3 (.1) AT5G43350 145 / 8e-42 PHT1;1, ATPT1 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 1, phosphate transporter 1;1 (.1) AT5G43370 144 / 3e-41 PHT1;2, APT1, PHT2 ARABIDOPSIS PHOSPHATE TRANSPORTER 1, phosphate transporter 2 (.1.2) AT2G32830 137 / 9e-39 PHT1;5, PHT5 PHOSPHATE TRANSPORTER 5, phosphate transporter 1;5 (.1) AT5G43340 134 / 2e-37 PHT1;6, PHT6 PHOSPHATE TRANSPORTER 6, phosphate transporter 1;6 (.1) AT4G08895 97 / 6e-26 inorganic phosphate transporter family protein (.1) AT1G20860 79 / 2e-17 PHT1;8 phosphate transporter 1;8 (.1) AT1G76430 76 / 1e-16 PHT1;9 phosphate transporter 1;9 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033886 [exp] 159 / 1e-46 AT3G54700 919 / 0.0 phosphate transporter 1;7 (.1) Lus10003560 [exp] 157 / 4e-46 AT3G54700 919 / 0.0 phosphate transporter 1;7 (.1) Lus10014754 [exp] 154 / 7e-45 AT2G38940 904 / 0.0 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) Lus10011826 [exp] 150 / 2e-43 AT5G43360 868 / 0.0 PHOSPHATE TRANSPORTER 3, phosphate transporter 1;3 (.1) Lus10021191 [exp] 149 / 6e-43 AT5G43350 858 / 0.0 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 1, phosphate transporter 1;1 (.1) Lus10016635 [exp] 144 / 3e-41 AT3G54700 888 / 0.0 phosphate transporter 1;7 (.1) Lus10024884 [exp] 96 / 5e-26 AT2G38940 215 / 1e-68 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) Lus10022548 [exp] 99 / 8e-25 AT3G54700 578 / 0.0 phosphate transporter 1;7 (.1) Lus10027575 [exp] 99 / 1e-24 AT5G43360 622 / 0.0 PHOSPHATE TRANSPORTER 3, phosphate transporter 1;3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G223600 [exp] 155 / 3e-45 AT3G54700 856 / 0.0 phosphate transporter 1;7 (.1) Potri.010G071500 [exp] 152 / 2e-44 AT2G38940 794 / 0.0 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) Potri.002G038900 [exp] 152 / 3e-44 AT3G54700 823 / 0.0 phosphate transporter 1;7 (.1) Potri.010G071700 [exp] 152 / 3e-44 AT2G38940 764 / 0.0 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) Potri.010G071600 [exp] 150 / 2e-43 AT2G38940 762 / 0.0 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) Potri.010G072000 [exp] 149 / 8e-43 AT2G38940 765 / 0.0 ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2, phosphate transporter 1;4 (.1) Potri.005G175700 [exp] 142 / 2e-40 AT3G54700 699 / 0.0 phosphate transporter 1;7 (.1) Potri.005G175500 [exp] 142 / 3e-40 AT3G54700 728 / 0.0 phosphate transporter 1;7 (.1) Potri.001G318500 [exp] 141 / 5e-40 AT2G32830 813 / 0.0 PHOSPHATE TRANSPORTER 5, phosphate transporter 1;5 (.1) Potri.015G022800 [exp] 95 / 4e-23 AT5G43360 598 / 0.0 PHOSPHATE TRANSPORTER 3, phosphate transporter 1;3 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10022934 pacid=23159895 polypeptide=Lus10022934 locus=Lus10022934.g ID=Lus10022934.BGIv1.0 annot-version=v1.0 ATGACGACTGCCTGGTTCCTCCTCGACATTGCATTCTATAACCAGAATCTGTTTCAAAAGGACATTTTCAGCGCGGTGGGGGGGATTCCTCCAGCAAAGA GGATGAATGCGATCGAGGAGGTTTTCAGGATCGCGAGAGCTCAGACGCTAATCGCCATTTGCAGCACAGTGCCCGGTTACTGGTTCACGGACCACTGGAC TCTCAAGGAGAATCCAATCGGGTTCGTGGTCCTGTACGCGCTGACGTTCTTCCTTGCAAACTTTGGGCCTAATGCGATGACATTTGTTGTTCGGCTGAGA TTTTCCCCACCAGGGTTATCCGGCGGGGATTGGAGTGAAGAATTCGGTGATTGTTTTGGGGGTTGTGAATTTGCTGGGGATGGGGTATACATTTCTTGCG CCGGAGTCGAAAGGGAAGGTCTTTGGAAGAAATGTCCGGCGAGAGAAATTAACACTGCCACTGTTCCAGTAGTTGCTTAG
AA sequence Show only first row Show all	>Lus10022934 pacid=23159895 polypeptide=Lus10022934 locus=Lus10022934.g ID=Lus10022934.BGIv1.0 annot-version=v1.0 MTTAWFLLDIAFYNQNLFQKDIFSAVGGIPPAKRMNAIEEVFRIARAQTLIAICSTVPGYWFTDHWTLKENPIGFVVLYALTFFLANFGPNAMTFVVRLR FSPPGLSGGDWSEEFGDCFGGCEFAGDGVYISCAGVEREGLWKKCPAREINTATVPVVA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G54700		PHT1;7	phosphate transporter 1;7 (.1)		Lus10022934 [exp]	0	1
AT1G01280		CYP703A2	"cytochrome P450, family 703, ...		Lus10010119 [exp]	3.2	0.9572
AT3G18990	B3	REM39, VRN1	REDUCED VERNALIZATION RESPONSE...		Lus10021007 [exp]	3.6	0.8672
AT1G45616		AtRLP6	receptor like protein 6 (.1)		Lus10005050 [exp]	4.0	0.8484
AT5G39130			RmlC-like cupins superfamily p...		Lus10015129 [exp]	4.5	0.9572
AT5G07830		ATGUS2	glucuronidase 2 (.1)		Lus10037110 [exp]	4.7	0.7592
AT5G01180		ATPTR5	ARABIDOPSIS THALIANA PEPTIDE T...		Lus10017177 [exp]	5.5	0.9572
					Lus10017294 [exp]	6.3	0.9572
AT4G04960			Concanavalin A-like lectin pro...		Lus10039837 [exp]	7.1	0.9572
AT1G52820			2-oxoglutarate (2OG) and Fe(II...		Lus10005516 [exp]	7.3	0.8342
AT3G60730			Plant invertase/pectin methyle...		Lus10009287 [exp]	7.7	0.8044

Compare expression of checked genes

Lus10022934 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.